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Details for NP_442772.1_4

Name NP_442772.1_4
Length 20
Regular expression GCTAATTC[CT]T[GCT][AG]GC[AG]AA[AGT]GC
Central Yes

Motif logo

Genes containing this motif

66 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1041 Forward -377 -358 -3.24547 0.244
slr1778 Reverse -361 -380 2.16274 0.217
slr1305 Forward -346 -327 -3.04881 0.231
sll0936 Forward -244 -225 -2.36049 0.22
slr0980 Reverse -98 -117 -2.36049 0.22
slr1072 Forward -182 -163 -4.32711 0.249
sll0646 Forward -236 -217 -3.83545 0.244
slr1604 Reverse -266 -285 -4.22878 0.249
sll1640 Reverse -154 -173 -4.22878 0.249
slr1034 Reverse -304 -323 -5.31042 0.295
sll1283 Forward -53 -34 -3.73712 0.244
slr1699 Reverse -95 -114 -3.73712 0.244
ssl3093 Forward -368 -349 -2.75381 0.229
sll1069 Reverse -328 -347 2.55606 0.217
ssl3432 Reverse -367 -386 -2.85214 0.23
slr1209 Forward -329 -310 -3.93378 0.244
sll1735 Reverse -253 -272 -5.21209 0.295
sll1464 Reverse -44 -63 -4.52377 0.249
slr1752 Reverse -292 -311 -4.42544 0.249
sll1144 Forward -323 -304 -3.93378 0.244
slr1219 Reverse -339 -358 -3.93378 0.244
ssr2422 Forward -27 -8 -2.26216 0.22
slr0884 Forward -350 -331 2.45773 0.217
slr1861 Forward -122 -103 4.52268 0.217
sll1764 Forward -303 -284 15.2408 0.0522
ssr3189 Reverse -362 -381 -1.86883 0.22
sll1163 Forward -35 -16 -4.32711 0.249
ssl3127 Reverse -45 -64 -4.52377 0.249
sll1980 Reverse -202 -221 -2.75381 0.229
sll1994a Forward -173 -154 -4.81876 0.268
slr1332 Reverse -309 -328 -5.01543 0.282
sll1244 Forward -363 -344 -3.73712 0.244
slr1971 Reverse -202 -221 -3.04881 0.231
sll1383 Forward -277 -258 -4.72043 0.262
slr1269 Reverse -348 -367 -5.21209 0.295
sll1531 Reverse -177 -196 -4.91709 0.276
sll0426 Forward -215 -196 -5.31042 0.295
sll0269 Reverse -302 -321 -3.73712 0.244
sll0142 Reverse -32 -51 -4.42544 0.249
sll0136 Reverse -97 -116 -3.54046 0.244
sll1853 Reverse -347 -366 2.94938 0.217
slr0992 Forward -205 -186 -2.65548 0.229
slr0376 Reverse -287 -306 3.73603 0.217
sll0018 Reverse -297 -316 -5.31042 0.295
slr0217 Forward -398 -379 -2.26216 0.22
slr0192 Forward -67 -48 -3.93378 0.244
slr0106 Reverse -295 -314 6.39097 0.205
slr0299 Reverse -33 -52 -3.54046 0.244
slr0315 Forward -90 -71 6.19431 0.205
sll0792 Reverse -169 -188 -3.63879 0.244
sll0660 Reverse -210 -229 -4.52377 0.249
slr0713 Forward -90 -71 -4.52377 0.249
slr0552 Forward -21 -2 -4.52377 0.249
sll0528 Forward -162 -143 -1.47551 0.22
sll0525 Forward -138 -119 -3.04881 0.231
sll1544 Forward -336 -317 -4.03212 0.249
sll5002 Reverse -294 -313 -4.42544 0.249
slr5024 Reverse -220 -239 2.65439 0.217
sll5067 Reverse -198 -217 -4.42544 0.249
slr5078 Reverse -170 -189 1.86774 0.217
ssr5120 Reverse -163 -182 3.73603 0.217
slr7014 Reverse -376 -395 3.24438 0.217
slr7102 Forward -230 -211 -3.63879 0.244
6803t20 Reverse -233 -252 -4.72043 0.262
6803t26 Forward -358 -339 2.94938 0.217
6803t28 Reverse -311 -330 -3.63879 0.244
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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