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Details for NP_442941.1_5

Name NP_442941.1_5
Length 15
Regular expression [TG]T[CTG]T[CG][CG][CA][AT][AG]TT[CG][TC][TC]T
Central Yes

Motif logo

Genes containing this motif

75 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1490 Reverse -304 -318 14.6205 0.279
sll1401 Forward -332 -318 16.8168 0.221
sll1058 Forward -107 -93 15.5754 0.258
ssr3000 Reverse -68 -82 17.3897 0.181
sll1201 Forward -62 -48 17.3897 0.181
slr1291 Reverse -164 -178 17.3897 0.181
slr1070 Reverse -47 -61 15.5754 0.258
sll1515 Reverse -284 -298 15.9573 0.238
slr1597 Forward -59 -45 15.9573 0.238
sll1510 Forward -336 -322 16.0528 0.238
slr1906 Reverse -209 -223 17.1987 0.189
slr1916 Forward -80 -66 15.3844 0.258
slr1916 Reverse -3 -17 14.716 0.272
slr1215 Forward -94 -80 15.8619 0.248
sll1747 Reverse -306 -320 16.4348 0.237
slr1748 Forward -236 -222 15.0024 0.272
sll1688 Forward -360 -346 15.9573 0.238
slr1820 Reverse -15 -29 15.9573 0.238
slr1740 Forward -15 -1 14.334 0.293
slr1993 Forward -365 -351 15.1934 0.27
ssl3769 Forward -246 -232 16.4348 0.237
slr2127 Reverse -299 -313 14.334 0.293
slr0810 Forward -121 -107 14.525 0.279
sll0812 Forward -249 -235 15.5754 0.258
ssr1386 Reverse -213 -227 15.5754 0.258
sll0808 Forward -68 -54 14.8115 0.272
slr0821 Reverse -353 -367 14.8115 0.272
sll0804 Forward -68 -54 15.2889 0.27
sll0803 Forward -82 -68 15.2889 0.27
sll1256 Forward -311 -297 14.716 0.272
slr1338 Reverse -108 -122 14.716 0.272
sll1885 Reverse -85 -99 14.2385 0.298
slr1974 Forward -93 -79 14.2385 0.298
sll1876 Reverse -88 -102 19.0131 0.0751
sll1446 Forward -277 -263 14.334 0.293
sll1094 Reverse -339 -353 14.525 0.279
sll1092 Forward -374 -360 15.7664 0.248
ssl2138 Forward -168 -154 15.7664 0.248
sll1561 Forward -101 -87 14.8115 0.272
slr1681 Reverse -249 -263 14.8115 0.272
slr1647 Reverse -196 -210 18.4401 0.115
slr0408 Forward -138 -124 14.6205 0.279
sll0141 Reverse -191 -205 14.9069 0.272
slr0161 Forward -203 -189 14.9069 0.272
slr0181 Reverse -18 -32 16.8168 0.221
slr0181 Reverse -7 -21 15.0024 0.272
slr0384 Reverse -344 -358 17.3897 0.181
sll0051 Reverse -128 -142 19.0131 0.0751
slr0070 Forward -86 -72 19.0131 0.0751
sll0601 Reverse -363 -377 14.525 0.279
slr0649 Forward -22 -8 14.525 0.279
sll0370 Forward -288 -274 16.4348 0.237
sll0829 Reverse -216 -230 15.0024 0.272
sll0827 Forward -174 -160 19.0131 0.0751
slr0841 Reverse -93 -107 19.0131 0.0751
slr0514 Reverse -61 -75 14.2385 0.298
slr0318 Forward -288 -274 15.3844 0.258
slr0701 Reverse -96 -110 16.2438 0.238
slr0526 Reverse -162 -176 14.9069 0.272
sll0506 Reverse -141 -155 15.9573 0.238
slr0543 Forward -27 -13 17.1032 0.194
sll1341 Reverse -176 -190 15.4799 0.258
slr1426 Forward -379 -365 15.4799 0.258
slr1565 Forward -34 -20 15.1934 0.27
slr1566 Forward -384 -370 15.1934 0.27
sll1482 Reverse -206 -220 17.1032 0.194
slr0755 Forward -126 -112 16.5303 0.237
slr0459 Reverse -40 -54 14.334 0.293
slr5055 Forward -182 -168 14.2385 0.298
sll5123 Reverse -147 -161 15.8619 0.248
slr7011 Forward -355 -341 14.2385 0.298
slr6028 Reverse -332 -346 19.0131 0.0751
slr6028 Forward -330 -316 14.6205 0.279
slr6042 Reverse -121 -135 15.1934 0.27
slr6045 Forward -221 -207 18.1536 0.135
sll6054 Reverse -142 -156 17.7717 0.18
slr6087 Reverse -332 -346 19.0131 0.0751
slr6087 Forward -330 -316 14.6205 0.279
6803t07 Reverse -132 -146 16.1483 0.238
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.100  0.200  0.700  
0.000 0.000 0.000 1.000
0.100 0.400 0.200 0.300
0.000 0.100 0.000 0.900
0.100 0.600 0.300 0.000
0.100 0.700 0.200 0.000
0.300 0.600 0.000 0.100
0.700 0.000 0.000 0.300
0.700 0.000 0.200 0.100
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.600 0.300 0.100
0.100 0.200 0.000 0.700
0.000 0.400 0.000 0.600
0.100 0.000 0.000 0.900