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Details for NP_442693.1_6

Name NP_442693.1_6
Length 20
Regular expression C[ACG]GC[CG]A[AG][AGC]CCATC[CAG]GC[CTG]GT[AG]
Central No

Motif logo

Genes containing this motif

171 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Forward -188 -169 2.0644 0.278
sll1394 Forward -328 -309 1.67108 0.278
sll1054 Forward -51 -32 6.78429 0.278
slr0724 Forward -115 -96 -0.787193 0.297
slr0743a Forward -111 -92 1.0811 0.278
sll0225 Reverse -375 -394 0.392778 0.278
sll1323 Forward -74 -55 -0.0988766 0.278
sll1041 Reverse -74 -93 1.86774 0.278
slr1101 Reverse -60 -79 -0.4922 0.29
slr1777 Reverse -225 -244 0.196116 0.278
slr1778 Forward -294 -275 -0.4922 0.29
sll1682 Forward -258 -239 1.57275 0.278
sll1659 Forward -336 -317 5.60432 0.278
sll1655 Reverse -78 -97 1.47442 0.278
sll1201 Reverse -32 -51 1.57275 0.278
slr1291 Forward -194 -175 1.57275 0.278
sll1193 Forward -148 -129 4.03102 0.278
sll1185 Reverse -237 -256 5.99764 0.278
sll1184 Reverse -357 -376 3.04771 0.278
slr0964 Forward -327 -308 1.0811 0.278
sll0939 Reverse -123 -142 1.86774 0.278
slr0974 Forward -278 -259 -0.590531 0.291
slr0977 Reverse -80 -99 12.3892 0.278
sll0640 Reverse -102 -121 -0.0988766 0.278
slr0688 Forward -250 -231 4.916 0.278
ssr2699 Forward -258 -239 0.294447 0.278
sll1005 Reverse -204 -223 -0.000545616 0.278
slr2032 Forward -190 -171 2.94938 0.278
slr2051 Forward -151 -132 2.26107 0.278
slr1022 Forward -331 -312 1.76941 0.278
slr1376 Reverse -307 -326 1.47442 0.278
ssl2542 Reverse -256 -275 0.786102 0.278
slr1393 Reverse -223 -242 -0.000545616 0.278
sll1286 Forward -86 -67 2.3594 0.278
sll1283 Reverse -330 -349 9.63589 0.278
sll1283 Forward -210 -191 1.27776 0.278
ssr2843 Forward -398 -379 2.65439 0.278
sll1580 Reverse -231 -250 -0.787193 0.297
sll1572 Forward -365 -346 7.27595 0.278
slr1710 Forward -129 -110 2.94938 0.278
sll1921 Reverse -108 -127 2.94938 0.278
slr2025 Reverse -177 -196 -0.688862 0.295
slr2027 Reverse -245 -264 0.884433 0.278
slr1149 Reverse -333 -352 -0.000545616 0.278
ssl2233 Forward -186 -167 0.392778 0.278
sll1124 Forward -396 -377 1.96607 0.278
sll1123 Reverse -335 -354 4.12936 0.278
sll1119 Forward -289 -270 -0.4922 0.29
sll1968 Forward -345 -326 1.27776 0.278
sll1740 Reverse -152 -171 -0.590531 0.291
slr1535 Forward -227 -208 1.57275 0.278
ssr2595 Reverse -366 -385 -0.4922 0.29
slr1545 Reverse -271 -290 -1.08219 0.297
slr1219 Forward -188 -169 5.40766 0.278
slr1236 Reverse -274 -293 9.3409 0.278
slr1240 Reverse -321 -340 3.14605 0.278
sll1280 Forward -277 -258 3.04771 0.278
slr1356 Reverse -117 -136 3.04771 0.278
sll1275 Reverse -277 -296 -0.590531 0.291
slr0880 Reverse -378 -397 -0.39387 0.29
slr0883 Reverse -174 -193 4.42435 0.278
slr1409 Forward -278 -259 -1.08219 0.297
sll1760 Forward -100 -81 9.0459 0.278
slr1880 Reverse -160 -179 9.0459 0.278
sll2015 Forward -161 -142 -0.787193 0.297
sll2013 Forward -42 -23 0.884433 0.278
sll1710 Reverse -273 -292 0.0977854 0.278
sll1689 Reverse -98 -117 -1.08219 0.297
sll1623 Reverse -199 -218 6.19431 0.278
slr1739 Forward -298 -279 -0.983855 0.297
sll0839 Forward -90 -71 5.70265 0.278
slr2001 Forward -340 -321 5.50599 0.278
slr2004 Forward -140 -121 3.93269 0.278
slr1723 Forward -159 -140 0.392778 0.278
sll1599 Reverse -224 -243 3.44104 0.278
slr0262 Forward -391 -372 3.93269 0.278
sll1973 Forward -248 -229 -0.000545616 0.278
ssr2554 Reverse -261 -280 -0.885524 0.297
slr0807 Reverse -306 -325 3.73603 0.278
slr0813 Reverse -341 -360 -1.08219 0.297
slr0818 Forward -175 -156 0.196116 0.278
ssr1391 Reverse -73 -92 -0.4922 0.29
sll1260 Reverse -280 -299 4.42435 0.278
slr1336 Forward -203 -184 4.42435 0.278
ssl3549 Forward -243 -224 5.50599 0.278
slr1978 Reverse -42 -61 7.07928 0.278
slr1978 Reverse -304 -323 0.392778 0.278
slr1983 Forward -362 -343 -1.08219 0.297
slr1281 Forward -178 -159 3.93269 0.278
slr1174 Forward -53 -34 0.491109 0.278
sll0912 Forward -61 -42 0.294447 0.278
slr0949 Reverse -225 -244 0.294447 0.278
slr0949 Reverse -364 -383 -0.0988766 0.278
slr0955 Reverse -381 -400 6.88262 0.278
slr1628 Forward -339 -320 3.14605 0.278
slr1639 Forward -369 -350 2.26107 0.278
slr1647 Reverse -217 -236 -0.295539 0.288
sll0427 Forward -353 -334 9.0459 0.278
slr1001 Reverse -241 -260 0.294447 0.278
ssr0256 Forward -49 -30 0.294447 0.278
slr0166 Forward -224 -205 0.294447 0.278
slr1936 Reverse -246 -265 -0.0988766 0.278
slr1940 Reverse -254 -273 3.73603 0.278
slr1946 Reverse -371 -390 7.66927 0.278
slr0326 Reverse -93 -112 4.81767 0.278
ssl0564 Forward -303 -284 -0.4922 0.29
slr0168 Reverse -340 -359 1.0811 0.278
sll0167 Reverse -56 -75 1.67108 0.278
sll0161 Forward -224 -205 0.294447 0.278
ssl0296 Forward -49 -30 0.294447 0.278
slr0362 Forward -398 -379 -0.983855 0.297
slr0376 Reverse -348 -367 -1.08219 0.297
slr0380 Reverse -365 -384 -0.197208 0.282
sll0750 Forward -203 -184 5.50599 0.278
sll0749 Forward -93 -74 -0.983855 0.297
slr0783 Reverse -96 -115 -0.983855 0.297
ssl0788 Forward -31 -12 -0.590531 0.291
sll0412 Forward -368 -349 0.687771 0.278
sll0404 Forward -345 -326 5.11266 0.278
sll0462 Reverse -57 -76 2.0644 0.278
sll0459 Forward -129 -110 3.6377 0.278
slr0476 Reverse -63 -82 3.6377 0.278
sll0683 Reverse -104 -123 2.85105 0.278
sll0397 Forward -320 -301 -0.197208 0.282
slr0204 Reverse -354 -373 1.96607 0.278
slr0210 Forward -378 -359 -0.983855 0.297
sll0830 Forward -304 -285 1.47442 0.278
slr0839 Forward -335 -316 0.196116 0.278
slr0073 Forward -223 -204 0.982764 0.278
slr0083 Reverse -103 -122 1.67108 0.278
sll0080 Forward -384 -365 -0.688862 0.295
sll0481 Reverse -170 -189 0.982764 0.278
slr0615 Forward -311 -292 2.0644 0.278
slr0299 Reverse -106 -125 3.53937 0.278
sll0662 Forward -262 -243 -1.08219 0.297
slr0036 Reverse -263 -282 2.55606 0.278
sll0493 Forward -109 -90 0.0977854 0.278
sll0900 Forward -36 -17 4.03102 0.278
sll0895 Forward -73 -54 9.93088 0.278
slr0546 Reverse -360 -379 9.93088 0.278
slr1425 Forward -283 -264 1.0811 0.278
slr1454 Reverse -206 -225 0.687771 0.278
slr0661 Reverse -236 -255 1.57275 0.278
slr0661 Reverse -319 -338 0.58944 0.278
slr1562 Forward -230 -211 0.196116 0.278
slr1577 Forward -111 -92 0.687771 0.278
sll1485 Forward -175 -156 6.19431 0.278
sll1485 Forward -297 -278 5.01433 0.278
sll1485 Forward -32 -13 3.93269 0.278
sll1484 Reverse -312 -331 5.211 0.278
sll0729 Reverse -211 -230 1.67108 0.278
slr1653 Reverse -294 -313 1.67108 0.278
sll0451 Forward -230 -211 0.491109 0.278
sll0451 Forward -196 -177 -0.787193 0.297
sll0441 Forward -219 -200 10.4225 0.278
slr0609 Forward -222 -203 5.30933 0.278
slr0609 Forward -327 -308 3.24438 0.278
slr0609 Reverse -368 -387 -0.4922 0.29
sll5049 Reverse -303 -322 13.2741 0.278
sll5059 Reverse -170 -189 -0.983855 0.297
slr5073 Reverse -297 -316 1.96607 0.278
ssl5100 Forward -130 -111 3.53937 0.278
slr5101 Reverse -91 -110 3.53937 0.278
sll5131 Reverse -164 -183 3.14605 0.278
ssl7021 Reverse -126 -145 1.67108 0.278
slr7023 Forward -361 -342 1.67108 0.278
slr7025 Forward -314 -295 -0.885524 0.297
ssl7039 Reverse -171 -190 4.42435 0.278
slr7041 Forward -189 -170 4.42435 0.278
sll7047 Forward -398 -379 4.12936 0.278
sll7047 Reverse -201 -220 0.0977854 0.278
ssl7048 Forward -126 -107 4.12936 0.278
slr7049 Reverse -79 -98 4.12936 0.278
slr7049 Forward -276 -257 0.0977854 0.278
slr7083 Forward -209 -190 0.58944 0.278
sll8027 Reverse -147 -166 0.0977854 0.278
slr8029 Forward -289 -270 0.0977854 0.278
sll8048 Reverse -100 -119 0.392778 0.278
ssl6035 Reverse -290 -309 1.37609 0.278
6803t10 Reverse -306 -325 -0.688862 0.295
6803t17 Reverse -255 -274 1.17943 0.278
6803t18 Forward -266 -247 4.32602 0.278
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.375 0.375 0.250 0.000
0.000 0.125 0.875 0.000
0.000 1.000 0.000 0.000
0.125 0.625 0.250 0.000
1.000 0.000 0.000 0.000
0.500 0.000 0.500 0.000
0.375 0.250 0.375 0.000
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000
0.125 0.000 0.000 0.875
0.000 1.000 0.000 0.000
0.250 0.375 0.250 0.125
0.000 0.125 0.875 0.000
0.000 0.875 0.000 0.125
0.000 0.375 0.250 0.375
0.000 0.000 1.000 0.000
0.000 0.000 0.125 0.875
0.500 0.000 0.500 0.000