Your browser is old and dusty. Try Google Chrome!

Details for NP_442508.1_8

Name NP_442508.1_8
Length 18
Regular expression T[CT][CG][CG][CTG][TAG][TAC][TAG][GC]GGGT[GT]GGGA
Central No

Motif logo

Genes containing this motif

183 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1399 Reverse -91 -108 9.87194 0.277
sll1398 Forward -315 -298 12.1336 0.256
slr1495 Forward -287 -270 9.87194 0.277
sll1064 Reverse -274 -291 11.8386 0.256
sll1060 Reverse -230 -247 10.2653 0.272
ssl2069 Reverse -43 -60 10.2653 0.272
ssr1853 Forward -226 -209 10.2653 0.272
sll1045 Reverse -147 -164 8.7903 0.297
sll0716 Forward -272 -255 16.1651 0.223
slr0728 Reverse -232 -249 11.1502 0.256
sll0704 Forward -77 -60 18.0334 0.172
slr0732 Reverse -99 -116 18.0334 0.172
sll0702 Reverse -332 -349 9.18362 0.292
sll0228 Reverse -366 -383 8.88863 0.297
sll1324 Reverse -146 -163 9.87194 0.277
sll1321 Forward -381 -364 9.08529 0.292
slr1100 Forward -333 -316 9.47861 0.289
slr1102 Forward -171 -154 13.7068 0.256
slr1776 Reverse -220 -237 12.8219 0.256
slr1796 Forward -168 -151 11.6419 0.256
slr1800 Reverse -17 -34 10.2653 0.272
slr1305 Forward -292 -275 11.7402 0.256
sll1184 Forward -279 -262 11.1502 0.256
slr0967 Reverse -74 -91 12.4285 0.256
sll0938 Forward -92 -75 20.0984 0.157
sll0928 Forward -260 -243 11.9369 0.256
sll1024 Reverse -336 -353 14.7885 0.256
sll1018 Forward -154 -137 8.88863 0.297
slr0692 Forward -336 -319 8.7903 0.297
ssr1736 Forward -398 -381 9.47861 0.289
sll1002 Reverse -37 -54 16.1651 0.223
sll1002 Reverse -100 -117 9.08529 0.292
sll1640 Forward -318 -301 10.2653 0.272
smr0008 Reverse -119 -136 11.4452 0.256
slr2035 Reverse -323 -340 11.4452 0.256
sll1934 Reverse -310 -327 12.8219 0.256
sll1931 Reverse -202 -219 9.08529 0.292
slr1022 Reverse -315 -332 10.2653 0.272
slr1025 Forward -282 -265 14.7885 0.256
slr1025 Reverse -175 -192 10.2653 0.272
sll0985 Reverse -189 -206 11.7402 0.256
slr1037 Forward -241 -224 11.7402 0.256
slr1039 Forward -57 -40 15.4768 0.243
slr1699 Reverse -137 -154 9.38028 0.292
ssr2848 Forward -350 -333 11.1502 0.256
slr1704 Forward -25 -8 11.3469 0.256
sll1927 Forward -297 -280 12.9202 0.256
slr2005 Reverse -310 -327 12.9202 0.256
slr2005 Reverse -99 -116 11.2486 0.256
sll1077 Forward -172 -155 9.18362 0.292
slr1142 Reverse -265 -282 9.18362 0.292
sll1070 Reverse -236 -253 8.88863 0.297
sll1818 Forward -235 -218 8.98696 0.297
slr1200 Reverse -279 -296 10.7569 0.267
slr1206 Reverse -58 -75 10.1669 0.276
ssl3335 Forward -360 -343 11.1502 0.256
sll1633 Reverse -275 -292 10.9536 0.264
sll1633 Reverse -274 -291 10.8552 0.266
slr1236 Forward -36 -19 16.4601 0.223
slr1443 Reverse -241 -258 9.47861 0.289
slr1366 Forward -212 -195 9.18362 0.292
sll1267 Reverse -329 -346 12.6252 0.256
slr0878 Reverse -5 -22 11.0519 0.259
sll0868 Forward -112 -95 13.2152 0.256
sll0867 Forward -28 -11 9.97027 0.277
slr0886 Reverse -90 -107 9.97027 0.277
slr1853 Forward -368 -351 16.3618 0.223
slr1856 Reverse -48 -65 12.6252 0.256
sll1773 Forward -316 -299 15.5751 0.243
sll1768 Reverse -126 -143 10.3636 0.272
slr1887 Forward -141 -124 12.4285 0.256
sll1709 Reverse -178 -195 12.0352 0.256
sll1708 Reverse -339 -356 13.9035 0.256
sll1630 Reverse -68 -85 9.47861 0.289
sll1620 Reverse -54 -71 9.97027 0.277
slr1739 Forward -352 -335 10.1669 0.276
slr1739 Forward -200 -183 9.97027 0.277
slr1742 Forward -196 -179 11.1502 0.256
sll0855 Reverse -101 -118 10.6586 0.267
sll0846 Forward -377 -360 8.7903 0.297
slr0865 Forward -41 -24 9.57695 0.289
sll0238 Reverse -208 -225 14.4935 0.256
slr2095 Forward -381 -364 8.7903 0.297
ssl2789 Forward -376 -359 11.3469 0.256
slr1513 Reverse -180 -197 8.88863 0.297
slr1516 Reverse -75 -92 10.4619 0.272
sll1237 Forward -381 -364 12.9202 0.256
sll1222 Forward -155 -138 12.0352 0.256
sml0008 Reverse -373 -390 12.7235 0.256
slr0807 Forward -392 -375 12.7235 0.256
slr0808 Forward -291 -274 9.47861 0.289
sll1263 Forward -396 -379 9.47861 0.289
slr1964 Reverse -133 -150 9.87194 0.277
sll1886 Forward -98 -81 12.8219 0.256
sll1878 Reverse -222 -239 11.5436 0.256
sll1872 Forward -160 -143 16.8534 0.223
sll1390 Reverse -71 -88 11.9369 0.256
sll1386 Forward -65 -48 9.08529 0.292
slr1467 Reverse -25 -42 9.08529 0.292
slr1270 Forward -338 -321 9.38028 0.292
slr1271 Forward -367 -350 9.28195 0.292
sll1098 Forward -188 -171 10.5603 0.272
slr1170 Reverse -365 -382 10.4619 0.272
slr1677 Forward -348 -331 10.4619 0.272
sll0909 Reverse -245 -262 11.2486 0.256
slr0954 Reverse -193 -210 14.5918 0.256
slr0958 Forward -75 -58 8.7903 0.297
ssr2754 Forward -370 -353 17.1484 0.223
ssr2754 Forward -106 -89 13.3135 0.256
sll0422 Forward -303 -286 9.28195 0.292
sll0257 Forward -225 -208 12.8219 0.256
sll0361 Reverse -191 -208 10.8552 0.266
sll0361 Reverse -114 -131 9.08529 0.292
ssl0707 Forward -288 -271 11.5436 0.256
slr0404 Reverse -15 -32 11.5436 0.256
slr1935 Forward -102 -85 12.8219 0.256
sll1853 Forward -100 -83 11.7402 0.256
slr1946 Reverse -382 -399 9.28195 0.292
sll0944 Reverse -373 -390 10.7569 0.267
slr0337 Reverse -375 -392 12.7235 0.256
sll0177 Reverse -321 -338 10.1669 0.276
slr0370 Forward -324 -307 11.4452 0.256
slr0379 Forward -284 -267 8.88863 0.297
sll0327 Forward -228 -211 11.1502 0.256
slr0386 Reverse -88 -105 11.1502 0.256
sll0766 Forward -83 -66 13.4119 0.256
slr0344 Forward -242 -225 12.0352 0.256
slr0347 Reverse -270 -287 11.5436 0.256
sll0319 Forward -73 -56 12.1336 0.256
slr0348 Reverse -204 -221 12.1336 0.256
sll0018 Reverse -338 -355 8.88863 0.297
slr0220 Forward -303 -286 8.98696 0.297
sll0198 Forward -324 -307 11.1502 0.256
sll0412 Forward -22 -5 15.5751 0.243
slr0436 Forward -81 -64 10.5603 0.272
sll0400 Reverse -121 -138 10.2653 0.272
slr0064 Forward -82 -65 9.18362 0.292
slr0467 Forward -93 -76 11.0519 0.259
sml0002 Reverse -163 -180 11.2486 0.256
slr0487 Forward -266 -249 12.8219 0.256
sll0682 Forward -310 -293 9.87194 0.277
slr0650 Reverse -315 -332 9.38028 0.292
sll0385 Forward -287 -270 9.18362 0.292
sll0189 Reverse -121 -138 11.7402 0.256
slr0194 Forward -397 -380 9.67528 0.289
sll0183 Forward -80 -63 13.7068 0.256
ssl0352 Reverse -114 -131 9.18362 0.292
sll0178 Reverse -273 -290 9.08529 0.292
slr0900 Forward -246 -229 9.47861 0.289
ssr1528 Forward -318 -301 9.87194 0.277
sll0539 Forward -321 -304 12.2319 0.256
slr0090 Reverse -261 -278 9.77361 0.285
sll0473 Forward -371 -354 18.6234 0.172
slr0518 Reverse -350 -367 18.6234 0.172
sll0469 Reverse -223 -240 13.3135 0.256
sll0039 Forward -78 -61 12.1336 0.256
sll0030 Reverse -381 -398 11.8386 0.256
slr0040 Forward -375 -358 9.67528 0.289
slr0044 Reverse -84 -101 16.0668 0.223
slr0527 Forward -141 -124 8.7903 0.297
slr0528 Forward -294 -277 9.38028 0.292
sll0505 Reverse -359 -376 18.0334 0.172
sll0505 Reverse -20 -37 10.2653 0.272
slr0543 Reverse -298 -315 9.47861 0.289
slr0926 Forward -226 -209 12.0352 0.256
sll0535 Reverse -243 -260 8.7903 0.297
slr1451 Forward -185 -168 9.87194 0.277
sll0629 Forward -103 -86 11.8386 0.256
slr0654 Forward -79 -62 11.7402 0.256
slr0657 Reverse -8 -25 11.8386 0.256
slr1560 Reverse -284 -301 9.08529 0.292
sll1485 Reverse -9 -26 9.97027 0.277
sll1485 Reverse -280 -297 8.7903 0.297
slr0757 Reverse -192 -209 13.3135 0.256
slr1656 Forward -27 -10 12.5269 0.256
ssr2781 Reverse -130 -147 13.1169 0.256
sll0451 Forward -64 -47 10.9536 0.264
sll0436 Reverse -272 -289 9.57695 0.289
slr5088 Forward -188 -171 9.97027 0.277
ssr5121 Forward -133 -116 20.1967 0.157
ssr5121 Reverse -245 -262 16.1651 0.223
slr7010 Forward -122 -105 9.97027 0.277
ssl7038 Forward -176 -159 9.47861 0.289
ssl7039 Forward -386 -369 10.8552 0.266
ssr7040 Reverse -243 -260 9.47861 0.289
sll8011 Forward -235 -218 13.2152 0.256
ssr8013 Reverse -283 -300 13.2152 0.256
ssl6018 Forward -134 -117 10.6586 0.267
ssr6020 Reverse -289 -306 10.6586 0.267
ssl6077 Forward -134 -117 10.6586 0.267
ssr6079 Reverse -289 -306 10.6586 0.267
6803t09 Forward -176 -159 11.1502 0.256
6803t41 Forward -139 -122 11.8386 0.256
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.111  0.000  0.889  
0.111 0.667 0.000 0.222
0.000 0.556 0.444 0.000
0.111 0.556 0.333 0.000
0.000 0.444 0.222 0.333
0.333 0.000 0.222 0.444
0.222 0.222 0.111 0.444
0.333 0.000 0.222 0.444
0.000 0.333 0.556 0.111
0.000 0.111 0.889 0.000
0.000 0.000 0.889 0.111
0.000 0.000 0.889 0.111
0.000 0.111 0.000 0.889
0.111 0.000 0.667 0.222
0.111 0.000 0.889 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.889 0.000 0.000 0.111