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Details for NP_442861.1_1

Name NP_442861.1_1
Length 20
Regular expression TA[TC][CG][GA][GC]C[AG]A[AT][AGT][AT]T[TG][GT]G[CT][TC][GA][AC]
Central No

Motif logo

Genes containing this motif

148 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1397 Reverse -209 -228 10.5209 0.295
sll0704 Reverse -105 -124 14.1591 0.26
slr0732 Forward -71 -52 14.1591 0.26
sll0225 Forward -27 -8 9.63589 0.295
slr1772 Forward -334 -315 9.93088 0.295
sll1675 Reverse -58 -77 15.6341 0.227
sll1671 Reverse -21 -40 9.63589 0.295
slr1790 Forward -321 -302 9.63589 0.295
sll1669 Forward -337 -318 13.0775 0.26
sll1658 Forward -308 -289 10.2259 0.295
slr1800 Reverse -245 -264 15.5357 0.227
sll1654 Forward -47 -28 12.5858 0.26
sll0943 Reverse -61 -80 13.8641 0.26
slr0963 Forward -191 -172 13.8641 0.26
sll0939 Forward -183 -164 12.5858 0.26
slr0977 Reverse -300 -319 12.7825 0.26
slr0981 Reverse -117 -136 10.3242 0.295
sll1021 Forward -70 -51 13.2741 0.26
sll1512 Forward -149 -130 12.9791 0.26
slr1598 Reverse -106 -125 12.9791 0.26
sll1639 Forward -206 -187 15.1424 0.245
sll1751 Reverse -377 -396 9.63589 0.295
sll1834 Forward -354 -335 9.83255 0.295
slr1915 Reverse -146 -165 9.83255 0.295
slr1916 Reverse -130 -149 17.2074 0.197
ssl2559 Forward -156 -137 12.7825 0.26
ssl2559 Reverse -136 -155 9.93088 0.295
slr1704 Forward -130 -111 9.73422 0.295
slr2012 Forward -189 -170 12.4875 0.265
ssl3441 Forward -146 -127 9.43923 0.298
slr1900 Forward -278 -259 13.5691 0.26
slr1216 Forward -118 -99 12.6841 0.26
sll1742 Reverse -56 -75 16.9124 0.208
slr1538 Forward -148 -129 11.9958 0.277
slr1545 Forward -161 -142 14.1591 0.26
slr1224 Reverse -226 -245 12.0942 0.277
sll1138 Reverse -376 -395 17.994 0.19
slr1226 Reverse -352 -371 15.4374 0.227
ssr2049 Forward -326 -307 10.7175 0.295
ssr2067 Reverse -361 -380 12.2908 0.277
sll1275 Forward -162 -143 11.2092 0.295
slr1362 Reverse -26 -45 11.2092 0.295
slr1366 Reverse -338 -357 13.4708 0.26
sll0869 Forward -316 -297 19.764 0.19
slr1853 Forward -332 -313 11.6025 0.283
sll2011 Forward -41 -22 10.8159 0.295
sll2009 Forward -158 -139 13.9625 0.26
slr1818 Reverse -266 -285 13.6675 0.26
sll1628 Forward -326 -307 14.8474 0.26
sll1628 Forward -315 -296 10.8159 0.295
slr1262 Reverse -167 -186 10.1275 0.295
slr2060 Forward -204 -185 11.1109 0.295
slr2101 Forward -47 -28 10.0292 0.295
sll1973 Reverse -34 -53 12.8808 0.26
slr2105 Forward -139 -120 12.8808 0.26
slr2115 Forward -117 -98 13.0775 0.26
slr2128 Forward -205 -186 11.5042 0.29
sll0807 Reverse -333 -352 10.3242 0.295
sll0803 Reverse -150 -169 12.5858 0.26
slr1343 Forward -134 -115 10.7175 0.295
ssr3341 Forward -375 -356 9.93088 0.295
sll1880 Forward -138 -119 10.3242 0.295
sll1875 Reverse -159 -178 11.7008 0.283
sll1371 Reverse -53 -72 10.6192 0.295
sll1370 Forward -162 -143 9.83255 0.295
slr1271 Forward -292 -273 10.9142 0.295
slr1277 Forward -336 -317 13.4708 0.26
sll1167 Forward -162 -143 11.6025 0.283
ssr2130 Reverse -4 -23 11.6025 0.283
sll1166 Forward -330 -311 9.63589 0.295
sll1166 Reverse -273 -292 9.63589 0.295
slr0954 Reverse -203 -222 16.0274 0.218
sll1537 Reverse -221 -240 17.699 0.19
slr1627 Forward -257 -238 17.699 0.19
sll0265 Forward -323 -304 9.53756 0.297
sll0145 Forward -163 -144 10.9142 0.295
sll0141 Reverse -240 -259 9.63589 0.295
slr0161 Forward -154 -135 9.63589 0.295
ssl1807 Reverse -189 -208 10.1275 0.295
sll0944 Forward -199 -180 14.7491 0.26
sll0300 Forward -336 -317 16.3224 0.218
slr0327 Reverse -226 -245 16.3224 0.218
sll0166 Forward -57 -38 12.9791 0.26
sll0754 Reverse -228 -247 11.7992 0.278
sll0006 Forward -85 -66 10.7175 0.295
slr0214 Forward -336 -317 10.9142 0.295
slr0055 Forward -46 -27 9.43923 0.298
sll0063 Reverse -129 -148 11.1109 0.295
slr0482 Forward -228 -209 17.699 0.19
slr0484 Reverse -180 -199 9.93088 0.295
slr0492 Forward -152 -133 11.1109 0.295
slr0493 Forward -238 -219 18.1907 0.19
sll0188 Reverse -298 -317 15.4374 0.227
slr0896 Forward -92 -73 10.1275 0.295
slr0915 Reverse -76 -95 11.9958 0.277
sll0546 Reverse -378 -397 18.7807 0.19
slr0581 Forward -183 -164 9.43923 0.298
sll0829 Reverse -132 -151 10.7175 0.295
sll0086 Forward -198 -179 17.3057 0.197
slr0079 Reverse -153 -172 17.7974 0.19
slr0092 Reverse -354 -373 20.7473 0.19
sll0482 Forward -377 -358 14.6508 0.26
slr0519 Forward -153 -134 12.7825 0.26
slr0520 Reverse -57 -76 12.8808 0.26
sll0471 Forward -177 -158 10.0292 0.295
sll0597 Reverse -90 -109 11.8975 0.277
sll0597 Forward -143 -124 11.7992 0.278
slr0121 Forward -221 -202 10.9142 0.295
sll0781 Forward -119 -100 11.3075 0.295
slr0709 Forward -178 -159 10.4225 0.295
slr0710 Forward -242 -223 13.8641 0.26
slr0039 Reverse -194 -213 10.8159 0.295
slr0543 Reverse -213 -232 10.7175 0.295
sll0494 Reverse -153 -172 10.0292 0.295
sll1340 Forward -46 -27 12.9791 0.26
slr1426 Reverse -15 -34 12.9791 0.26
ssr2439 Reverse -210 -229 11.4058 0.295
sll1365 Reverse -142 -161 10.4225 0.295
slr1462 Forward -87 -68 10.4225 0.295
slr0654 Forward -156 -137 16.6174 0.218
sll0626 Forward -164 -145 9.53756 0.297
sll1484 Forward -20 -1 10.6192 0.295
sll0733 Forward -120 -101 10.4225 0.295
slr0751 Reverse -5 -24 10.4225 0.295
slr1177 Reverse -143 -162 9.53756 0.297
sll0572 Forward -345 -326 10.7175 0.295
slr0601 Forward -326 -307 10.3242 0.295
slr0601 Reverse -184 -203 10.3242 0.295
ssl5007 Forward -283 -264 11.8975 0.277
ssr5009 Reverse -232 -251 11.8975 0.277
sll5030 Forward -62 -43 11.2092 0.295
sll5036 Forward -147 -128 10.6192 0.295
sll5048 Reverse -162 -181 9.83255 0.295
sll5084 Forward -264 -245 9.53756 0.297
sll5086 Reverse -268 -287 9.83255 0.295
slr5087 Forward -351 -332 9.83255 0.295
ssl5100 Forward -76 -57 9.63589 0.295
slr5101 Reverse -145 -164 9.63589 0.295
slr7081 Reverse -340 -359 12.9791 0.26
sll7085 Forward -170 -151 9.73422 0.295
slr7101 Forward -355 -336 13.4708 0.26
slr6008 Forward -296 -277 9.43923 0.298
slr6016 Reverse -309 -328 9.63589 0.295
sll6053 Forward -356 -337 9.73422 0.295
sll6060 Reverse -273 -292 11.8975 0.277
ssl6061 Reverse -33 -52 11.8975 0.277
ssr6062 Forward -283 -264 11.8975 0.277
slr6067 Forward -296 -277 9.43923 0.298
slr6075 Reverse -309 -328 9.63589 0.295
slr6096 Forward -214 -195 11.1109 0.295
6803t01 Reverse -360 -379 11.2092 0.295
6803t34 Reverse -21 -40 11.9958 0.277
6803t39 Forward -267 -248 16.1257 0.218
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.100  0.000  0.000  0.900  
0.900 0.000 0.000 0.100
0.000 0.300 0.000 0.700
0.100 0.400 0.400 0.100
0.300 0.000 0.700 0.000
0.000 0.300 0.600 0.100
0.000 0.900 0.100 0.000
0.800 0.000 0.200 0.000
0.900 0.100 0.000 0.000
0.700 0.000 0.100 0.200
0.300 0.100 0.300 0.300
0.400 0.100 0.100 0.400
0.000 0.100 0.000 0.900
0.000 0.000 0.400 0.600
0.000 0.000 0.800 0.200
0.000 0.000 1.000 0.000
0.000 0.600 0.000 0.400
0.100 0.300 0.100 0.500
0.300 0.000 0.700 0.000
0.800 0.200 0.000 0.000