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Details for NP_442643.1_1

Name NP_442643.1_1
Length 20
Regular expression TGGTA[CT]GGCGGTCG[CG][CT]T[GAC]GG
Central Yes

Motif logo

Genes containing this motif

221 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1485 Reverse -239 -258 -11.8986 0.235
sll1396 Reverse -278 -297 -6.58872 0.231
slr1498 Forward -128 -109 -6.58872 0.231
sll1049 Forward -314 -295 -0.983855 0.143
sll1049 Reverse -299 -318 -11.8986 0.235
sll0716 Forward -307 -288 -10.3253 0.231
slr0728 Forward -220 -201 -9.63698 0.231
sll0703 Forward -39 -20 -12.1936 0.253
sll1321 Forward -179 -160 -11.3086 0.231
slr1413 Reverse -20 -39 -11.3086 0.231
slr1097 Reverse -91 -110 -10.227 0.231
sll1029 Forward -147 -128 -0.000545616 0.143
slr1776 Forward -389 -370 -11.6036 0.231
sll1680 Reverse -78 -97 -11.1119 0.231
sll1666 Reverse -179 -198 -11.2103 0.231
slr1799 Reverse -142 -161 -12.3902 0.256
sll1201 Forward -53 -34 -11.7019 0.231
slr1291 Reverse -173 -192 -11.7019 0.231
slr1302 Forward -63 -44 -3.83545 0.223
slr0980 Forward -124 -105 -10.6203 0.231
sll0656 Reverse -188 -207 -9.73531 0.231
sll1509 Forward -135 -116 -11.4069 0.231
slr1599 Reverse -231 -250 -11.4069 0.231
slr1600 Forward -316 -297 -10.1286 0.231
sll1642 Reverse -291 -310 -11.6036 0.231
ssr3452 Reverse -232 -251 -11.1119 0.231
sll1942 Forward -102 -83 -11.3086 0.231
slr2044 Reverse -83 -102 -11.1119 0.231
slr2053 Forward -261 -242 -10.1286 0.231
sll1933 Reverse -326 -345 -12.8819 0.289
slr1912 Forward -360 -341 -10.6203 0.231
slr1032 Forward -298 -279 -12.2919 0.255
slr1034 Forward -267 -248 -4.52377 0.231
sll1299 Reverse -39 -58 -11.1119 0.231
sll1298 Reverse -61 -80 -11.7019 0.231
ssr2315 Forward -211 -192 -11.7019 0.231
sll1290 Reverse -316 -335 -11.0136 0.231
sll1283 Forward -210 -191 -12.5869 0.268
slr1708 Forward -165 -146 -1.27885 0.143
slr2012 Reverse -57 -76 -1.08219 0.143
sll1917 Reverse -104 -123 -13.0786 0.293
slr2026 Forward -334 -315 -11.3086 0.231
slr1133 Forward -117 -98 -6.78538 0.231
slr1135 Forward -107 -88 -11.3086 0.231
sll1076 Reverse -203 -222 -10.817 0.231
ssl3446 Reverse -68 -87 -1.7705 0.143
sll1789 Forward -77 -58 -2.16383 0.147
sll1123 Reverse -335 -354 -0.000545616 0.143
sll1118 Forward -350 -331 -8.752 0.231
slr1198 Reverse -168 -187 -8.752 0.231
sll1737 Forward -107 -88 -11.4069 0.231
slr1828 Reverse -143 -162 -11.4069 0.231
slr1535 Reverse -218 -237 -1.96717 0.144
ssl2823 Reverse -286 -305 -12.3902 0.256
sll1463 Forward -261 -242 -12.9802 0.291
slr1549 Forward -285 -266 -11.0136 0.231
sll1451 Reverse -209 -228 -4.03212 0.226
slr1219 Reverse -167 -186 -10.522 0.231
slr1220 Reverse -3 -22 -0.295539 0.143
ssr2060 Forward -200 -181 -10.227 0.231
sll1127 Forward -161 -142 -10.7186 0.231
slr1239 Reverse -40 -59 -10.7186 0.231
sll1360 Reverse -231 -250 -4.32711 0.231
ssr2422 Forward -334 -315 -1.86883 0.143
sll0876 Forward -63 -44 -9.34199 0.231
slr0878 Forward -140 -121 -11.2103 0.231
slr1870 Reverse -377 -396 -11.7019 0.231
sll1768 Forward -211 -192 7.96426 0.085
slr1886 Reverse -181 -200 -2.95047 0.187
sll2008 Forward -39 -20 -1.7705 0.143
slr2135 Reverse -126 -145 -1.7705 0.143
slr2135 Forward -329 -310 -1.86883 0.143
sll1702 Reverse -203 -222 -11.1119 0.231
slr1813 Reverse -75 -94 -11.6036 0.231
sll1624 Reverse -253 -272 -11.6036 0.231
slr1736 Reverse -206 -225 -2.16383 0.147
slr1746 Reverse -171 -190 -11.4069 0.231
sll0848 Forward -124 -105 -10.0303 0.231
slr0872 Forward -211 -192 -12.2919 0.255
slr1255 Reverse -84 -103 -13.0786 0.293
slr1994 Forward -132 -113 0.0977854 0.143
slr1994 Forward -144 -125 -2.55715 0.165
slr2003 Forward -368 -349 -6.09707 0.231
sll1615 Reverse -228 -247 -10.6203 0.231
ssr2898 Reverse -185 -204 -10.522 0.231
sll0253 Reverse -220 -239 -11.9969 0.24
slr0262 Forward -61 -42 -8.06369 0.231
ssl0453 Forward -307 -288 -11.7019 0.231
ssl0452 Forward -32 -13 -11.7019 0.231
ssl0452 Reverse -258 -277 -11.8986 0.235
slr0271 Forward -326 -307 -11.8986 0.235
slr1517 Forward -331 -312 -12.3902 0.256
sll1234 Reverse -59 -78 -11.8986 0.235
ssr2201 Forward -222 -203 -11.8986 0.235
sll1223 Forward -360 -341 -12.5869 0.268
slr0809 Forward -263 -244 -11.9969 0.24
sll0818 Reverse -111 -130 -12.2919 0.255
slr0812 Reverse -235 -254 -12.3902 0.256
ssr1391 Forward -51 -32 -10.7186 0.231
slr0820 Forward -181 -162 -11.9969 0.24
slr1958 Forward -178 -159 -4.42544 0.231
slr1964 Forward -193 -174 -13.0786 0.293
ssl3549 Reverse -332 -351 -10.817 0.231
sll1869 Forward -67 -48 -10.9153 0.231
slr1984 Reverse -83 -102 -10.9153 0.231
smr0011 Reverse -74 -93 -10.9153 0.231
slr1469 Reverse -221 -240 -10.9153 0.231
slr1470 Reverse -226 -245 -11.8986 0.235
sll1372 Reverse -87 -106 -12.7836 0.284
sll1178 Forward -207 -188 8.75091 0.085
slr1278 Reverse -154 -173 -3.83545 0.223
ssl2162 Reverse -222 -241 -12.4886 0.263
sll1102 Reverse -255 -274 -12.8819 0.289
ssr2799 Forward -168 -149 -1.37718 0.143
slr1686 Forward -338 -319 -12.5869 0.268
slr0941 Reverse -166 -185 -12.0953 0.245
slr0945 Reverse -89 -108 -11.1119 0.231
sll1537 Forward -356 -337 -10.817 0.231
slr1627 Reverse -122 -141 -10.817 0.231
sll1526 Forward -343 -324 -12.2919 0.255
sll0423 Reverse -237 -256 -1.86883 0.143
sll0419 Forward -318 -299 -8.752 0.231
sll0266 Reverse -140 -159 -11.3086 0.231
sll0257 Forward -236 -217 -11.1119 0.231
slr0404 Reverse -380 -399 -13.0786 0.293
sll0142 Forward -339 -320 -3.93378 0.223
slr0162 Reverse -311 -330 -10.817 0.231
slr1926 Reverse -347 -366 -11.0136 0.231
slr1934 Reverse -222 -241 -9.83364 0.231
sll1852 Forward -135 -116 -0.590531 0.143
sll0297 Forward -108 -89 -9.73531 0.231
sll0295 Forward -109 -90 -12.9802 0.291
slr0335 Reverse -182 -201 -12.9802 0.291
slr0366 Reverse -368 -387 -9.73531 0.231
slr0379 Forward -288 -269 -3.63879 0.223
sll0329 Reverse -99 -118 -11.8986 0.235
sll0328 Forward -243 -224 -5.01543 0.231
slr0769 Reverse -126 -145 -10.7186 0.231
sll0767 Forward -383 -364 -6.88371 0.231
ssl1426 Forward -39 -20 -6.88371 0.231
slr1003 Reverse -345 -364 -9.63698 0.231
sll0755 Reverse -62 -81 -11.2103 0.231
slr0784 Forward -238 -219 -3.63879 0.223
slr0342 Reverse -285 -304 -9.24366 0.231
slr0358 Forward -266 -247 -10.817 0.231
sll0309 Reverse -350 -369 -10.817 0.231
sll0017 Reverse -274 -293 -11.1119 0.231
sll0007 Forward -117 -98 -11.2103 0.231
slr0214 Forward -229 -210 -11.3086 0.231
slr0222 Reverse -181 -200 -0.39387 0.143
sll0410 Forward -163 -144 -0.590531 0.143
slr0058 Forward -53 -34 -10.6203 0.231
sll0055 Reverse -310 -329 -10.7186 0.231
slr0489 Forward -337 -318 -1.08219 0.143
slr0496 Forward -149 -130 -1.7705 0.143
sll0613 Reverse -246 -265 -9.83364 0.231
slr0645 Forward -197 -178 -10.6203 0.231
sll0396 Forward -334 -315 -11.4069 0.231
sll0377 Reverse -14 -33 -6.88371 0.231
slr0208 Forward -350 -331 -12.0953 0.245
sll0178 Reverse -324 -343 -8.85033 0.231
ssr1528 Reverse -347 -366 -10.522 0.231
slr0581 Forward -199 -180 -10.4236 0.231
sll0833 Reverse -300 -319 -10.522 0.231
slr0833 Reverse -136 -155 -11.1119 0.231
slr0836 Reverse -364 -383 -11.6036 0.231
sll0829 Forward -358 -339 -12.9802 0.291
slr0072 Reverse -83 -102 -11.2103 0.231
slr0073 Reverse -221 -240 -10.6203 0.231
slr0079 Forward -22 -3 -12.3902 0.256
slr0095 Forward -326 -307 -11.5053 0.231
sll0489 Forward -174 -155 -12.2919 0.255
slr0500 Reverse -113 -132 -12.2919 0.255
sll0480 Reverse -311 -330 -12.3902 0.256
slr0509 Forward -387 -368 -11.8986 0.235
sll0596 Forward -372 -353 -11.5053 0.231
sll0594 Forward -211 -192 -12.8819 0.289
sll0590 Reverse -204 -223 -0.983855 0.143
slr0618 Forward -47 -28 -0.983855 0.143
sll0585 Forward -283 -264 -12.0953 0.245
sll0095 Forward -177 -158 -10.227 0.231
sll0092 Reverse -99 -118 -11.7019 0.231
slr0118 Forward -157 -138 -11.7019 0.231
sll0787 Forward -300 -281 34.9069 0.0000259
sll0509 Reverse -197 -216 -11.0136 0.231
sll0505 Reverse -226 -245 -2.26216 0.149
sll0505 Reverse -44 -63 -8.26035 0.231
sll0900 Reverse -67 -86 -11.8003 0.235
sll0537 Reverse -149 -168 -13.0786 0.293
slr0552 Reverse -148 -167 -11.7019 0.231
slr1461 Forward -222 -203 -11.7019 0.231
sll1363 Reverse -177 -196 -11.7019 0.231
slr0652 Forward -300 -281 -11.7019 0.231
sll0623 Forward -134 -115 -10.4236 0.231
sll0621 Reverse -221 -240 -11.4069 0.231
ssr1114 Forward -64 -45 -11.4069 0.231
slr0664 Forward -314 -295 -11.4069 0.231
slr0752 Reverse -166 -185 -11.0136 0.231
slr0755 Forward -213 -194 -11.8986 0.235
slr1666 Reverse -321 -340 -1.37718 0.143
slr1666 Reverse -71 -90 -12.9802 0.291
slr1183 Forward -212 -193 -12.5869 0.268
sll0564 Reverse -6 -25 -10.4236 0.231
slr0598 Forward -39 -20 -10.4236 0.231
slr0599 Forward -381 -362 -10.4236 0.231
slr0605 Reverse -51 -70 -11.1119 0.231
ssl5015 Reverse -142 -161 -0.688862 0.143
slr5021 Forward -124 -105 -10.522 0.231
ssl5027 Reverse -308 -327 -11.7019 0.231
sll5049 Reverse -216 -235 -11.2103 0.231
ssl5100 Reverse -354 -373 -10.9153 0.231
slr5102 Forward -297 -278 -10.9153 0.231
ssr5121 Forward -137 -118 -10.817 0.231
slr7032 Forward -299 -280 -5.21209 0.231
sll7069 Forward -27 -8 -6.39206 0.231
sll7090 Reverse -374 -393 -4.91709 0.231
slr7092 Forward -115 -96 -4.91709 0.231
slr7096 Reverse -316 -335 -10.522 0.231
sll8025 Forward -167 -148 -10.522 0.231
sll8032 Reverse -119 -138 -3.93378 0.223
ssl6018 Forward -138 -119 -10.817 0.231
ssr6020 Reverse -285 -304 -10.817 0.231
slr6042 Reverse -160 -179 -10.6203 0.231
ssl6077 Forward -138 -119 -10.817 0.231
ssr6079 Reverse -285 -304 -10.817 0.231
6803t26 Reverse -90 -109 -0.590531 0.143
6803t28 Reverse -167 -186 -9.63698 0.231
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 0.000 1.000
1.000 0.000 0.000 0.000
0.000 0.571 0.000 0.429
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.857 0.000 0.143
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.143 0.000 0.000 0.857
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.000 0.714 0.286 0.000
0.000 0.571 0.000 0.429
0.000 0.000 0.000 1.000
0.286 0.286 0.429 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000