Your browser is old and dusty. Try Google Chrome!

Details for NP_442452.1_3

Name NP_442452.1_3
Length 20
Regular expression [GT]T[GT]GC[CA]GCCA[GA][GA][AG][TA][GA]ATGGG
Central Yes

Motif logo

Genes containing this motif

192 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll0558 Reverse -73 -92 4.12936 0.259
sll1398 Forward -304 -285 1.0811 0.282
sll1043 Reverse -85 -104 4.62101 0.259
sll0708 Forward -398 -379 0.0977854 0.298
slr0741 Forward -216 -197 7.17762 0.212
slr0240 Reverse -204 -223 3.14605 0.267
slr0241 Reverse -184 -203 3.14605 0.267
slr0242 Reverse -378 -397 5.30933 0.253
slr1411 Forward -395 -376 1.76941 0.282
slr1097 Forward -188 -169 2.26107 0.281
sll1035 Reverse -52 -71 -0.000545616 0.298
slr1106 Forward -183 -164 -0.000545616 0.298
sll1031 Forward -163 -144 1.86774 0.282
slr1110 Reverse -213 -232 2.3594 0.281
sll1682 Reverse -375 -394 5.70265 0.229
slr1793 Reverse -339 -358 -0.000545616 0.298
sll1660 Forward -389 -370 2.75272 0.27
sll1656 Forward -245 -226 6.19431 0.222
sll1655 Forward -153 -134 1.86774 0.282
ssl1784 Reverse -334 -353 4.71934 0.259
slr0982 Reverse -296 -315 3.24438 0.267
slr1084 Reverse -88 -107 0.196116 0.298
slr1087 Forward -107 -88 1.47442 0.282
sll1025 Reverse -344 -363 4.03102 0.259
ssl1972 Reverse -63 -82 4.03102 0.259
slr0688 Forward -134 -115 0.294447 0.298
slr1590 Forward -396 -377 0.687771 0.282
slr1046 Forward -378 -359 1.76941 0.282
ssl1923 Forward -233 -214 3.73603 0.261
sll1749 Forward -357 -338 4.32602 0.259
sll1749a Forward -52 -33 4.32602 0.259
sll1940 Reverse -45 -64 0.786102 0.282
slr1910 Forward -198 -179 7.27595 0.212
slr1910 Forward -213 -194 2.16274 0.281
sll0998 Reverse -160 -179 4.42435 0.259
sll0990 Forward -288 -269 2.16274 0.281
slr1028 Reverse -344 -363 2.16274 0.281
slr1035 Reverse -249 -268 1.96607 0.282
slr1039 Forward -175 -156 0.196116 0.298
slr1379 Forward -237 -218 -0.000545616 0.298
sll1581 Forward -223 -204 6.4893 0.218
slr1702 Reverse -254 -273 6.4893 0.218
slr2007 Forward -71 -52 7.96426 0.212
sll1081 Forward -219 -200 18.9773 0.0676
sll1078 Forward -201 -182 0.687771 0.282
sll1076 Forward -166 -147 0.491109 0.29
slr1148 Forward -351 -332 13.8641 0.0972
slr1150 Reverse -364 -383 1.96607 0.282
sll1817 Forward -84 -65 6.39097 0.218
sll1119 Reverse -285 -304 7.96426 0.212
sll1119 Reverse -263 -282 1.0811 0.282
slr1202 Reverse -66 -85 0.687771 0.282
slr1206 Forward -59 -40 0.392778 0.294
sll1725 Forward -89 -70 6.78429 0.218
sll1717 Forward -279 -260 1.17943 0.282
sll1712 Reverse -277 -296 6.98095 0.214
sll1469 Reverse -25 -44 3.73603 0.261
slr1535 Forward -143 -124 3.73603 0.261
sll1634 Reverse -280 -299 3.24438 0.267
sll1355 Forward -326 -307 4.71934 0.259
sll1275 Reverse -297 -316 6.09597 0.224
slr1363 Forward -215 -196 0.491109 0.29
sll0875 Forward -256 -237 1.0811 0.282
slr0890 Forward -142 -123 8.75091 0.212
slr1860 Forward -234 -215 7.17762 0.212
slr1860 Forward -192 -173 3.34271 0.267
sll1761 Reverse -95 -114 3.14605 0.267
slr1882 Forward -349 -330 2.55606 0.277
sll2013 Reverse -269 -288 0.0977854 0.298
sll2011 Forward -360 -341 13.8641 0.0972
sll2008 Forward -74 -55 8.16093 0.212
slr2135 Reverse -91 -110 8.16093 0.212
sll1704 Forward -335 -316 3.73603 0.261
sll1702 Forward -135 -116 2.55606 0.277
sll0847 Reverse -362 -381 6.4893 0.218
sll0847 Reverse -89 -108 0.491109 0.29
slr1245 Forward -167 -148 9.3409 0.212
sll1154 Reverse -86 -105 0.786102 0.282
slr1263 Forward -158 -139 1.0811 0.282
sll1954 Reverse -358 -377 1.17943 0.282
ssl3692 Reverse -23 -42 1.17943 0.282
slr2062 Forward -71 -52 1.17943 0.282
ssr3383 Forward -269 -250 8.35759 0.212
slr1991 Reverse -93 -112 0.786102 0.282
sll1615 Forward -365 -346 0.687771 0.282
slr1720 Forward -327 -308 3.73603 0.261
sll1601 Reverse -112 -131 3.53937 0.267
slr1730 Reverse -344 -363 8.84924 0.212
slr0269 Reverse -272 -291 2.55606 0.277
slr2103 Forward -190 -171 1.67108 0.282
slr1511 Reverse -324 -343 4.22769 0.259
slr1522 Reverse -241 -260 7.17762 0.212
ssr3571 Forward -190 -171 16.8141 0.0828
slr2107 Forward -23 -4 1.57275 0.282
slr1330 Reverse -48 -67 0.687771 0.282
slr0806 Reverse -325 -344 1.47442 0.282
sll0818 Reverse -136 -155 5.70265 0.229
sll0804 Reverse -45 -64 8.94757 0.212
sll0803 Reverse -59 -78 8.94757 0.212
sll1252 Forward -296 -277 3.24438 0.267
slr1350 Forward -355 -336 2.94938 0.27
sll1244 Reverse -356 -375 0.786102 0.282
slr1964 Reverse -179 -198 7.37428 0.212
sll1869 Reverse -41 -60 0.0977854 0.298
slr1984 Forward -109 -90 0.0977854 0.298
sll1383 Reverse -32 -51 4.03102 0.259
sll1382 Reverse -78 -97 4.52268 0.259
slr1474 Forward -353 -334 4.52268 0.259
sll1378 Reverse -212 -231 4.62101 0.259
sll1369 Forward -104 -85 1.76941 0.282
slr1278 Forward -307 -288 6.39097 0.218
slr1159 Forward -267 -248 9.93088 0.212
slr1170 Reverse -346 -365 4.916 0.259
ssr2806 Forward -147 -128 7.07928 0.213
sll1557 Reverse -295 -314 2.75272 0.27
slr0948 Forward -196 -177 0.786102 0.282
slr0953 Forward -277 -258 6.4893 0.218
sll1540 Forward -361 -342 1.86774 0.282
sll1532 Reverse -243 -262 11.5042 0.163
slr1635 Forward -124 -105 11.5042 0.163
sll1527 Reverse -270 -289 2.3594 0.281
slr1645 Reverse -221 -240 0.884433 0.282
ssr2754 Forward -269 -250 3.04771 0.267
sll1522 Forward -372 -353 7.57094 0.212
sll1521 Reverse -239 -258 3.34271 0.267
sll0424 Reverse -60 -79 0.58944 0.288
sll0270 Reverse -371 -390 1.0811 0.282
slr0288 Forward -110 -91 6.19431 0.222
sll0146 Forward -117 -98 4.12936 0.259
sll0142 Reverse -360 -379 11.2092 0.163
sll1862 Forward -221 -202 0.884433 0.282
sll1861 Forward -274 -255 1.17943 0.282
slr1942 Forward -282 -263 5.80098 0.229
ssl0312 Reverse -149 -168 1.57275 0.282
slr0361 Reverse -261 -280 4.62101 0.259
slr0374 Forward -243 -224 0.786102 0.282
slr0387 Reverse -141 -160 5.01433 0.259
slr1003 Reverse -380 -399 3.14605 0.267
sll0320 Forward -138 -119 0.196116 0.298
slr0351 Forward -360 -341 1.17943 0.282
slr0354 Forward -310 -291 0.884433 0.282
sll0209 Forward -359 -340 3.04771 0.267
slr0222 Reverse -343 -362 2.26107 0.281
sll0070 Reverse -361 -380 2.26107 0.281
slr0054 Forward -375 -356 2.3594 0.281
slr0069 Forward -369 -350 1.76941 0.282
slr0487 Forward -345 -326 3.04771 0.267
sll0683 Forward -52 -33 4.03102 0.259
ssr0332 Reverse -176 -195 1.47442 0.282
slr0906 Reverse -325 -344 15.8307 0.0828
sll0541 Reverse -303 -322 11.0125 0.163
ssl1552 Reverse -285 -304 0.392778 0.294
sll0829 Forward -239 -220 22.0256 0.0396
sll0489 Forward -61 -42 4.81767 0.259
slr0500 Reverse -226 -245 4.81767 0.259
sll0479 Reverse -133 -152 0.687771 0.282
sll0597 Reverse -225 -244 9.24257 0.212
sll0587 Forward -72 -53 7.66927 0.212
slr0626 Forward -388 -369 5.99764 0.226
sll0678 Forward -248 -229 1.17943 0.282
smr0002 Forward -287 -268 1.17943 0.282
sll0667 Forward -271 -252 3.73603 0.261
sll0044 Reverse -123 -142 0.294447 0.298
slr0036 Forward -161 -142 1.47442 0.282
sll0034 Reverse -251 -270 0.786102 0.282
sll0033 Reverse -71 -90 7.57094 0.212
sll0897 Reverse -364 -383 8.84924 0.212
sll0895 Reverse -167 -186 2.85105 0.27
slr0546 Forward -266 -247 2.85105 0.27
sll0536 Forward -384 -365 0.687771 0.282
sll0535 Forward -343 -324 0.0977854 0.298
slr0556 Reverse -343 -362 5.89931 0.229
sll1338 Reverse -212 -231 1.27776 0.282
slr0658 Reverse -226 -245 4.52268 0.259
slr1563 Forward -326 -307 15.4374 0.0828
slr1565 Forward -230 -211 4.03102 0.259
slr0749 Reverse -358 -377 1.47442 0.282
slr0597 Forward -46 -27 16.0274 0.0828
slr0597 Reverse -84 -103 2.75272 0.27
slr0601 Forward -314 -295 3.24438 0.267
sll5081 Forward -228 -209 1.47442 0.282
slr5082 Reverse -262 -281 1.47442 0.282
sll7050 Reverse -124 -143 14.9458 0.0828
slr7052 Forward -227 -208 14.9458 0.0828
sll7055 Forward -22 -3 2.75272 0.27
sll7062 Forward -89 -70 1.86774 0.282
slr7095 Reverse -61 -80 0.0977854 0.298
ssl8003 Reverse -166 -185 1.27776 0.282
slr6029 Reverse -323 -342 1.27776 0.282
slr6088 Reverse -323 -342 1.27776 0.282
6803t05 Forward -143 -124 11.0125 0.163
6803t08 Forward -187 -168 2.16274 0.281
6803t13 Forward -381 -362 1.27776 0.282
6803t22 Reverse -270 -289 -0.000545616 0.298
6803t28 Reverse -202 -221 3.14605 0.267
6803t29 Reverse -108 -127 7.86593 0.212
6803t40 Reverse -108 -127 7.86593 0.212
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.750  0.250  
0.000 0.000 0.000 1.000
0.000 0.083 0.500 0.417
0.000 0.000 1.000 0.000
0.000 0.833 0.000 0.167
0.333 0.500 0.000 0.167
0.167 0.000 0.833 0.000
0.083 0.917 0.000 0.000
0.000 0.917 0.000 0.083
0.917 0.083 0.000 0.000
0.417 0.000 0.583 0.000
0.250 0.000 0.750 0.000
0.667 0.000 0.333 0.000
0.250 0.000 0.000 0.750
0.333 0.000 0.667 0.000
1.000 0.000 0.000 0.000
0.167 0.000 0.167 0.667
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.167 0.833 0.000