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Details for NP_442598.1_2

Name NP_442598.1_2
Length 10
Regular expression [CG]TTTTTTTTG
Central No

Motif logo

Genes containing this motif

121 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1393 Reverse -199 -208 14.2577 0.252
sll0700 Reverse -164 -173 14.2577 0.252
sll0222 Forward -191 -182 14.2577 0.252
slr0254 Reverse -330 -339 14.2577 0.252
sll0216 Forward -171 -162 14.5527 0.252
sll0930 Reverse -358 -367 13.7661 0.296
slr0982 Forward -162 -153 15.7327 0.252
slr1084 Forward -46 -37 13.7661 0.296
sll0651 Reverse -164 -173 14.2577 0.252
slr2047 Forward -99 -90 14.2577 0.252
slr2052 Forward -221 -212 16.5193 0.252
sll1930 Reverse -164 -173 14.2577 0.252
sll1283 Forward -397 -388 14.5527 0.252
sll1583 Reverse -182 -191 14.2577 0.252
ssr2848 Forward -12 -3 14.2577 0.252
sll1570 Forward -85 -76 14.2577 0.252
slr1148 Reverse -96 -105 14.5527 0.252
sll1071 Forward -100 -91 16.5193 0.252
slr1204 Reverse -93 -102 16.5193 0.252
slr1538 Forward -75 -66 14.2577 0.252
slr1222 Reverse -62 -71 13.7661 0.296
sll1138 Forward -271 -262 16.5193 0.252
slr1227 Forward -72 -63 13.7661 0.296
sll1360 Forward -66 -57 16.5193 0.252
slr1440 Reverse -102 -111 16.5193 0.252
sll1350 Reverse -182 -191 14.2577 0.252
sll1784 Forward -176 -167 16.5193 0.252
slr1861 Forward -395 -386 14.2577 0.252
slr1803 Reverse -206 -215 14.2577 0.252
sll1697 Forward -306 -297 16.5193 0.252
sll1695 Forward -34 -25 16.5193 0.252
sll1624 Reverse -285 -294 13.7661 0.296
slr0857 Reverse -164 -173 14.2577 0.252
sll1165 Forward -344 -335 15.7327 0.252
sll1611 Forward -399 -390 14.2577 0.252
slr1716 Reverse -164 -173 14.2577 0.252
sll0237 Reverse -347 -356 16.5193 0.252
ssl0438 Reverse -3 -12 16.5193 0.252
sll1984 Reverse -164 -173 14.2577 0.252
slr2092 Forward -339 -330 14.0611 0.268
slr1522 Reverse -58 -67 14.0611 0.268
slr2113 Reverse -164 -173 14.2577 0.252
slr2117 Reverse -37 -46 14.2577 0.252
sll1219 Reverse -341 -350 14.2577 0.252
sll0812 Forward -243 -234 14.2577 0.252
ssr1386 Reverse -219 -228 14.2577 0.252
slr0822 Forward -343 -334 15.7327 0.252
sll1257 Reverse -164 -173 14.2577 0.252
sll1899 Forward -17 -8 14.8477 0.252
sll1389 Forward -10 -1 14.2577 0.252
sll1380 Reverse -371 -380 16.5193 0.252
sll1376 Forward -100 -91 15.7327 0.252
sll1437 Reverse -164 -173 14.2577 0.252
sll1098 Forward -38 -29 14.5527 0.252
sll1560 Forward -262 -253 14.8477 0.252
slr1684 Reverse -379 -388 14.8477 0.252
sll1538 Forward -101 -92 15.7327 0.252
slr1639 Reverse -371 -380 13.7661 0.296
slr1005 Forward -280 -271 14.8477 0.252
sll0261 Forward -16 -7 14.2577 0.252
slr0284 Reverse -283 -292 14.2577 0.252
sll0260 Forward -242 -233 14.2577 0.252
ssr0482 Reverse -48 -57 14.2577 0.252
slr0287 Reverse -337 -346 14.2577 0.252
slr0288 Forward -88 -79 13.7661 0.296
slr0399 Forward -162 -153 14.5527 0.252
sll1851 Forward -292 -283 14.2577 0.252
slr1937 Reverse -164 -173 14.2577 0.252
slr1944 Forward -367 -358 14.2577 0.252
slr0172 Reverse -34 -43 16.5193 0.252
sll0171 Forward -72 -63 14.2577 0.252
sll0169 Forward -154 -145 15.7327 0.252
sll0167 Reverse -316 -325 14.5527 0.252
slr0364 Forward -252 -243 15.7327 0.252
slr0377 Forward -15 -6 16.5193 0.252
sll0327 Forward -373 -364 14.0611 0.268
slr0341 Forward -116 -107 14.2577 0.252
sll0317 Forward -329 -320 14.2577 0.252
sll0201 Reverse -164 -173 14.2577 0.252
slr0058 Reverse -111 -120 16.5193 0.252
sll0380 Reverse -10 -19 14.2577 0.252
slr0199 Forward -58 -49 16.5193 0.252
slr0901 Forward -222 -213 14.2577 0.252
slr0905 Reverse -17 -26 14.2577 0.252
ssl1046 Forward -165 -156 14.5527 0.252
slr0573 Reverse -32 -41 14.5527 0.252
ssl1533 Forward -127 -118 14.2577 0.252
slr0845 Reverse -84 -93 14.2577 0.252
slr0096 Reverse -162 -171 14.2577 0.252
ssr0871 Reverse -53 -62 14.0611 0.268
slr0511 Reverse -267 -276 14.0611 0.268
sll0595 Forward -50 -41 15.7327 0.252
slr0099 Reverse -58 -67 14.0611 0.268
ssl0172 Reverse -379 -388 14.8477 0.252
sll0677 Forward -106 -97 16.5193 0.252
slr0703 Reverse -151 -160 14.2577 0.252
slr0032 Forward -18 -9 16.5193 0.252
sll0026 Reverse -342 -351 13.7661 0.296
sll0897 Forward -381 -372 14.2577 0.252
slr0551 Reverse -161 -170 14.5527 0.252
ssl1004 Forward -164 -155 14.0611 0.268
slr1579 Reverse -273 -282 15.7327 0.252
slr1579 Reverse -389 -398 14.8477 0.252
sll1547 Forward -400 -391 13.7661 0.296
slr0456 Reverse -11 -20 14.2577 0.252
slr0460 Reverse -58 -67 14.0611 0.268
ssr0817 Forward -255 -246 14.2577 0.252
sll5004 Forward -361 -352 13.8644 0.292
slr5005 Reverse -341 -350 13.8644 0.292
sll5032 Reverse -131 -140 14.2577 0.252
sll5086 Reverse -336 -345 14.2577 0.252
slr5087 Forward -283 -274 14.2577 0.252
slr7025 Reverse -149 -158 14.8477 0.252
slr7101 Forward -199 -190 14.2577 0.252
sll7103 Forward -338 -329 14.2577 0.252
slr7105 Reverse -164 -173 14.2577 0.252
slr8030 Reverse -31 -40 14.2577 0.252
sll8042 Reverse -164 -173 14.2577 0.252
slr8044 Forward -265 -256 14.2577 0.252
slr8045 Reverse -359 -368 13.8644 0.292
slr8046 Reverse -164 -173 14.2577 0.252
slr6001 Reverse -77 -86 14.8477 0.252
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.583  0.333  0.083  
0.083 0.000 0.000 0.917
0.167 0.000 0.000 0.833
0.000 0.000 0.167 0.833
0.083 0.167 0.083 0.667
0.083 0.000 0.000 0.917
0.000 0.000 0.000 1.000
0.000 0.083 0.000 0.917
0.167 0.000 0.000 0.833
0.000 0.000 1.000 0.000