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Details for NP_442854.1_6

Name NP_442854.1_6
Length 20
Regular expression GGC[AC]AG[CG]G[GC][GC][TA]GG[CG][GTC][CT]TGC[CG]
Central Yes

Motif logo

Genes containing this motif

339 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Forward -186 -167 2.0644 0.279
slr1319 Reverse -321 -340 1.37609 0.279
slr1115 Forward -365 -346 5.30933 0.249
sll1063 Reverse -226 -245 2.3594 0.272
slr1128 Forward -381 -362 8.16093 0.229
sll0704 Forward -367 -348 1.96607 0.279
slr1006 Reverse -373 -392 7.86593 0.229
sll0699 Reverse -355 -374 2.65439 0.272
slr0243 Reverse -172 -191 9.53756 0.214
slr0250 Reverse -76 -95 0.982764 0.287
slr0252 Reverse -126 -145 1.96607 0.279
sll1324 Reverse -281 -300 1.37609 0.279
sll1321 Forward -167 -148 0.884433 0.287
slr1413 Reverse -32 -51 0.884433 0.287
slr1107 Forward -158 -139 3.73603 0.253
sll1033 Forward -78 -59 3.93269 0.253
sll1686 Forward -376 -357 4.81767 0.249
ssr2972 Reverse -189 -208 4.81767 0.249
sll1683 Forward -269 -250 1.67108 0.279
sll1682 Reverse -10 -29 3.83436 0.253
slr1779 Forward -152 -133 3.83436 0.253
slr1795 Forward -284 -265 4.71934 0.249
sll1198 Forward -62 -43 3.83436 0.253
slr1298 Reverse -350 -369 1.67108 0.279
sll1192 Forward -252 -233 7.57094 0.229
ssr1604 Reverse -62 -81 2.65439 0.272
slr0969 Forward -253 -234 4.32602 0.252
sll0934 Reverse -278 -297 6.88262 0.229
sll0928 Forward -204 -185 4.71934 0.249
slr0984 Forward -35 -16 3.14605 0.272
slr1079 Forward -276 -257 3.73603 0.253
sll1024 Forward -364 -345 2.26107 0.275
sll1020 Reverse -181 -200 0.491109 0.296
sll1018 Reverse -132 -151 5.11266 0.249
slr0689 Forward -175 -156 1.27776 0.283
slr0692 Reverse -223 -242 5.89931 0.238
slr1591 Forward -316 -297 1.27776 0.283
smr0005 Forward -175 -156 8.75091 0.22
ssl2923 Forward -267 -248 4.22769 0.252
ssl2922 Forward -39 -20 4.22769 0.252
sll1501 Forward -114 -95 0.491109 0.296
slr1609 Forward -329 -310 11.5042 0.178
slr1609 Reverse -310 -329 3.04771 0.272
sll1006 Reverse -215 -234 6.88262 0.229
slr1755 Reverse -278 -297 1.37609 0.279
sll1643 Forward -322 -303 10.5209 0.203
sll1640 Forward -121 -102 0.786102 0.288
sll1750 Forward -92 -73 5.99764 0.238
sll1750 Reverse -217 -236 1.86774 0.279
sll1749a Reverse -219 -238 8.06259 0.229
slr1851 Forward -375 -356 8.06259 0.229
sll1938 Reverse -380 -399 1.37609 0.279
sll1937 Forward -385 -366 7.37428 0.229
slr2043 Forward -208 -189 1.37609 0.279
slr2045 Forward -342 -323 2.55606 0.272
slr2045 Reverse -323 -342 1.57275 0.279
slr2053 Forward -159 -140 2.45773 0.272
slr1909 Forward -176 -157 2.75272 0.272
sll0997 Forward -284 -265 1.47442 0.279
sll0994 Reverse -365 -384 1.37609 0.279
sll0983 Reverse -360 -379 0.58944 0.292
slr1384 Forward -126 -107 0.58944 0.292
slr1385 Reverse -168 -187 0.58944 0.292
sll1290 Forward -331 -312 5.60432 0.249
slr1390 Forward -374 -355 3.93269 0.253
sll1285 Reverse -175 -194 14.9458 0.143
sll1283 Forward -204 -185 6.68596 0.234
slr1706 Reverse -123 -142 3.04771 0.272
slr1708 Forward -159 -140 5.211 0.249
sll1927 Forward -379 -360 0.786102 0.288
slr2005 Reverse -228 -247 0.786102 0.288
slr2016 Forward -400 -381 11.6025 0.178
slr2016 Forward -394 -375 10.1275 0.213
sll1913 Forward -136 -117 2.85105 0.272
slr1147 Reverse -256 -275 0.982764 0.287
ssl2084 Reverse -261 -280 4.42435 0.252
sll1822 Reverse -374 -393 2.3594 0.272
sll1819 Reverse -311 -330 1.47442 0.279
ssl3437 Reverse -289 -308 2.3594 0.272
ssl3436 Reverse -60 -79 2.3594 0.272
sll1801 Reverse -206 -225 7.07928 0.229
sll1123 Reverse -341 -360 4.81767 0.249
slr1196 Reverse -79 -98 0.884433 0.287
slr1201 Forward -191 -172 7.57094 0.229
sll1971 Reverse -369 -388 6.19431 0.238
sll1971 Forward -320 -301 4.03102 0.252
sll1734 Forward -87 -68 13.2741 0.164
sll1726 Reverse -297 -316 3.14605 0.272
sll1725 Reverse -180 -199 2.75272 0.272
sll1725 Reverse -186 -205 0.687771 0.29
sll1724 Forward -293 -274 13.8641 0.147
slr1844 Reverse -370 -389 1.47442 0.279
sll1712 Reverse -213 -232 7.17762 0.229
slr1537 Forward -381 -362 3.53937 0.256
slr1540 Reverse -123 -142 1.67108 0.279
ssl2823 Reverse -210 -229 6.4893 0.234
sll1463 Reverse -36 -55 6.78429 0.233
sll1461 Forward -202 -183 1.57275 0.279
slr1219 Reverse -173 -192 4.42435 0.252
slr1224 Forward -254 -235 1.57275 0.279
sll1135 Forward -389 -370 4.03102 0.252
slr1238 Forward -110 -91 5.50599 0.249
sll1127 Reverse -146 -165 1.96607 0.279
sll1127 Forward -155 -136 0.786102 0.288
slr1239 Forward -55 -36 1.96607 0.279
slr1239 Reverse -46 -65 0.786102 0.288
slr1442 Reverse -205 -224 1.67108 0.279
sll1282 Reverse -91 -110 2.0644 0.279
sll1281 Reverse -17 -36 6.98095 0.229
sll1277 Reverse -321 -340 3.73603 0.253
slr0876 Forward -239 -220 12.1925 0.178
ssr1480 Forward -215 -196 1.86774 0.279
ssl1633 Forward -338 -319 0.884433 0.287
slr0883 Forward -363 -344 1.0811 0.287
sll0869 Forward -231 -212 2.75272 0.272
sll0867 Forward -198 -179 0.884433 0.287
slr0886 Forward -300 -281 9.93088 0.213
slr1870 Reverse -303 -322 1.47442 0.279
sll1757 Forward -247 -228 10.2259 0.213
sll2013 Reverse -274 -293 0.687771 0.29
sll2007 Reverse -70 -89 2.0644 0.279
sll2002 Reverse -105 -124 2.94938 0.272
slr2144 Forward -55 -36 2.94938 0.272
sll1709 Reverse -375 -394 1.86774 0.279
sll1708 Forward -368 -349 18.879 0.062
sll1704 Forward -109 -90 1.57275 0.279
sll1694 Forward -303 -284 7.47261 0.229
sll1626 Forward -146 -127 8.84924 0.219
slr1740 Forward -149 -130 4.03102 0.252
slr1746 Reverse -177 -196 4.81767 0.249
sll0858 Forward -274 -255 3.53937 0.256
sll0857 Forward -82 -63 2.65439 0.272
sll0855 Forward -63 -44 2.85105 0.272
sll0847 Forward -163 -144 2.0644 0.279
sll0843 Forward -314 -295 2.26107 0.275
slr0864 Forward -211 -192 3.6377 0.253
slr0868 Reverse -88 -107 0.884433 0.287
sll1151 Forward -316 -297 0.982764 0.287
slr1253 Reverse -268 -287 1.37609 0.279
slr1259 Reverse -296 -315 4.12936 0.252
sll1961 Forward -120 -101 2.94938 0.272
sll1960 Reverse -107 -126 1.47442 0.279
slr1991 Forward -394 -375 6.09597 0.238
slr2003 Reverse -323 -342 14.7491 0.143
slr1720 Forward -322 -303 1.0811 0.287
slr1724 Reverse -210 -229 5.11266 0.249
ssr2912 Reverse -308 -327 1.57275 0.279
slr0261 Reverse -302 -321 4.916 0.249
ssl0461 Reverse -198 -217 11.6025 0.178
sll0248 Reverse -128 -147 5.80098 0.238
sll0242 Forward -212 -193 1.0811 0.287
sll0241 Reverse -237 -256 5.80098 0.238
slr2079 Reverse -271 -290 0.982764 0.287
slr2084 Forward -180 -161 9.43923 0.214
slr2088 Reverse -54 -73 3.04771 0.272
sll1973 Reverse -226 -245 0.982764 0.287
slr2105 Forward -352 -333 9.63589 0.214
sll1426 Reverse -180 -199 8.94757 0.218
slr1511 Reverse -290 -309 1.27776 0.283
slr1512 Reverse -266 -285 6.58763 0.234
slr1515 Reverse -255 -274 3.44104 0.259
slr1517 Reverse -123 -142 2.45773 0.272
slr0813 Reverse -347 -366 5.40766 0.249
ssr1391 Forward -45 -26 15.8307 0.143
slr0823 Reverse -346 -365 6.4893 0.234
sll1261 Reverse -100 -119 2.55606 0.272
sll1260 Forward -288 -269 4.22769 0.252
slr1336 Reverse -195 -214 4.22769 0.252
slr1344 Forward -294 -275 6.09597 0.238
slr1349 Reverse -120 -139 1.67108 0.279
sll1245 Forward -354 -335 2.3594 0.272
slr1959 Forward -366 -347 3.53937 0.256
ssl3573 Forward -253 -234 13.7658 0.147
slr1969 Reverse -308 -327 6.88262 0.229
sll1884 Reverse -306 -325 3.04771 0.272
sll1878 Forward -226 -207 1.76941 0.279
slr1983 Forward -332 -313 1.96607 0.279
slr1467 Forward -179 -160 2.3594 0.272
slr1468 Reverse -219 -238 3.6377 0.253
slr1269 Forward -295 -276 2.26107 0.275
slr1270 Forward -131 -112 7.17762 0.229
slr1272 Reverse -91 -110 1.57275 0.279
ssr2130 Forward -291 -272 0.687771 0.29
slr1530 Forward -144 -125 4.71934 0.249
slr1531 Forward -72 -53 4.42435 0.252
slr1531 Reverse -53 -72 3.14605 0.272
ssl2162 Reverse -327 -346 4.81767 0.249
ssl2162 Reverse -321 -340 0.687771 0.29
slr1672 Forward -100 -81 12.9791 0.171
slr1678 Reverse -335 -354 0.491109 0.296
slr1686 Forward -378 -359 1.47442 0.279
sll0921 Forward -76 -57 5.89931 0.238
slr1004 Forward -282 -263 4.71934 0.249
slr0935 Reverse -2 -21 4.71934 0.249
slr0954 Reverse -91 -110 0.982764 0.287
slr0959 Forward -360 -341 1.57275 0.279
slr1622 Reverse -55 -74 6.09597 0.238
slr1626 Forward -103 -84 1.27776 0.283
sll1528 Reverse -375 -394 2.55606 0.272
slr1643 Forward -91 -72 2.65439 0.272
slr1645 Reverse -267 -286 5.40766 0.249
sll0427 Forward -203 -184 4.71934 0.249
slr0443 Reverse -24 -43 4.71934 0.249
sll0426 Reverse -248 -267 4.916 0.249
sll0418 Forward -113 -94 1.17943 0.285
slr0447 Reverse -324 -343 8.65258 0.222
sll0271 Forward -48 -29 1.37609 0.279
slr0280 Reverse -109 -128 5.30933 0.249
sll0264 Reverse -56 -75 7.47261 0.229
slr0150 Forward -225 -206 0.58944 0.292
sll1854 Forward -331 -312 1.67108 0.279
slr1950 Forward -266 -247 9.53756 0.214
sll0176 Reverse -207 -226 3.83436 0.253
sll0168 Forward -328 -309 0.687771 0.29
ssl0294 Reverse -131 -150 2.85105 0.272
sll0157 Reverse -97 -116 7.27595 0.229
sml0001 Forward -201 -182 2.3594 0.272
slr0369 Forward -92 -73 0.884433 0.287
slr0376 Forward -191 -172 14.6508 0.143
slr0384 Reverse -258 -277 0.58944 0.292
ssl1426 Forward -159 -140 4.42435 0.252
sll0765 Reverse -339 -358 4.12936 0.252
sll0764 Forward -289 -270 1.17943 0.285
sll0757 Forward -315 -296 2.65439 0.272
slr0780 Reverse -205 -224 2.65439 0.272
sll0749 Forward -251 -232 3.04771 0.272
slr0354 Forward -281 -262 12.3892 0.175
sll0023 Forward -97 -78 9.0459 0.218
sll0006 Forward -188 -169 3.44104 0.259
sll0208 Forward -341 -322 3.04771 0.272
sll0207 Forward -321 -302 1.17943 0.285
slr0220 Forward -285 -266 14.1591 0.147
sll0410 Forward -144 -125 2.3594 0.272
sll0409 Forward -341 -322 2.0644 0.279
sll0408 Forward -235 -216 2.3594 0.272
ssr0102 Forward -83 -64 2.3594 0.272
slr0050 Forward -373 -354 2.3594 0.272
slr0056 Forward -323 -304 4.42435 0.252
sll0057 Forward -260 -241 0.58944 0.292
slr0477 Forward -349 -330 2.75272 0.272
slr0479 Reverse -15 -34 2.75272 0.272
slr0483 Forward -275 -256 5.01433 0.249
slr0492 Forward -245 -226 0.786102 0.288
sll0455 Reverse -39 -58 2.65439 0.272
slr0495 Forward -89 -70 2.65439 0.272
sll0686 Forward -58 -39 3.73603 0.253
sll0681 Reverse -46 -65 0.982764 0.287
slr0634 Reverse -56 -75 0.786102 0.288
slr0643 Forward -269 -250 22.7139 0.0459
slr0643 Reverse -260 -279 5.01433 0.249
slr0416 Forward -71 -52 0.982764 0.287
slr0418 Forward -314 -295 5.99764 0.238
sll0383 Reverse -273 -292 3.04771 0.272
sll0379 Reverse -218 -237 9.0459 0.218
sll0370 Reverse -61 -80 10.7175 0.203
sll0189 Reverse -74 -93 1.47442 0.279
slr0192 Forward -183 -164 5.80098 0.238
sll0184 Reverse -174 -193 4.03102 0.252
slr0201 Forward -133 -114 4.03102 0.252
ssl0350 Forward -353 -334 11.7992 0.178
sll0178 Reverse -341 -360 1.37609 0.279
ssl1045 Reverse -91 -110 7.47261 0.229
slr0574 Forward -318 -299 7.47261 0.229
ssr1398 Forward -130 -111 5.50599 0.249
slr0836 Reverse -172 -191 3.73603 0.253
sll0825 Forward -320 -301 2.55606 0.272
slr0844 Reverse -144 -163 2.55606 0.272
slr0072 Reverse -217 -236 5.99764 0.238
sll0482 Forward -335 -316 6.58763 0.234
slr0509 Forward -335 -316 7.07928 0.229
sll0479 Forward -159 -140 4.62101 0.252
sll0479 Forward -44 -25 1.76941 0.279
slr0517 Reverse -129 -148 0.491109 0.296
sll0597 Reverse -185 -204 3.93269 0.253
slr0103 Forward -146 -127 4.916 0.249
slr0111 Forward -351 -332 3.73603 0.253
slr0121 Reverse -373 -392 1.17943 0.285
slr0299 Forward -121 -102 11.9958 0.178
ssl0511 Reverse -205 -224 2.94938 0.272
sll0777 Forward -201 -182 9.3409 0.215
smr0003 Reverse -220 -239 0.884433 0.287
sll0036 Reverse -168 -187 5.30933 0.249
sll0033 Reverse -242 -261 10.5209 0.203
sll0033 Reverse -296 -315 3.6377 0.253
slr0044 Reverse -202 -221 4.916 0.249
slr0530 Forward -103 -84 0.884433 0.287
sll0509 Reverse -35 -54 14.5524 0.143
sll0506 Reverse -37 -56 2.85105 0.272
sll0503 Reverse -91 -110 6.88262 0.229
slr0543 Forward -353 -334 7.07928 0.229
slr0543 Reverse -334 -353 4.12936 0.252
slr0926 Forward -303 -284 1.17943 0.285
sll0535 Forward -298 -279 0.58944 0.292
sll0534 Reverse -290 -309 19.6656 0.0613
sll0528 Forward -219 -200 8.94757 0.218
sll0524 Forward -248 -229 2.85105 0.272
slr1418 Reverse -297 -316 1.47442 0.279
slr1420 Reverse -20 -39 12.5858 0.175
slr1455 Reverse -304 -323 1.76941 0.279
slr1461 Reverse -207 -226 6.39097 0.238
ssl2667 Forward -259 -240 0.884433 0.287
slr0651 Forward -231 -212 3.34271 0.265
sll0630 Forward -230 -211 7.17762 0.229
slr1556 Forward -236 -217 1.76941 0.279
slr1556 Reverse -263 -282 0.884433 0.287
slr1562 Reverse -227 -246 8.35759 0.229
slr1564 Forward -194 -175 5.211 0.249
sll1485 Reverse -11 -30 6.4893 0.234
sll0729 Reverse -158 -177 2.94938 0.272
slr1656 Forward -185 -166 2.16274 0.279
ssr2781 Reverse -234 -253 4.03102 0.252
sll0450 Forward -264 -245 4.52268 0.252
slr0449 Reverse -163 -182 4.52268 0.252
sll0436 Reverse -116 -135 1.37609 0.279
slr0454 Forward -32 -13 1.37609 0.279
slr0455 Reverse -169 -188 20.354 0.0613
slr0456 Reverse -254 -273 11.2092 0.189
slr0457 Reverse -58 -77 11.0125 0.193
slr0458 Forward -254 -235 1.57275 0.279
slr1179 Forward -366 -347 3.44104 0.259
slr1179 Forward -229 -210 2.45773 0.272
slr1182 Forward -77 -58 1.86774 0.279
slr0590 Forward -180 -161 5.80098 0.238
slr0593 Reverse -5 -24 0.687771 0.29
slr0605 Forward -256 -237 1.57275 0.279
ssl5007 Forward -353 -334 1.67108 0.279
ssl5008 Forward -22 -3 1.67108 0.279
ssr5009 Reverse -162 -181 1.67108 0.279
slr5051 Forward -355 -336 12.3892 0.175
slr5073 Reverse -238 -257 1.76941 0.279
slr5085 Forward -224 -205 3.6377 0.253
slr5111 Reverse -292 -311 1.76941 0.279
ssl5114 Reverse -87 -106 6.29264 0.238
slr5115 Forward -79 -60 6.29264 0.238
slr5116 Reverse -58 -77 4.52268 0.252
slr7012 Reverse -299 -318 2.0644 0.279
slr7032 Forward -105 -86 2.0644 0.279
sll8004 Reverse -148 -167 1.57275 0.279
slr8021 Forward -294 -275 0.884433 0.287
sll8031 Forward -151 -132 4.62101 0.252
sll8033 Forward -336 -317 2.3594 0.272
slr8037 Forward -31 -12 7.66927 0.229
slr8037 Reverse -356 -375 4.22769 0.252
slr6007 Reverse -339 -358 4.22769 0.252
sll6010 Forward -224 -205 3.6377 0.253
ssr6027 Reverse -209 -228 9.83255 0.213
slr6050 Reverse -127 -146 1.17943 0.285
slr6066 Reverse -339 -358 4.22769 0.252
sll6069 Forward -224 -205 3.6377 0.253
ssr6086 Reverse -209 -228 9.83255 0.213
slr6107 Forward -220 -201 2.26107 0.275
6803t15 Reverse -35 -54 1.86774 0.279
6803t16 Forward -213 -194 8.35759 0.229
6803t17 Forward -302 -283 5.50599 0.249
6803t18 Reverse -171 -190 3.24438 0.272
6803t35 Forward -295 -276 7.66927 0.229
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.182  0.818  0.000  
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.545 0.273 0.182 0.000
1.000 0.000 0.000 0.000
0.182 0.000 0.636 0.182
0.000 0.727 0.273 0.000
0.000 0.000 0.818 0.182
0.000 0.364 0.636 0.000
0.000 0.273 0.636 0.091
0.273 0.000 0.000 0.727
0.000 0.182 0.727 0.091
0.091 0.182 0.727 0.000
0.000 0.545 0.364 0.091
0.000 0.273 0.364 0.364
0.000 0.636 0.000 0.364
0.000 0.000 0.000 1.000
0.000 0.000 0.818 0.182
0.000 1.000 0.000 0.000
0.000 0.545 0.455 0.000