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Details for NP_442544.1_6

Name NP_442544.1_6
Length 20
Regular expression T[TG]AT[GC][AC][CA]GGCG[TA]T[TC]GT[GC]ATT
Central No

Motif logo

Genes containing this motif

147 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1493 Reverse -354 -373 1.76941 0.111
sll1401 Forward -284 -265 -5.40875 0.298
sll1400 Forward -48 -29 -6.78538 0.298
sll0716 Reverse -285 -304 -8.35868 0.298
slr1006 Reverse -366 -385 -8.35868 0.298
slr0739 Forward -265 -246 -4.52377 0.244
slr0240 Forward -188 -169 -6.29373 0.298
slr0242 Forward -290 -271 -7.27704 0.298
ssl2009 Forward -100 -81 -6.78538 0.298
slr1784 Forward -34 -15 -7.37537 0.298
slr1798 Reverse -229 -248 -4.32711 0.234
slr1290 Forward -55 -36 1.17943 0.111
sll1198 Forward -69 -50 11.8975 0.0884
slr1300 Reverse -23 -42 -3.14714 0.141
sll1185 Forward -317 -298 20.1573 0.00823
sll1184 Forward -238 -219 -8.26035 0.298
sll0927 Reverse -293 -312 -7.08038 0.298
slr1068 Reverse -312 -331 -4.42544 0.243
sll1009 Reverse -347 -366 -7.17871 0.298
slr1055 Forward -141 -122 -7.17871 0.298
sll1638 Reverse -372 -391 -5.9004 0.298
slr1849 Forward -395 -376 -7.08038 0.298
sll0997 Reverse -262 -281 -7.57203 0.298
sll0994 Forward -317 -298 -6.68705 0.298
slr1391 Forward -286 -267 -5.99873 0.298
slr2007 Forward -118 -99 -4.81876 0.26
slr2009 Forward -171 -152 -5.11376 0.287
slr2012 Forward -253 -234 -8.55534 0.298
slr2012 Forward -79 -60 -9.14533 0.298
slr1140 Forward -284 -265 -8.35868 0.298
sll1968 Forward -346 -327 -7.86702 0.298
slr1535 Reverse -284 -303 -7.67036 0.298
slr1549 Forward -167 -148 -7.76869 0.298
ssl3177 Reverse -374 -393 -6.88371 0.298
slr1220 Forward -25 -6 -7.08038 0.298
slr1365 Forward -225 -206 -7.27704 0.298
sll0875 Forward -85 -66 2.65439 0.111
slr0876 Reverse -104 -123 2.65439 0.111
slr0889 Forward -229 -210 -4.72043 0.253
sll1308 Reverse -149 -168 -5.31042 0.297
slr1406 Forward -243 -224 -5.31042 0.297
sll1307 Reverse -243 -262 -7.17871 0.298
slr1862 Forward -285 -266 -8.16202 0.298
slr1866 Forward -255 -236 -6.1954 0.298
slr1874 Forward -197 -178 3.44104 0.105
sll1763 Reverse -167 -186 -4.32711 0.234
slr2132 Forward -229 -210 6.58763 0.0884
slr1742 Reverse -301 -320 2.3594 0.111
slr1747 Reverse -122 -141 -6.78538 0.298
sll0856 Reverse -360 -379 3.83436 0.0907
slr0869 Reverse -326 -345 -7.4737 0.298
sll1164 Reverse -102 -121 -5.99873 0.298
ssr2078 Forward -118 -99 -5.99873 0.298
sll1949 Reverse -143 -162 -5.80207 0.298
slr2067 Forward -204 -185 -5.80207 0.298
sll0248 Forward -144 -125 -8.06369 0.298
slr2082 Reverse -111 -130 10.5209 0.0884
slr2099 Reverse -364 -383 -8.35868 0.298
slr2101 Reverse -106 -125 -5.11376 0.287
slr1510 Forward -249 -230 -4.32711 0.234
slr1518 Forward -273 -254 -4.6221 0.25
slr1519 Forward -192 -173 -4.42544 0.243
slr0810 Reverse -127 -146 -3.04881 0.141
ssl3580 Forward -222 -203 2.75272 0.111
sll1880 Forward -275 -256 -8.16202 0.298
slr1283 Reverse -296 -315 -5.01543 0.279
sll1439 Reverse -311 -330 -6.39206 0.298
slr1531 Forward -149 -130 -6.39206 0.298
sll1086 Reverse -125 -144 -4.52377 0.244
slr1173 Forward -97 -78 -4.52377 0.244
sll1558 Forward -40 -21 -4.22878 0.234
sll1540 Forward -36 -17 -5.31042 0.297
slr1622 Reverse -3 -22 -5.31042 0.297
sll1527 Reverse -151 -170 -8.06369 0.298
ssr2754 Forward -223 -204 4.03102 0.0884
ssr2754 Forward -259 -240 -3.3438 0.151
slr0162 Forward -333 -314 -7.17871 0.298
slr0322 Forward -158 -139 -7.86702 0.298
sll0295 Forward -137 -118 -5.70374 0.298
slr0335 Reverse -154 -173 -5.70374 0.298
sll0336 Forward -34 -15 2.26107 0.111
sll0327 Forward -240 -221 2.94938 0.111
slr0386 Reverse -76 -95 2.94938 0.111
slr0388 Forward -92 -73 1.17943 0.111
slr0771 Reverse -93 -112 -6.49039 0.298
sll0755 Forward -84 -65 -9.24366 0.298
sll0752 Reverse -90 -109 -5.80207 0.298
sll0006 Reverse -172 -191 -6.98204 0.298
sll0199 Forward -315 -296 4.12936 0.0884
slr0226 Reverse -111 -130 4.12936 0.0884
sll0194 Reverse -73 -92 2.3594 0.111
slr0229 Forward -320 -301 2.3594 0.111
ssl0788 Forward -32 -13 -7.86702 0.298
slr0070 Reverse -242 -261 0.392778 0.111
slr0496 Reverse -127 -146 -9.14533 0.298
sll0398 Forward -254 -235 -4.32711 0.234
sll0480 Forward -33 -14 -4.91709 0.265
slr0509 Reverse -150 -169 -4.91709 0.265
slr0514 Forward -260 -241 -5.50708 0.298
sll0473 Reverse -169 -188 -5.70374 0.298
slr0517 Forward -145 -126 -5.80207 0.298
sll0595 Forward -113 -94 4.03102 0.0884
sll0594 Reverse -24 -43 -6.78538 0.298
slr0616 Forward -193 -174 1.86774 0.111
ssr1038 Forward -290 -271 28.9088 0.000361
sll0100 Forward -298 -279 -5.80207 0.298
sll0283 Reverse -259 -278 -5.9004 0.298
slr0309 Forward -231 -212 -5.9004 0.298
sll0792 Forward -155 -136 -3.54046 0.165
slr0530 Forward -332 -313 -4.32711 0.234
slr0530 Forward -110 -91 -4.72043 0.253
slr0531 Forward -202 -183 -6.98204 0.298
slr1457 Reverse -102 -121 -5.70374 0.298
sll1485 Forward -269 -250 -7.17871 0.298
sll1484 Forward -131 -112 -7.57203 0.298
sll1483 Forward -367 -348 -4.6221 0.25
sll1477 Reverse -330 -349 -6.68705 0.298
slr1583 Forward -308 -289 -6.68705 0.298
sll0729 Reverse -232 -251 -7.76869 0.298
ssr1258 Forward -208 -189 -4.72043 0.253
sll0446 Forward -151 -132 -4.72043 0.253
sll0446 Reverse -188 -207 -8.35868 0.298
slr1188 Reverse -127 -146 -5.99873 0.298
sll0563 Reverse -246 -265 -6.09707 0.298
slr0609 Reverse -334 -353 1.47442 0.111
slr0610 Reverse -197 -216 -5.99873 0.298
sll5032 Forward -228 -209 3.93269 0.0886
sll5123 Reverse -104 -123 -7.08038 0.298
slr5124 Forward -31 -12 -7.08038 0.298
sll5128 Forward -141 -122 -5.21209 0.296
ssr7018 Forward -383 -364 4.03102 0.0884
ssr7018 Forward -310 -291 4.03102 0.0884
ssr7018 Forward -238 -219 4.03102 0.0884
ssr7018 Forward -166 -147 4.03102 0.0884
ssr7018 Forward -94 -75 4.03102 0.0884
ssr7018 Forward -25 -6 4.03102 0.0884
ssl7019 Reverse -335 -354 4.03102 0.0884
ssl7019 Reverse -261 -280 4.03102 0.0884
ssl7019 Reverse -183 -202 4.03102 0.0884
ssl7019 Reverse -109 -128 4.03102 0.0884
ssl7019 Reverse -35 -54 4.03102 0.0884
ssl7020 Reverse -336 -355 4.03102 0.0884
ssl7020 Reverse -262 -281 4.03102 0.0884
ssl7020 Reverse -189 -208 4.03102 0.0884
ssl7020 Reverse -119 -138 4.03102 0.0884
ssl7020 Reverse -46 -65 4.03102 0.0884
ssl7021 Reverse -98 -117 4.03102 0.0884
ssl7021 Reverse -30 -49 4.03102 0.0884
slr7023 Forward -389 -370 4.03102 0.0884
slr7032 Forward -154 -135 -6.49039 0.298
slr7073 Reverse -329 -348 -3.14714 0.141
slr7081 Forward -167 -148 -9.14533 0.298
slr7096 Forward -338 -319 -8.45701 0.298
slr8023 Reverse -43 -62 -6.98204 0.298
ssl8024 Forward -210 -191 -6.1954 0.298
sll8025 Reverse -69 -88 -7.08038 0.298
slr8026 Forward -67 -48 -7.08038 0.298
slr6042 Forward -182 -163 -8.35868 0.298
slr6050 Forward -143 -124 -8.26035 0.298
slr6095 Forward -178 -159 -4.81876 0.26
6803t03 Reverse -60 -79 -4.32711 0.234
6803t04 Forward -207 -188 -7.08038 0.298
6803t13 Reverse -31 -50 -5.60541 0.298
6803t18 Forward -187 -168 -6.78538 0.298
6803t31 Forward -232 -213 -5.60541 0.298
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.000 0.000 0.333 0.667
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.333 0.667 0.000
0.667 0.333 0.000 0.000
0.333 0.667 0.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.333 0.000 0.000 0.667
0.000 0.000 0.000 1.000
0.000 0.333 0.000 0.667
0.000 0.000 1.000 0.000
0.000 0.000 0.000 1.000
0.000 0.333 0.667 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000