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Details for NP_442776.1_1

Name NP_442776.1_1
Length 20
Regular expression GCCA[CA][GT]GC[CT]CA[GA]GC[AGC][AG]T[CT]GA
Central Yes

Motif logo

Genes containing this motif

376 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Forward -74 -55 4.12936 0.278
slr1316 Reverse -290 -309 9.63589 0.181
slr1317 Reverse -137 -156 8.45592 0.197
slr1319 Reverse -322 -341 6.88262 0.214
slr1319 Forward -329 -310 4.81767 0.268
sll1405 Forward -178 -159 3.83436 0.279
slr1489 Reverse -276 -295 2.94938 0.294
slr1492 Reverse -324 -343 3.24438 0.29
slr1120 Reverse -345 -364 6.4893 0.226
sll1054 Forward -244 -225 3.93269 0.279
sll1049 Reverse -318 -337 13.3725 0.127
slr1127 Reverse -318 -337 8.94757 0.181
slr1129 Reverse -18 -37 5.60432 0.241
sll1045 Reverse -142 -161 6.68596 0.223
slr0721 Forward -376 -357 5.80098 0.24
slr0730 Forward -22 -3 4.03102 0.278
sll0704 Forward -163 -144 6.98095 0.214
slr0732 Reverse -13 -32 6.98095 0.214
sll0703 Forward -361 -342 15.1424 0.0843
slr0741 Reverse -104 -123 4.32602 0.278
slr0241 Forward -332 -313 6.4893 0.226
sll0227 Forward -394 -375 13.8641 0.122
slr0251 Forward -161 -142 3.24438 0.29
sll0218 Forward -356 -337 15.5357 0.0822
sll0218 Reverse -366 -385 8.25926 0.2
sll1324 Forward -301 -282 20.8456 0.039
sll1323 Forward -272 -253 3.6377 0.279
slr1417 Reverse -240 -259 3.04771 0.294
sll1319 Forward -178 -159 3.24438 0.29
slr1097 Forward -117 -98 8.16093 0.201
slr1099 Reverse -293 -312 8.35759 0.197
slr1099 Forward -220 -201 5.50599 0.241
slr1104 Reverse -332 -351 12.6841 0.127
sll1037 Forward -205 -186 9.93088 0.181
sll1032 Reverse -326 -345 22.4189 0.0328
sll1031 Reverse -143 -162 6.88262 0.214
slr1110 Forward -313 -294 12.4875 0.127
slr1110 Reverse -272 -291 9.63589 0.181
slr1777 Reverse -259 -278 10.2259 0.175
slr1778 Forward -323 -304 18.584 0.0502
sll1670 Forward -146 -127 4.916 0.268
sll1669 Reverse -249 -268 9.0459 0.181
ssr2998 Reverse -300 -319 9.0459 0.181
sll1664 Reverse -304 -323 11.4058 0.157
sll1201 Forward -58 -39 2.94938 0.294
slr1291 Reverse -168 -187 2.94938 0.294
ssr2142 Forward -257 -238 4.03102 0.278
sll1196 Forward -372 -353 5.60432 0.241
slr1301 Forward -23 -4 12.8808 0.127
sll1184 Reverse -211 -230 4.03102 0.278
slr0966 Reverse -118 -137 2.94938 0.294
sll0936 Reverse -153 -172 22.5172 0.0328
sll0926 Forward -119 -100 3.83436 0.279
slr1613 Forward -83 -64 3.93269 0.279
ssr1766 Forward -230 -211 6.39097 0.228
slr1087 Forward -214 -195 11.5042 0.157
ssr1789 Reverse -288 -307 3.93269 0.279
sll0640 Reverse -187 -206 3.73603 0.279
sll0638 Forward -23 -4 5.50599 0.241
slr0692 Reverse -155 -174 5.50599 0.241
slr1590 Forward -244 -225 5.80098 0.24
slr1598 Reverse -279 -298 4.62101 0.274
sll1509 Forward -32 -13 10.2259 0.175
slr1599 Reverse -334 -353 10.2259 0.175
sll1501 Forward -119 -100 4.916 0.268
slr1044 Reverse -267 -286 3.14605 0.293
slr1051 Reverse -167 -186 4.32602 0.278
slr1761 Forward -38 -19 3.24438 0.29
sll1945 Reverse -318 -337 12.6841 0.127
slr2034 Forward -321 -302 12.6841 0.127
sll1941 Reverse -97 -116 5.50599 0.241
slr2042 Forward -363 -344 5.50599 0.241
sll1940 Forward -65 -46 3.34271 0.289
sll1939 Forward -125 -106 5.211 0.256
slr2044 Forward -22 -3 3.24438 0.29
sll1934 Forward -332 -313 3.34271 0.289
slr1909 Reverse -156 -175 5.01433 0.266
slr1912 Reverse -334 -353 10.8159 0.164
sll1830 Reverse -201 -220 14.1591 0.118
sll0996 Forward -305 -286 6.98095 0.214
sll0993 Reverse -151 -170 8.06259 0.202
sll0992 Reverse -346 -365 4.52268 0.274
slr1028 Forward -95 -76 3.6377 0.279
sll1290 Forward -342 -323 10.6192 0.167
sll1285 Forward -195 -176 16.6174 0.0672
sll1283 Reverse -325 -344 12.7825 0.127
sll1583 Reverse -162 -181 2.85105 0.298
slr1703 Forward -192 -173 7.37428 0.208
sll1927 Reverse -211 -230 5.60432 0.241
sll1926 Reverse -176 -195 13.3725 0.127
slr2005 Forward -396 -377 5.60432 0.241
slr2012 Forward -257 -238 6.09597 0.234
sll1920 Forward -152 -133 9.93088 0.181
slr2023 Reverse -37 -56 9.93088 0.181
slr2024 Reverse -276 -295 6.98095 0.214
sll1917 Forward -119 -100 6.68596 0.223
sll1072 Reverse -140 -159 9.24257 0.181
ssl3446 Forward -94 -75 21.3373 0.039
ssl3445 Reverse -233 -252 6.58763 0.225
sll1820 Reverse -335 -354 5.70265 0.241
sll1818 Reverse -359 -378 7.96426 0.203
sll1811 Forward -258 -239 10.3242 0.175
sll1811 Forward -198 -179 7.47261 0.206
sll1805 Forward -328 -309 11.0125 0.159
sll1804 Forward -374 -355 18.7807 0.0502
sll1802 Forward -395 -376 6.09597 0.234
sll1801 Forward -40 -21 6.09597 0.234
sll1124 Forward -259 -240 4.52268 0.274
sll1120 Reverse -46 -65 5.30933 0.252
sll1119 Forward -358 -339 3.44104 0.288
slr1200 Reverse -310 -329 4.22769 0.278
slr1206 Reverse -40 -59 5.211 0.256
ssl3712 Reverse -244 -263 6.39097 0.228
sll1747 Forward -305 -286 18.1907 0.0502
sll1745 Forward -27 -8 5.80098 0.24
sll1744 Forward -27 -8 9.43923 0.181
sll1737 Reverse -81 -100 4.81767 0.268
slr1828 Forward -169 -150 4.81767 0.268
slr1830 Forward -339 -320 6.29264 0.231
sll1733 Forward -116 -97 4.916 0.268
sll1725 Forward -194 -175 17.6007 0.0594
sll1721 Reverse -375 -394 6.19431 0.233
slr1839 Forward -21 -2 9.53756 0.181
sll1713 Forward -337 -318 3.14605 0.293
slr1535 Forward -232 -213 17.3057 0.0601
slr1544 Forward -40 -21 5.211 0.256
sll1463 Forward -128 -109 11.9958 0.138
slr1549 Reverse -259 -278 15.4374 0.0822
slr1549 Forward -180 -161 2.94938 0.294
slr1219 Forward -193 -174 7.47261 0.206
slr1225 Forward -117 -98 4.42435 0.278
slr1238 Forward -24 -5 5.01433 0.266
slr1444 Forward -304 -285 4.52268 0.274
slr1357 Forward -358 -339 7.17762 0.209
sll1275 Reverse -335 -354 7.47261 0.206
slr0883 Reverse -169 -188 2.85105 0.298
sll0869 Reverse -211 -230 5.30933 0.252
sll0867 Forward -197 -178 15.1424 0.0843
sll1316 Reverse -301 -320 9.0459 0.181
smr0009 Forward -268 -249 9.0459 0.181
sll1774 Reverse -234 -253 3.14605 0.293
sll1768 Forward -216 -197 6.19431 0.233
ssl3379 Forward -170 -151 5.30933 0.252
sll1760 Forward -367 -348 4.12936 0.278
slr1882 Forward -343 -324 9.3409 0.181
slr1887 Forward -210 -191 4.03102 0.278
sll2013 Reverse -346 -365 2.94938 0.294
sml0007 Reverse -103 -122 4.81767 0.268
sll2002 Reverse -247 -266 4.03102 0.278
sll1709 Forward -29 -10 3.83436 0.279
sll1708 Forward -271 -252 10.7175 0.164
sll1698 Reverse -44 -63 8.35759 0.197
slr1734 Forward -229 -210 9.83255 0.181
sll0848 Reverse -98 -117 11.1109 0.159
sll0847 Reverse -311 -330 8.55425 0.197
sll0839 Forward -95 -76 3.04771 0.294
sll1163 Forward -163 -144 3.83436 0.279
ssl2296 Forward -376 -357 6.39097 0.228
slr1255 Forward -111 -92 3.24438 0.29
slr1259 Forward -214 -195 5.89931 0.24
slr2060 Forward -69 -50 8.35759 0.197
ssr3383 Forward -326 -307 16.1257 0.0772
slr1715 Forward -375 -356 11.3075 0.159
slr1721 Reverse -356 -375 4.03102 0.278
sll0236 Reverse -161 -180 7.47261 0.206
slr2083 Reverse -172 -191 5.60432 0.241
slr2102 Forward -57 -38 2.85105 0.298
sll1973 Forward -246 -227 12.6841 0.127
slr1522 Forward -248 -229 7.57094 0.206
slr1522 Forward -287 -268 7.17762 0.209
ssl2749 Forward -286 -267 6.4893 0.226
ssr3571 Forward -123 -104 7.17762 0.209
slr2122 Forward -268 -249 2.94938 0.294
slr2125 Reverse -101 -120 2.94938 0.294
sll1994a Forward -189 -170 4.81767 0.268
sll1231 Reverse -172 -191 9.43923 0.181
slr1330 Forward -168 -149 4.62101 0.274
slr0806 Forward -329 -310 4.42435 0.278
slr0812 Reverse -179 -198 4.32602 0.278
ssl2471 Reverse -205 -224 4.32602 0.278
sll1898 Reverse -82 -101 3.34271 0.289
slr1959 Forward -168 -149 3.34271 0.289
ssl3573 Reverse -186 -205 4.03102 0.278
sll1884 Reverse -104 -123 4.62101 0.274
sll1883 Forward -191 -172 3.04771 0.294
sll1882 Forward -351 -332 7.86593 0.203
slr1983 Forward -361 -342 3.24438 0.29
sll1382 Forward -254 -235 9.43923 0.181
slr1474 Reverse -177 -196 9.43923 0.181
sll1172 Forward -231 -212 3.93269 0.279
slr1279 Reverse -52 -71 3.93269 0.279
sll1169 Reverse -288 -307 13.8641 0.122
sll1435 Reverse -354 -373 4.03102 0.278
sll1433 Forward -217 -198 3.93269 0.279
sll1101 Reverse -36 -55 8.35759 0.197
ssl2148 Forward -157 -138 7.86593 0.203
slr1164 Reverse -145 -164 7.86593 0.203
slr1673 Forward -139 -120 17.2074 0.0601
slr1674 Forward -213 -194 3.53937 0.284
slr1677 Reverse -224 -243 5.89931 0.24
ssr2806 Forward -80 -61 7.17762 0.209
sll1557 Forward -326 -307 5.01433 0.266
slr1692 Forward -235 -216 8.55425 0.197
slr1692 Forward -236 -217 3.04771 0.294
sll1541 Reverse -272 -291 6.4893 0.226
sll1540 Forward -293 -274 8.35759 0.197
sll1535 Reverse -340 -359 4.81767 0.268
sll1528 Forward -317 -298 3.73603 0.279
slr1645 Forward -287 -268 6.09597 0.234
ssr2754 Reverse -196 -215 3.04771 0.294
sll0426 Reverse -242 -261 13.0775 0.127
sll0273 Reverse -129 -148 9.0459 0.181
slr0280 Forward -129 -110 12.7825 0.127
sll0270 Reverse -271 -290 6.29264 0.231
sll0268 Forward -396 -377 2.94938 0.294
sll0263 Reverse -29 -48 3.6377 0.279
sll0260 Forward -56 -37 3.6377 0.279
ssr0482 Reverse -234 -253 3.6377 0.279
slr0293 Forward -338 -319 4.22769 0.278
slr0399 Reverse -110 -129 4.22769 0.278
slr0402 Reverse -253 -272 3.6377 0.279
slr0145 Forward -50 -31 7.57094 0.206
slr0162 Forward -337 -318 3.83436 0.279
slr0163 Forward -133 -114 7.66927 0.206
slr1949 Forward -329 -310 3.6377 0.279
slr0338 Reverse -316 -335 3.24438 0.29
sll0173 Forward -113 -94 3.6377 0.279
slr0184 Reverse -366 -385 3.83436 0.279
slr0186 Forward -385 -366 7.47261 0.206
slr0369 Forward -103 -84 8.35759 0.197
slr0373 Reverse -293 -312 12.2908 0.127
slr0381 Forward -302 -283 7.57094 0.206
slr0383 Reverse -31 -50 4.22769 0.278
sll0329 Forward -180 -161 2.94938 0.294
slr0388 Reverse -154 -173 9.0459 0.181
slr0769 Forward -313 -294 5.70265 0.241
sll0771 Forward -250 -231 11.0125 0.159
slr0774 Reverse -48 -67 11.0125 0.159
sll0766 Reverse -68 -87 5.50599 0.241
sll0764 Reverse -269 -288 6.29264 0.231
sll0763 Reverse -270 -289 3.73603 0.279
sll0760 Forward -391 -372 8.06259 0.202
sll0322 Forward -205 -186 4.32602 0.278
slr0354 Forward -270 -251 9.83255 0.181
sll0019 Forward -371 -352 3.93269 0.279
sll0007 Reverse -5 -24 8.06259 0.202
slr0224 Forward -354 -335 4.62101 0.274
ssl0788 Forward -188 -169 8.16093 0.201
ssl0788 Reverse -294 -313 5.99764 0.239
sll0413 Forward -244 -225 5.60432 0.241
ssl0769 Forward -142 -123 9.24257 0.181
ssl0769 Forward -202 -183 5.50599 0.241
sll0402 Reverse -274 -293 3.34271 0.289
slr0440 Reverse -315 -334 5.50599 0.241
sll0070 Reverse -292 -311 3.24438 0.29
slr0056 Reverse -271 -290 3.14605 0.293
sll0051 Reverse -355 -374 6.39097 0.228
slr0474 Reverse -201 -220 4.03102 0.278
sml0002 Reverse -246 -265 4.62101 0.274
slr0483 Forward -252 -233 7.37428 0.208
slr0496 Reverse -275 -294 6.58763 0.225
slr0496 Forward -400 -381 3.83436 0.279
sll0684 Forward -231 -212 8.94757 0.181
sll0679 Forward -397 -378 6.09597 0.234
slr0719 Forward -287 -268 4.12936 0.278
slr0628 Forward -375 -356 9.63589 0.181
slr0644 Reverse -287 -306 12.3892 0.127
ssl0738 Reverse -243 -262 3.93269 0.279
slr0211 Reverse -212 -231 7.96426 0.203
slr0575 Reverse -301 -320 3.44104 0.288
sll0541 Forward -388 -369 4.12936 0.278
sll0539 Forward -300 -281 4.81767 0.268
ssr1398 Forward -241 -222 5.80098 0.24
ssr1399 Reverse -80 -99 4.71934 0.273
sll0825 Reverse -235 -254 3.44104 0.288
slr0844 Forward -229 -210 3.44104 0.288
slr0072 Forward -340 -321 4.62101 0.274
slr0073 Reverse -294 -313 4.71934 0.273
sll0088 Reverse -57 -76 3.73603 0.279
slr0074 Forward -199 -180 3.73603 0.279
slr0081 Forward -290 -271 3.14605 0.293
slr0088 Forward -361 -342 7.17762 0.209
sll0488 Reverse -78 -97 4.52268 0.274
slr0509 Reverse -345 -364 18.1907 0.0502
sll0478 Forward -49 -30 4.81767 0.268
sll0469 Forward -265 -246 3.14605 0.293
sll0593 Reverse -294 -313 15.4374 0.0822
slr0104 Forward -65 -46 4.12936 0.278
sll0099 Forward -398 -379 10.7175 0.164
sll0289 Forward -271 -252 2.94938 0.294
sll0288 Reverse -65 -84 4.52268 0.274
slr0298 Forward -147 -128 4.52268 0.274
slr0299 Reverse -101 -120 5.89931 0.24
slr0304 Forward -199 -180 3.53937 0.284
sll0798 Forward -34 -15 4.32602 0.278
sll0789 Forward -204 -185 6.88262 0.214
sll0776 Reverse -322 -341 3.73603 0.279
ssr1169 Forward -356 -337 3.73603 0.279
slr0707 Reverse -87 -106 3.04771 0.294
slr0708 Forward -136 -117 6.88262 0.214
slr0710 Forward -260 -241 7.27595 0.209
sll0660 Reverse -216 -235 12.3892 0.127
slr0713 Forward -84 -65 12.3892 0.127
sll0657 Forward -265 -246 8.94757 0.181
sll0044 Reverse -217 -236 3.83436 0.279
slr0527 Reverse -222 -241 15.7324 0.0822
slr0529 Forward -58 -39 8.25926 0.2
slr0536 Reverse -134 -153 4.03102 0.278
sll0507 Reverse -2 -21 3.44104 0.288
sll0506 Reverse -75 -94 7.7676 0.203
sll0495 Reverse -195 -214 3.04771 0.294
sll0493 Forward -313 -294 13.2741 0.127
sll0493 Forward -187 -168 4.916 0.268
sll0535 Forward -241 -222 6.98095 0.214
slr0550 Forward -284 -265 3.73603 0.279
sll0528 Reverse -199 -218 8.55425 0.197
slr0556 Reverse -376 -395 7.57094 0.206
sll0522 Reverse -252 -271 9.0459 0.181
slr1421 Reverse -375 -394 2.94938 0.294
sll1344 Forward -252 -233 5.99764 0.239
slr1425 Reverse -376 -395 5.89931 0.24
sll1333 Reverse -239 -258 11.4058 0.157
sll1329 Reverse -268 -287 3.53937 0.284
slr1451 Reverse -115 -134 17.0107 0.0609
slr1453 Forward -91 -72 13.7658 0.122
slr1456 Reverse -140 -159 4.03102 0.278
slr0665 Forward -104 -85 6.58763 0.225
slr1560 Forward -385 -366 4.32602 0.278
slr1563 Forward -129 -110 11.2092 0.159
slr1563 Reverse -76 -95 4.32602 0.278
slr1573 Reverse -313 -332 4.42435 0.278
sll1485 Forward -330 -311 4.12936 0.278
sll1483 Forward -384 -365 9.83255 0.181
sll1482 Reverse -249 -268 6.68596 0.223
sll0732 Forward -124 -105 8.16093 0.201
sll0727 Forward -173 -154 6.88262 0.214
ssr2786 Forward -124 -105 2.85105 0.298
slr0457 Reverse -352 -371 10.5209 0.17
slr0457 Forward -82 -63 4.62101 0.274
slr0458 Reverse -168 -187 7.37428 0.208
slr1183 Reverse -369 -388 11.6025 0.156
sll0578 Forward -207 -188 7.7676 0.203
sll0577 Forward -305 -286 3.34271 0.289
slr0589 Reverse -313 -332 3.34271 0.289
slr0590 Reverse -129 -148 10.2259 0.175
sll5002 Reverse -121 -140 18.3873 0.0502
sll5014 Reverse -58 -77 5.60432 0.241
ssl5015 Forward -168 -149 7.27595 0.209
slr5016 Forward -306 -287 5.60432 0.241
sll5028 Reverse -127 -146 6.19431 0.233
slr5029 Forward -282 -263 6.19431 0.233
sll5035 Forward -317 -298 7.57094 0.206
slr5038 Forward -105 -86 7.27595 0.209
sll5047 Reverse -113 -132 12.8808 0.127
sll5050 Reverse -64 -83 5.80098 0.24
slr5051 Forward -27 -8 5.80098 0.24
slr5058 Reverse -354 -373 7.96426 0.203
sll5059 Forward -221 -202 12.2908 0.127
sll5061 Forward -346 -327 19.6656 0.0502
sll5072 Reverse -10 -29 7.7676 0.203
slr5073 Forward -225 -206 7.7676 0.203
sll5080 Reverse -331 -350 5.01433 0.266
sll5083 Reverse -270 -289 10.7175 0.164
slr5085 Reverse -324 -343 2.85105 0.298
sll5097 Forward -236 -217 5.80098 0.24
ssl7020 Reverse -224 -243 5.01433 0.266
sll7030 Forward -163 -144 9.14423 0.181
ssl7046 Reverse -363 -382 8.84924 0.186
ssl7051 Reverse -280 -299 3.34271 0.289
sll7078 Forward -321 -302 8.45592 0.197
sll7085 Reverse -45 -64 11.0125 0.159
sll7086 Forward -158 -139 4.03102 0.278
slr7096 Forward -390 -371 9.3409 0.181
slr7100 Reverse -338 -357 8.94757 0.181
slr7104 Forward -306 -287 4.52268 0.274
sll8018 Reverse -356 -375 4.03102 0.278
slr8037 Reverse -10 -29 9.0459 0.181
slr8045 Forward -396 -377 4.03102 0.278
sll8048 Forward -223 -204 6.58763 0.225
slr6007 Reverse -328 -347 3.73603 0.279
slr6040 Forward -204 -185 6.88262 0.214
slr6042 Forward -186 -167 19.3707 0.0502
slr6066 Reverse -328 -347 3.73603 0.279
6803t01 Forward -181 -162 9.14423 0.181
6803t02 Forward -273 -254 4.32602 0.278
6803t13 Forward -184 -165 7.7676 0.203
6803t13 Forward -397 -378 3.24438 0.29
6803t16 Forward -219 -200 7.27595 0.209
6803t33 Forward -203 -184 9.63589 0.181
sllt43 Reverse -306 -325 3.6377 0.279
6803t38 Forward -88 -69 3.04771 0.294
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.917  0.083  
0.000 0.833 0.000 0.167
0.000 1.000 0.000 0.000
0.750 0.083 0.167 0.000
0.333 0.667 0.000 0.000
0.083 0.167 0.417 0.333
0.083 0.167 0.750 0.000
0.083 0.833 0.000 0.083
0.000 0.750 0.000 0.250
0.083 0.917 0.000 0.000
1.000 0.000 0.000 0.000
0.417 0.000 0.583 0.000
0.000 0.000 1.000 0.000
0.083 0.750 0.167 0.000
0.333 0.250 0.333 0.083
0.500 0.083 0.417 0.000
0.000 0.000 0.000 1.000
0.000 0.667 0.000 0.333
0.167 0.083 0.583 0.167
0.917 0.083 0.000 0.000