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Details for NP_442887.1_5

Name NP_442887.1_5
Length 20
Regular expression AT[GT]CCGACAAC[CT]TTG[CG]CCAT
Central No

Motif logo

Genes containing this motif

244 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0612 Forward -68 -49 -10.3253 0.264
slr0612 Reverse -168 -187 -12.4886 0.281
slr1312 Forward -260 -241 -10.3253 0.264
sll1205 Reverse -172 -191 -12.1936 0.281
sll1405 Reverse -105 -124 -9.63698 0.264
sll1393 Forward -366 -347 -13.0786 0.281
sll0702 Forward -294 -275 -12.7836 0.281
slr0742 Forward -142 -123 -9.24366 0.264
slr0742 Reverse -361 -380 -10.227 0.264
slr0743 Reverse -181 -200 -14.4552 0.294
slr1101 Reverse -210 -229 -6.78538 0.264
sll1035 Forward -184 -165 -12.9802 0.281
slr1106 Reverse -51 -70 -12.9802 0.281
slr1107 Reverse -169 -188 -11.9969 0.279
sll1667 Reverse -286 -305 -7.86702 0.264
slr1796 Forward -393 -374 -7.86702 0.264
slr1301 Forward -93 -74 -14.3569 0.294
slr1303 Forward -316 -297 -12.0953 0.281
sll1188 Reverse -153 -172 -11.8986 0.275
slr1307 Forward -208 -189 -13.9635 0.293
slr0962 Reverse -218 -237 -1.67217 0.264
slr0965 Forward -86 -67 -13.3736 0.293
slr0969 Forward -289 -270 -10.1286 0.264
sll0928 Reverse -199 -218 -12.3902 0.281
sll0928 Forward -230 -211 -14.3569 0.294
slr0980 Forward -113 -94 -13.0786 0.281
slr1614 Reverse -41 -60 -9.44032 0.264
slr1063 Reverse -67 -86 -5.21209 0.264
ssr1765 Forward -344 -325 -6.09707 0.264
slr1079 Forward -49 -30 -11.8003 0.27
sll1024 Forward -267 -248 -9.83364 0.264
slr1400 Reverse -245 -264 -13.0786 0.281
slr0676 Forward -373 -354 -10.6203 0.264
slr0678 Reverse -148 -167 -10.227 0.264
slr0680 Forward -231 -212 -9.93197 0.264
slr0692 Forward -350 -331 -13.5702 0.293
slr1048 Forward -366 -347 -11.6036 0.264
sll1004 Reverse -194 -213 -8.94866 0.264
sll1643 Reverse -299 -318 -11.8003 0.27
sll1643 Forward -31 -12 -12.0953 0.281
slr1762 Reverse -213 -232 -12.0953 0.281
sll1641 Reverse -5 -24 -13.0786 0.281
ssr2962 Forward -153 -134 -13.0786 0.281
slr1767 Forward -374 -355 -13.0786 0.281
slr1770 Reverse -350 -369 -13.4719 0.293
sll1932 Forward -325 -306 -9.24366 0.264
slr1020 Reverse -206 -225 -14.1602 0.293
slr1385 Reverse -228 -247 -9.14533 0.264
slr1391 Forward -233 -214 -13.5702 0.293
slr1137 Forward -229 -210 -11.8986 0.275
sll1078 Forward -185 -166 -10.817 0.264
slr1150 Forward -259 -240 -10.9153 0.264
ssl3446 Forward -116 -97 -13.4719 0.293
sml0006 Reverse -237 -256 -9.53865 0.264
sll1812 Forward -299 -280 -10.227 0.264
slr1897 Reverse -281 -300 -12.1936 0.281
slr1201 Reverse -174 -193 -11.8003 0.27
slr2074 Forward -158 -139 -11.9969 0.279
ssl3712 Forward -143 -124 -11.2103 0.264
sll1721 Forward -397 -378 -13.8652 0.293
slr1550 Forward -151 -132 -12.8819 0.281
sll1453 Reverse -220 -239 -9.93197 0.264
slr1239 Forward -277 -258 -12.4886 0.281
slr1239 Reverse -223 -242 -13.6686 0.293
slr1437 Reverse -170 -189 -13.0786 0.281
sll1352 Forward -229 -210 -11.1119 0.264
sll1277 Reverse -115 -134 -5.9004 0.264
sll1274 Reverse -128 -147 -5.9004 0.264
sll0875 Reverse -61 -80 -12.9802 0.281
slr0876 Forward -128 -109 -12.9802 0.281
sll0867 Reverse -175 -194 -13.7669 0.293
sll0862 Reverse -289 -308 -0.4922 0.264
sll1785 Forward -265 -246 -11.8003 0.27
slr1860 Reverse -200 -219 -13.7669 0.293
slr1871 Reverse -260 -279 -9.047 0.264
slr1888 Forward -314 -295 -10.3253 0.264
sll2007 Forward -330 -311 -11.1119 0.264
sll2005 Forward -58 -39 -10.0303 0.264
sll2002 Reverse -365 -384 0.786102 0.264
sll1704 Reverse -86 -105 -2.65548 0.264
slr1822 Forward -336 -317 -12.0953 0.281
sll1629 Reverse -202 -221 -13.7669 0.293
sll1626 Forward -241 -222 -10.3253 0.264
sll0847 Forward -177 -158 -13.1769 0.286
sll1150 Reverse -36 -55 -11.2103 0.264
slr1253 Forward -106 -87 -11.2103 0.264
slr1261 Reverse -78 -97 -5.01543 0.264
sll1961 Reverse -13 -32 -11.8986 0.275
sll1959 Forward -354 -335 -11.9969 0.279
slr2060 Reverse -184 -203 -12.4886 0.281
sll1909 Reverse -106 -125 -11.2103 0.264
sll1606 Reverse -266 -285 -13.0786 0.281
sll1590 Forward -58 -39 -13.0786 0.281
slr1728 Reverse -281 -300 -13.0786 0.281
ssr2912 Reverse -294 -313 -12.2919 0.281
ssl0467 Forward -193 -174 -11.9969 0.279
sll0250 Forward -397 -378 -14.2585 0.294
ssl0461 Forward -133 -114 -14.2585 0.294
slr2094 Reverse -219 -238 -12.3902 0.281
slr2098 Reverse -127 -146 -13.0786 0.281
sll1423 Forward -314 -295 -12.6852 0.281
slr1506 Reverse -121 -140 -12.6852 0.281
slr2124 Forward -298 -279 -10.1286 0.264
sll1994 Reverse -310 -329 -10.6203 0.264
slr2130 Forward -101 -82 -10.6203 0.264
slr2131 Forward -296 -277 -11.6036 0.264
sll1231 Reverse -112 -131 -13.7669 0.293
slr0804 Reverse -126 -145 -4.72043 0.264
slr0807 Reverse -224 -243 -12.9802 0.281
ssl2471 Forward -112 -93 -3.24547 0.264
sll1244 Reverse -78 -97 -10.7186 0.264
slr1353 Forward -104 -85 -10.7186 0.264
slr1957 Forward -180 -161 -10.9153 0.264
sll1871 Forward -212 -193 -13.6686 0.293
sll1869 Forward -266 -247 -5.31042 0.264
sll1868 Forward -232 -213 -10.3253 0.264
slr1471 Forward -44 -25 -1.67217 0.264
sll1377 Reverse -308 -327 -13.6686 0.293
slr1272 Forward -327 -308 -11.6036 0.264
slr1288 Forward -143 -124 -14.1602 0.293
ssl2162 Forward -376 -357 -4.81876 0.264
sll1087 Forward -349 -330 -12.4886 0.281
sll1557 Forward -181 -162 -9.73531 0.264
slr1689 Forward -90 -71 -10.0303 0.264
sll0921 Forward -41 -22 -13.3736 0.293
slr0937 Reverse -21 -40 -13.0786 0.281
sll0915 Reverse -55 -74 -11.5053 0.264
slr0940 Forward -106 -87 -11.5053 0.264
slr0950 Reverse -316 -335 -11.4069 0.264
sll1531 Forward -57 -38 -9.73531 0.264
sll1528 Forward -67 -48 -0.4922 0.264
sll1521 Forward -342 -323 -9.63698 0.264
slr0448 Reverse -362 -381 -12.2919 0.281
sll0269 Forward -338 -319 -12.3902 0.281
sll0257 Forward -26 -7 -5.01543 0.264
slr0293 Reverse -154 -173 -5.01543 0.264
sll0364 Forward -268 -249 -10.3253 0.264
sll0364 Reverse -168 -187 -11.5053 0.264
slr1950 Reverse -42 -61 -13.1769 0.286
slr0329 Forward -225 -206 -11.8986 0.275
slr0171 Reverse -66 -85 -11.8003 0.27
sll0170 Forward -135 -116 -11.8003 0.27
sll0167 Forward -288 -269 -12.6852 0.281
ssl0294 Reverse -358 -377 -13.8652 0.293
slr0362 Reverse -94 -113 -10.227 0.264
slr0377 Forward -77 -58 -14.0619 0.293
slr0380 Reverse -4 -23 -14.4552 0.294
sll0772 Reverse -3 -22 -10.9153 0.264
sll0755 Forward -54 -35 -14.3569 0.294
sll0322 Reverse -289 -308 -14.4552 0.294
sll0321 Reverse -53 -72 -11.4069 0.264
slr0347 Forward -86 -67 -11.4069 0.264
slr0357 Reverse -192 -211 -12.8819 0.281
slr0018 Reverse -192 -211 -14.1602 0.293
slr0213 Forward -123 -104 -14.1602 0.293
slr0233 Reverse -288 -307 -10.9153 0.264
sll0403 Forward -254 -235 -11.6036 0.264
slr0439 Reverse -57 -76 -11.6036 0.264
sll0071 Forward -341 -322 -9.83364 0.264
slr0060 Reverse -246 -265 -10.522 0.264
slr0468 Reverse -116 -135 -10.9153 0.264
sll0680 Reverse -296 -315 -14.4552 0.294
slr0646 Reverse -276 -295 -12.3902 0.281
sll0398 Forward -164 -145 -12.9802 0.281
sll0394 Reverse -89 -108 -7.57203 0.264
slr0415 Forward -46 -27 -7.57203 0.264
slr0418 Reverse -14 -33 -12.2919 0.281
sll0384 Reverse -290 -309 -10.4236 0.264
sll0382 Forward -88 -69 -4.03212 0.264
sll0380 Reverse -299 -318 -11.1119 0.264
sll0374 Reverse -16 -35 -14.2585 0.294
sll0182 Forward -388 -369 -5.70374 0.264
slr0912 Forward -156 -137 -13.6686 0.293
sll0891 Forward -165 -146 -12.1936 0.281
slr0923 Reverse -226 -245 -10.4236 0.264
sll0556 Forward -64 -45 -11.8003 0.27
sll0553 Reverse -190 -209 -5.50708 0.264
slr0565 Forward -200 -181 -5.50708 0.264
sll0543 Forward -75 -56 -14.1602 0.293
ssr1399 Forward -230 -211 -12.8819 0.281
slr0838 Reverse -381 -400 -14.4552 0.294
sll0083 Forward -315 -296 -11.4069 0.264
slr0079 Reverse -111 -130 -13.7669 0.293
slr0082 Reverse -291 -310 -10.6203 0.264
slr0090 Forward -340 -321 -14.1602 0.293
slr0095 Reverse -185 -204 -5.11376 0.264
slr0095 Reverse -31 -50 -10.7186 0.264
slr0498 Reverse -113 -132 -4.52377 0.264
slr0503 Forward -68 -49 -13.6686 0.293
slr0505 Forward -146 -127 -12.3902 0.281
slr0509 Forward -367 -348 -14.4552 0.294
slr0511 Reverse -120 -139 -13.3736 0.293
sll0474 Reverse -361 -380 -14.4552 0.294
sll0597 Forward -111 -92 -12.1936 0.281
sll0594 Reverse -212 -231 -13.9635 0.293
sll0099 Forward -379 -360 -12.7836 0.281
slr0121 Reverse -263 -282 -14.1602 0.293
slr0299 Forward -60 -41 -10.4236 0.264
sll0284 Reverse -22 -41 -10.9153 0.264
sll0790 Reverse -124 -143 -13.0786 0.281
sll0782 Forward -105 -86 -13.8652 0.293
sll0676 Reverse -132 -151 -11.5053 0.264
ssr1175 Forward -330 -311 -11.5053 0.264
sll0044 Reverse -209 -228 -13.2752 0.29
slr0042 Reverse -250 -269 -13.9635 0.293
sll0517 Reverse -351 -370 -14.0619 0.293
slr0525 Reverse -312 -331 -13.2752 0.29
slr0542 Reverse -311 -330 -11.8003 0.27
sll0900 Reverse -341 -360 -11.4069 0.264
slr0549 Forward -101 -82 -9.73531 0.264
slr0549 Forward -55 -36 -10.7186 0.264
slr0556 Reverse -347 -366 -14.3569 0.294
sll0524 Forward -286 -267 -12.9802 0.281
sll0522 Reverse -249 -268 -13.2752 0.29
sll1334 Reverse -269 -288 -4.13045 0.264
slr1429 Forward -43 -24 -4.13045 0.264
sll0623 Forward -398 -379 -9.14533 0.264
slr1573 Forward -163 -144 -14.0619 0.293
slr1577 Forward -125 -106 -11.0136 0.264
sll0726 Reverse -373 -392 -8.752 0.264
slr1665 Forward -234 -215 -9.53865 0.264
sll0444 Forward -239 -220 -13.4719 0.293
slr0452 Forward -271 -252 -6.58872 0.264
slr0457 Reverse -217 -236 7.47261 0.264
slr0585 Reverse -77 -96 -14.4552 0.294
slr0609 Reverse -365 -384 -13.8652 0.293
ssl5007 Reverse -111 -130 -13.8652 0.293
slr5037 Forward -137 -118 -4.03212 0.264
sll5047 Reverse -98 -117 3.83436 0.264
sll5060 Forward -245 -226 -13.6686 0.293
ssl7004 Forward -253 -234 -11.5053 0.264
slr7005 Reverse -114 -133 -11.5053 0.264
slr7010 Reverse -189 -208 -11.8003 0.27
slr7032 Reverse -123 -142 -12.9802 0.281
ssl7039 Reverse -163 -182 -3.54046 0.264
slr7041 Forward -197 -178 -3.54046 0.264
sll7090 Reverse -169 -188 -12.3902 0.281
slr7092 Forward -320 -301 -12.3902 0.281
sll8049 Forward -391 -372 -1.86883 0.264
sll8009 Forward -68 -49 -11.5053 0.264
ssl8039 Forward -129 -110 -12.1936 0.281
slr6031 Reverse -168 -187 -12.7836 0.281
ssr6032 Reverse -159 -178 -13.9635 0.293
slr6033 Reverse -178 -197 -13.9635 0.293
slr6041 Reverse -124 -143 -13.0786 0.281
slr6090 Reverse -168 -187 -12.7836 0.281
slr6091 Reverse -178 -197 -13.9635 0.293
ssl6092 Reverse -38 -57 -14.2585 0.294
6803t13 Reverse -53 -72 -13.5702 0.293
6803t24 Reverse -261 -280 -12.2919 0.281
6803t31 Reverse -103 -122 -14.1602 0.293
6803t32 Forward -161 -142 -10.522 0.264
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

1.000  0.000  0.000  0.000  
0.000 0.000 0.000 1.000
0.000 0.000 0.750 0.250
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.000 1.000 0.000 0.000
0.875 0.000 0.125 0.000
1.000 0.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.500 0.000 0.500
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.000 0.875 0.125
0.000 0.750 0.250 0.000
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000