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Details for NP_442961.1_7

Name NP_442961.1_7
Length 20
Regular expression [GC][TG][GA]AT[CA][AG]CCGC[CT][GA]C[CT]GAGTG
Central No

Motif logo

Genes containing this motif

37 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Reverse -106 -125 17.8957 0.0881
sll0703 Reverse -127 -146 7.86593 0.263
slr0741 Reverse -351 -370 8.06259 0.263
sll1682 Reverse -234 -253 10.1275 0.263
sll0654 Forward -67 -48 7.86593 0.263
slr0676 Reverse -260 -279 7.86593 0.263
slr2009 Forward -85 -66 10.5209 0.263
ssr2009 Reverse -207 -226 10.1275 0.263
slr1205 Reverse -235 -254 10.3242 0.263
sll1716 Reverse -109 -128 10.2259 0.263
slr1550 Forward -208 -189 8.16093 0.263
slr1407 Reverse -192 -211 15.0441 0.194
ssl3379 Reverse -270 -289 7.96426 0.263
slr1256 Forward -195 -176 12.7825 0.245
sll1879 Forward -225 -206 12.5858 0.245
slr1678 Reverse -342 -361 10.7175 0.263
ssl0483 Forward -302 -283 9.93088 0.263
slr0292 Reverse -37 -56 9.93088 0.263
sll0167 Reverse -216 -235 7.17762 0.289
sml0001 Forward -330 -311 12.8808 0.245
slr0769 Forward -301 -282 7.86593 0.263
sll0312 Forward -249 -230 7.66927 0.271
ssl0769 Reverse -315 -334 10.4225 0.263
sll0602 Reverse -90 -109 7.86593 0.263
slr0645 Forward -41 -22 7.86593 0.263
ssr0330 Forward -374 -355 8.75091 0.263
slr0897 Reverse -366 -385 7.86593 0.263
sgl0001 Forward -108 -89 9.73422 0.263
slr0090 Forward -233 -214 9.24257 0.263
sll0588 Reverse -325 -344 7.17762 0.289
slr0316 Forward -122 -103 9.43923 0.263
sll0899 Reverse -15 -34 7.07928 0.289
ssr1562 Forward -228 -209 7.07928 0.289
sll1549 Reverse -349 -368 22.7139 0.0194
slr1655 Forward -156 -137 22.7139 0.0194
slr0608 Forward -33 -14 14.5524 0.194
sll8031 Reverse -358 -377 9.53756 0.263
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.250  0.750  0.000  
0.125 0.125 0.250 0.500
0.250 0.000 0.750 0.000
1.000 0.000 0.000 0.000
0.125 0.000 0.000 0.875
0.250 0.625 0.000 0.125
0.625 0.000 0.375 0.000
0.125 0.875 0.000 0.000
0.125 0.750 0.125 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.500 0.000 0.500
0.250 0.000 0.750 0.000
0.000 0.750 0.125 0.125
0.000 0.625 0.000 0.375
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.000 0.125 0.750 0.125
0.125 0.000 0.000 0.875
0.000 0.000 1.000 0.000