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Details for NP_442864.1_7

Name NP_442864.1_7
Length 19
Regular expression C[CAG]G[CG][AT]G[GC]G[CG][CG]A[AC]C[GT]G[GT][AC][TG]G
Central No

Motif logo

Genes containing this motif

103 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1485 Reverse -148 -166 7.59063 0.274
slr1485 Reverse -142 -160 5.23069 0.293
slr1127 Reverse -311 -329 6.90232 0.274
slr0729 Forward -199 -181 8.47561 0.274
slr0739 Reverse -40 -58 5.82068 0.274
ssl0410 Forward -383 -365 5.52568 0.274
slr1413 Reverse -263 -281 8.18062 0.274
slr1414 Forward -363 -345 8.57394 0.274
slr1103 Forward -261 -243 5.52568 0.274
slr1105 Forward -72 -54 6.214 0.274
slr1776 Forward -373 -355 9.65558 0.274
slr1794 Forward -162 -144 6.11567 0.274
sll1655 Reverse -226 -244 7.09898 0.274
slr0969 Forward -219 -201 13.7855 0.211
slr0971 Reverse -265 -283 7.68896 0.274
slr0977 Forward -131 -113 7.59063 0.274
sll1024 Forward -370 -352 8.86894 0.274
sll0635 Reverse -282 -300 8.18062 0.274
slr1609 Forward -335 -317 7.09898 0.274
ssl1920 Reverse -197 -215 9.75391 0.274
slr2032 Forward -190 -172 5.52568 0.274
sll1834 Forward -247 -229 5.62401 0.274
slr1915 Reverse -253 -271 5.62401 0.274
sll0997 Reverse -314 -332 6.214 0.274
slr1380 Forward -311 -293 5.72234 0.274
sll1577 Reverse -189 -207 13.4905 0.213
sll1080 Reverse -344 -362 15.0638 0.211
ssl3441 Reverse -288 -306 6.01734 0.274
ssl3432 Reverse -139 -157 8.7706 0.274
sll1797 Reverse -159 -177 10.0489 0.274
sll1797 Reverse -329 -347 5.62401 0.274
slr1205 Forward -161 -143 6.50899 0.274
slr1207 Reverse -368 -386 10.3439 0.274
sll1112 Forward -86 -68 6.60732 0.274
sll1969 Reverse -292 -310 11.9172 0.242
sll1724 Forward -299 -281 7.59063 0.274
slr1236 Forward -264 -246 5.52568 0.274
sll1353 Reverse -238 -256 6.214 0.274
sll1348 Forward -229 -211 7.09898 0.274
sll0873 Forward -108 -90 6.50899 0.274
slr0881 Reverse -333 -351 6.50899 0.274
sll1765 Forward -210 -192 12.1139 0.242
slr2143 Forward -396 -378 8.47561 0.274
sll1692 Forward -238 -220 5.13236 0.294
slr1819 Reverse -257 -275 5.13236 0.294
slr1740 Forward -105 -87 5.13236 0.294
sll0847 Forward -169 -151 12.8022 0.221
slr0865 Forward -286 -268 5.91901 0.274
sll1909 Reverse -13 -31 6.41066 0.274
sll0245 Forward -315 -297 8.96727 0.274
slr2084 Forward -313 -295 11.8189 0.242
slr2103 Reverse -107 -125 8.47561 0.274
sll1218 Forward -263 -245 5.91901 0.274
slr0809 Reverse -309 -327 7.39397 0.274
sll1884 Forward -323 -305 6.90232 0.274
sll1173 Forward -263 -245 5.91901 0.274
ssr2130 Forward -226 -208 6.60732 0.274
sll1444 Forward -274 -256 6.90232 0.274
sll1098 Reverse -49 -67 13.7855 0.211
slr1676 Forward -376 -358 15.3588 0.211
slr0958 Forward -268 -250 15.1621 0.211
slr0959 Reverse -382 -400 5.03403 0.295
slr0150 Forward -309 -291 13.0972 0.213
slr1928 Forward -363 -345 15.0638 0.211
slr0009 Forward -88 -70 5.62401 0.274
sll0414 Reverse -12 -30 9.36059 0.274
slr0431 Forward -199 -181 9.36059 0.274
slr0056 Forward -282 -264 6.41066 0.274
sll0060 Forward -327 -309 7.00065 0.274
sll0051 Forward -331 -313 5.82068 0.274
slr0488 Forward -318 -300 14.7688 0.211
slr0640 Reverse -269 -287 9.75391 0.274
sll0394 Reverse -67 -85 14.1788 0.211
slr0415 Forward -68 -50 14.1788 0.211
slr0421 Reverse -342 -360 5.42735 0.281
slr0582 Reverse -123 -141 7.09898 0.274
sll0832 Reverse -382 -400 11.2289 0.262
slr0833 Forward -196 -178 11.2289 0.262
ssr1425 Reverse -106 -124 7.59063 0.274
sll0473 Forward -313 -295 6.214 0.274
slr0110 Forward -353 -335 5.91901 0.274
slr0111 Reverse -343 -361 6.31233 0.274
sll0286 Reverse -241 -259 7.29564 0.274
slr0530 Forward -238 -220 5.03403 0.295
sll0524 Forward -236 -218 8.57394 0.274
sll1344 Forward -195 -177 10.4422 0.274
sll1329 Reverse -147 -165 5.32902 0.287
slr0657 Reverse -141 -159 6.31233 0.274
slr1556 Reverse -257 -275 7.29564 0.274
sll1489 Forward -219 -201 13.9821 0.211
smr0004 Reverse -349 -367 5.52568 0.274
slr0587 Forward -292 -274 5.03403 0.295
slr0605 Reverse -307 -325 11.8189 0.242
slr5010 Reverse -296 -314 6.01734 0.274
sll5046 Reverse -353 -371 6.01734 0.274
slr5078 Forward -258 -240 13.2938 0.213
ssl5113 Reverse -152 -170 6.01734 0.274
slr5115 Forward -342 -324 6.01734 0.274
slr8023 Reverse -184 -202 6.50899 0.274
slr8038 Forward -165 -147 5.62401 0.274
slr6050 Forward -103 -85 7.88563 0.274
6803t06 Forward -329 -311 9.36059 0.274
6803t13 Reverse -320 -338 7.88563 0.274
6803t29 Reverse -268 -286 7.98396 0.274
6803t40 Reverse -268 -286 7.98396 0.274
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.250 0.500 0.250 0.000
0.000 0.125 0.875 0.000
0.125 0.625 0.250 0.000
0.500 0.000 0.000 0.500
0.000 0.000 1.000 0.000
0.000 0.375 0.625 0.000
0.000 0.000 1.000 0.000
0.000 0.750 0.250 0.000
0.125 0.500 0.250 0.125
0.875 0.000 0.125 0.000
0.750 0.250 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 0.625 0.375
0.000 0.000 1.000 0.000
0.000 0.125 0.625 0.250
0.750 0.250 0.000 0.000
0.000 0.000 0.375 0.625
0.000 0.000 0.875 0.125