Your browser is old and dusty. Try Google Chrome!

Details for NP_442917.1_1

Name NP_442917.1_1
Length 20
Regular expression AATC[TA]TAA[AG]AAA[GA][TC][AC]T[TA][AT]A[GA]
Central Yes

Motif logo

Genes containing this motif

157 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1397 Forward -97 -78 7.27514 0.254
sll1063 Forward -44 -25 11.8967 0.175
slr1119 Reverse -181 -200 11.8967 0.175
sll1062 Forward -24 -5 6.98015 0.254
sll1053 Reverse -25 -44 7.96345 0.254
slr1123 Forward -244 -225 7.96345 0.254
sll0217 Forward -120 -101 6.09517 0.283
slr0257 Reverse -261 -280 6.09517 0.283
slr1094 Forward -274 -255 7.57013 0.254
sll1039 Reverse -72 -91 7.17681 0.254
slr1095 Forward -110 -91 7.17681 0.254
sll1185 Reverse -32 -51 7.4718 0.254
slr1616 Forward -363 -344 9.93006 0.184
sll0654 Forward -156 -137 10.2251 0.181
slr0676 Reverse -171 -190 10.2251 0.181
slr1593 Forward -66 -47 19.1731 0.03
slr1593 Reverse -44 -63 18.5831 0.03
slr1593 Reverse -77 -96 14.9449 0.101
sll1515 Forward -184 -165 6.1935 0.28
slr1597 Reverse -159 -178 6.1935 0.28
slr1764 Reverse -189 -208 7.17681 0.254
slr1847 Reverse -23 -42 7.96345 0.254
ssr3129 Forward -21 -2 8.4551 0.254
slr2036 Reverse -291 -310 12.29 0.175
slr2037 Forward -274 -255 10.2251 0.181
slr2038 Reverse -356 -375 10.2251 0.181
slr1908 Forward -359 -340 7.27514 0.254
sll1830 Forward -96 -77 18.4848 0.03
slr1919 Reverse -51 -70 18.4848 0.03
sll1291 Forward -98 -79 10.52 0.181
ssr2848 Reverse -348 -367 7.27514 0.254
slr1215 Forward -117 -98 12.88 0.16
sll1742 Forward -108 -89 6.78348 0.259
slr1842 Forward -31 -12 6.39016 0.275
sll1143 Forward -156 -137 11.995 0.175
ssr2062 Reverse -250 -269 8.75009 0.245
slr0890 Forward -89 -70 11.405 0.181
sll1307 Reverse -203 -222 10.1267 0.181
sll1784 Reverse -161 -180 6.39016 0.275
slr1871 Forward -200 -181 9.7334 0.192
sll2012 Forward -208 -189 18.7798 0.03
sll2012 Reverse -196 -215 10.3234 0.181
ssl3829 Reverse -90 -109 5.89851 0.29
slr2141 Forward -348 -329 5.89851 0.29
sll1621 Forward -136 -117 10.0284 0.181
slr1738 Reverse -175 -194 10.0284 0.181
sll1162 Forward -41 -22 6.68515 0.263
slr1251 Reverse -110 -129 7.27514 0.254
ssr2087 Forward -251 -232 6.88182 0.254
sll1592 Reverse -249 -268 9.24175 0.213
sll1590 Reverse -175 -194 8.25844 0.254
slr1728 Forward -164 -145 8.25844 0.254
slr0261 Forward -292 -273 7.76679 0.254
sll0247 Reverse -256 -275 10.6184 0.181
slr0267 Forward -254 -235 10.6184 0.181
sll0237 Forward -115 -96 5.80018 0.297
sll1997 Forward -254 -235 7.86512 0.254
slr2111 Reverse -273 -292 7.86512 0.254
slr2120 Forward -128 -109 10.52 0.181
sll1236 Reverse -35 -54 13.175 0.149
sll1236 Reverse -161 -180 10.7167 0.181
slr1325 Forward -336 -317 13.175 0.149
slr1325 Forward -210 -191 10.7167 0.181
sll1233 Reverse -46 -65 7.07848 0.254
ssr2227 Forward -236 -217 10.6184 0.181
sll1256 Reverse -310 -329 7.66846 0.254
slr1338 Forward -109 -90 7.66846 0.254
sll1251 Forward -382 -363 6.48849 0.272
ssl2471 Forward -53 -34 6.48849 0.272
sll1898 Forward -81 -62 20.9431 0.0253
slr1959 Reverse -169 -188 20.9431 0.0253
sll1871 Forward -35 -16 7.27514 0.254
slr1982 Reverse -149 -168 7.27514 0.254
sll1376 Forward -32 -13 7.27514 0.254
slr1152 Forward -127 -108 12.29 0.175
sll1089 Reverse -252 -271 7.76679 0.254
sll1560 Reverse -250 -269 7.76679 0.254
slr1684 Forward -391 -372 7.76679 0.254
sll1533 Forward -163 -144 18.1898 0.03
slr1636 Forward -219 -200 10.2251 0.181
slr1638 Reverse -178 -197 7.76679 0.254
sll0267 Forward -184 -165 5.99684 0.29
slr0407 Forward -275 -256 9.63507 0.193
slr1938 Reverse -85 -104 6.29183 0.275
sll0947 Forward -323 -304 14.5516 0.102
slr0994 Reverse -124 -143 14.5516 0.102
slr0377 Forward -268 -249 7.27514 0.254
sll0327 Forward -198 -179 5.89851 0.29
slr0386 Reverse -118 -137 5.89851 0.29
sll0757 Forward -270 -251 18.1898 0.03
smr0001 Reverse -1 -20 18.1898 0.03
slr0780 Reverse -250 -269 18.1898 0.03
slr0345 Reverse -47 -66 6.88182 0.254
sll0321 Forward -362 -343 9.34008 0.208
sll0320 Reverse -4 -23 6.88182 0.254
slr0352 Reverse -316 -335 10.2251 0.181
slr0013 Reverse -6 -25 10.0284 0.181
sll0005 Forward -29 -10 10.3234 0.181
slr0020 Reverse -159 -178 10.3234 0.181
slr0217 Forward -121 -102 16.8132 0.0493
sll0688 Forward -40 -21 9.83173 0.188
sll0688 Reverse -332 -351 8.35677 0.254
sll0601 Forward -382 -363 7.07848 0.254
sll0601 Forward -204 -185 6.29183 0.275
slr0649 Reverse -3 -22 7.07848 0.254
slr0649 Reverse -181 -200 6.29183 0.275
ssl0750 Reverse -68 -87 10.52 0.181
ssr0693 Forward -75 -56 10.52 0.181
sll0182 Forward -284 -265 11.11 0.181
sll0181 Reverse -47 -66 7.4718 0.254
sll0179 Reverse -335 -354 6.88182 0.254
slr0917 Reverse -1 -20 12.0933 0.175
ssr0871 Forward -65 -46 11.8967 0.175
slr0511 Forward -279 -260 11.8967 0.175
slr0099 Forward -70 -51 11.8967 0.175
sll0095 Forward -283 -264 13.7649 0.128
slr0115 Forward -128 -109 6.39016 0.275
ssl0172 Forward -391 -372 7.76679 0.254
slr0786 Reverse -97 -116 7.76679 0.254
sll0793 Reverse -76 -95 6.88182 0.254
sll0672 Reverse -67 -86 9.53674 0.197
slr0708 Reverse -138 -157 9.63507 0.193
sll0665 Reverse -94 -113 6.78348 0.259
slr0709 Reverse -290 -309 7.27514 0.254
ssl1263 Forward -315 -296 8.65176 0.25
sll0027 Reverse -70 -89 6.98015 0.254
sll0899 Reverse -95 -114 10.3234 0.181
ssr1562 Forward -148 -129 10.3234 0.181
sll1334 Reverse -91 -110 6.58682 0.268
slr1429 Forward -221 -202 6.58682 0.268
sll1330 Reverse -90 -109 19.0748 0.03
sll1476 Reverse -130 -149 30.9728 0.00000451
slr1583 Forward -52 -33 30.9728 0.00000451
sll1475 Forward -274 -255 10.2251 0.181
slr1585 Forward -146 -127 7.27514 0.254
ssl1378 Forward -37 -18 6.09517 0.283
ssr1256 Forward -268 -249 7.27514 0.254
ssr1256 Reverse -246 -265 6.68515 0.263
slr1651 Forward -109 -90 8.94676 0.232
slr1652 Forward -199 -180 7.4718 0.254
sll0450 Reverse -141 -160 14.4533 0.102
sll0450 Forward -163 -144 6.29183 0.275
slr0449 Forward -39 -20 23.7947 0.00687
slr0449 Forward -286 -267 14.4533 0.102
slr0449 Reverse -264 -283 6.29183 0.275
sll0447 Forward -306 -287 7.96345 0.254
sll1108 Forward -203 -184 10.52 0.181
slr1181 Reverse -254 -273 10.52 0.181
slr0591 Forward -212 -193 10.1267 0.181
slr5005 Reverse -47 -66 7.17681 0.254
ssl5007 Forward -91 -72 7.86512 0.254
slr5012 Forward -90 -71 8.16011 0.254
slr5024 Reverse -130 -149 5.89851 0.29
ssl5091 Forward -91 -72 7.86512 0.254
ssr5092 Reverse -281 -300 7.86512 0.254
slr5111 Reverse -41 -60 7.37347 0.254
sll5130 Forward -274 -255 10.2251 0.181
ssl7004 Forward -368 -349 10.3234 0.181
sll7067 Forward -198 -179 19.0748 0.03
slr7068 Reverse -129 -148 19.0748 0.03
sll7090 Forward -122 -103 6.88182 0.254
slr7091 Reverse -2 -21 6.88182 0.254
slr7092 Reverse -367 -386 6.88182 0.254
ssr6002 Forward -91 -72 7.86512 0.254
slr6041 Reverse -188 -207 7.07848 0.254
slr6045 Reverse -148 -167 17.2065 0.0439
ssl6061 Reverse -225 -244 7.86512 0.254
ssr6062 Forward -91 -72 7.86512 0.254
slr6106 Forward -274 -255 10.2251 0.181
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

1.000  0.000  0.000  0.000  
0.944 0.000 0.000 0.056
0.056 0.056 0.111 0.778
0.000 1.000 0.000 0.000
0.222 0.000 0.000 0.778
0.167 0.000 0.056 0.778
0.889 0.000 0.000 0.111
1.000 0.000 0.000 0.000
0.611 0.000 0.389 0.000
0.778 0.000 0.111 0.111
0.833 0.000 0.000 0.167
0.889 0.000 0.000 0.111
0.278 0.111 0.500 0.111
0.056 0.222 0.000 0.722
0.611 0.278 0.111 0.000
0.000 0.000 0.056 0.944
0.278 0.000 0.000 0.722
0.722 0.000 0.000 0.278
1.000 0.000 0.000 0.000
0.278 0.000 0.667 0.056