Your browser is old and dusty. Try Google Chrome!

Details for NP_442401.1_2

Name NP_442401.1_2
Length 20
Regular expression [CT][CG][GC]C[AG]AT[CA][GT][GT][CGT][CAT]CC[GCT]C[TG]GC[CA]
Central Yes

Motif logo

Genes containing this motif

222 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1406 Forward -98 -79 11.6017 0.163
sll1405 Forward -89 -70 6.78348 0.282
sll1060 Forward -361 -342 7.96345 0.254
ssl2069 Forward -174 -155 7.96345 0.254
ssr1853 Reverse -95 -114 7.96345 0.254
ssl1326 Forward -336 -317 12.585 0.159
slr0742 Forward -117 -98 10.815 0.171
slr0252 Reverse -221 -240 16.1249 0.0987
sll0222 Forward -150 -131 7.27514 0.269
slr0254 Reverse -371 -390 7.27514 0.269
sll1324 Reverse -178 -197 22.9097 0.0217
sll1035 Forward -292 -273 12.88 0.159
sll1027 Forward -36 -17 11.3067 0.163
slr1109 Reverse -243 -262 11.3067 0.163
sll1682 Forward -341 -322 7.76679 0.255
slr1787 Forward -175 -156 11.5033 0.163
slr1800 Forward -237 -218 6.88182 0.282
ssl2384 Reverse -361 -380 12.7816 0.159
sll1192 Reverse -293 -312 12.1917 0.159
ssr2153 Forward -342 -323 12.1917 0.159
ssr1604 Forward -120 -101 9.7334 0.201
ssr1604 Forward -338 -319 7.37347 0.266
slr0963 Forward -333 -314 12.585 0.159
slr0966 Reverse -314 -333 17.2065 0.0964
slr0969 Reverse -354 -373 12.0933 0.159
slr0971 Reverse -168 -187 6.98015 0.282
sll0922 Reverse -338 -357 8.25844 0.248
slr0977 Forward -396 -377 8.25844 0.248
slr1079 Forward -64 -45 10.1267 0.186
sll1023 Reverse -268 -287 11.3067 0.163
ssr1789 Reverse -278 -297 12.585 0.159
slr0670 Reverse -125 -144 11.7983 0.163
slr0677 Forward -275 -256 16.6165 0.0964
slr0678 Reverse -287 -306 12.3883 0.159
slr0688 Reverse -360 -379 10.9134 0.171
sll0638 Forward -382 -363 7.96345 0.254
ssl2923 Forward -274 -255 13.0766 0.159
ssl2922 Forward -46 -27 13.0766 0.159
slr1044 Reverse -157 -176 12.88 0.159
sml0005 Forward -290 -271 8.84842 0.226
smr0006 Forward -253 -234 12.0933 0.159
smr0007 Forward -397 -378 12.0933 0.159
ssr3409 Forward -279 -260 11.0117 0.171
sll1070 Forward -66 -47 13.175 0.159
sll1822 Forward -62 -43 8.4551 0.248
sll1818 Reverse -218 -237 11.5033 0.163
sll1813 Forward -183 -164 6.78348 0.282
sll1811 Forward -268 -249 8.84842 0.226
ssl3436 Forward -216 -197 6.78348 0.282
sll1801 Forward -291 -272 14.2566 0.125
sll1797 Forward -55 -36 9.43841 0.206
slr1895 Reverse -93 -112 9.43841 0.206
slr1899 Reverse -274 -293 11.5033 0.163
slr1196 Reverse -72 -91 7.57013 0.259
slr1209 Reverse -273 -292 11.0117 0.171
sll1725 Reverse -272 -291 10.9134 0.171
slr1535 Forward -342 -323 6.48849 0.299
sll1450 Forward -218 -199 7.76679 0.255
ssr2406 Reverse -376 -395 7.86512 0.255
slr1363 Forward -324 -305 9.63507 0.201
slr1366 Reverse -316 -335 9.14342 0.216
sll1268 Forward -369 -350 10.4217 0.178
sll0876 Reverse -41 -60 8.35677 0.248
sll0868 Forward -283 -264 8.84842 0.226
sll0867 Forward -277 -258 12.3883 0.159
sll1317 Reverse -355 -374 15.1416 0.109
slr1865 Reverse -241 -260 10.9134 0.171
slr1870 Forward -133 -114 6.58682 0.294
sll1765 Reverse -193 -212 13.3716 0.158
slr1888 Reverse -159 -178 7.76679 0.255
ssl3829 Reverse -286 -305 9.63507 0.201
ssl3829 Forward -39 -20 9.14342 0.216
slr2141 Forward -152 -133 9.63507 0.201
slr0853 Reverse -115 -134 7.07848 0.281
ssr2087 Forward -398 -379 8.75009 0.23
slr1993 Forward -164 -145 21.828 0.0262
slr1993 Forward -390 -371 7.66846 0.255
sll1905 Forward -99 -80 11.405 0.163
sll1905 Forward -114 -95 9.04509 0.219
slr1717 Forward -351 -332 17.1082 0.0964
sll1595 Reverse -152 -171 6.88182 0.282
slr1726 Forward -271 -252 6.88182 0.282
slr1731 Forward -186 -167 9.24175 0.211
sll0240 Reverse -58 -77 9.24175 0.211
ssr3532 Forward -377 -358 16.4199 0.0964
slr2103 Reverse -118 -137 11.405 0.163
sll1427 Forward -62 -43 6.98015 0.282
slr1520 Reverse -301 -320 12.1917 0.159
slr2124 Forward -389 -370 8.94676 0.223
ssr2194 Forward -300 -281 7.4718 0.262
sll1229 Reverse -113 -132 14.4533 0.12
sll1229 Reverse -111 -130 8.75009 0.23
sll1229 Forward -226 -207 6.88182 0.282
sll1226 Reverse -242 -261 8.75009 0.23
sll1217 Reverse -326 -345 9.93006 0.195
slr0804 Forward -342 -323 9.93006 0.195
slr0818 Reverse -308 -327 14.7483 0.114
sll0802 Reverse -125 -144 16.1249 0.0987
sll1258 Reverse -24 -43 9.24175 0.211
sll1250 Reverse -128 -147 9.7334 0.201
slr1957 Forward -284 -265 7.4718 0.262
sll1884 Reverse -110 -129 10.1267 0.186
sll1384 Forward -178 -159 8.06178 0.254
sll1377 Reverse -312 -331 9.7334 0.201
slr1276 Reverse -66 -85 8.35677 0.248
slr1533 Forward -225 -206 7.57013 0.259
slr1534 Forward -174 -155 11.5033 0.163
sll1099 Reverse -80 -99 7.96345 0.254
ssl2148 Reverse -324 -343 19.7631 0.0594
slr1171 Reverse -220 -239 10.52 0.178
sll1087 Forward -300 -281 10.4217 0.178
sll1087 Reverse -25 -44 10.4217 0.178
ssr1951 Forward -343 -324 8.55343 0.241
ssr2799 Forward -212 -193 6.98015 0.282
ssr2831 Reverse -116 -135 6.88182 0.282
slr1689 Reverse -375 -394 6.88182 0.282
sll1553 Reverse -42 -61 15.0432 0.109
slr1697 Forward -242 -223 15.0432 0.109
slr0936 Reverse -113 -132 9.53674 0.204
slr0948 Reverse -364 -383 9.24175 0.211
sll0909 Forward -324 -305 7.07848 0.281
ssr0761 Forward -112 -93 6.48849 0.299
sll0427 Reverse -235 -254 10.0284 0.191
sll0424 Reverse -165 -184 12.4867 0.159
sll0423 Reverse -123 -142 7.76679 0.255
sll0270 Reverse -334 -353 6.98015 0.282
sll0261 Reverse -184 -203 7.66846 0.255
slr0284 Forward -389 -370 20.2548 0.0594
slr0284 Forward -115 -96 7.66846 0.255
slr0401 Forward -352 -333 14.9449 0.11
slr0401 Reverse -374 -393 7.66846 0.255
slr0143 Forward -190 -171 7.76679 0.255
sll1864 Reverse -79 -98 8.06178 0.254
slr0322 Forward -152 -133 7.86512 0.255
sll0300 Forward -84 -65 16.8132 0.0964
sll0169 Reverse -369 -388 18.8781 0.0843
sll0166 Reverse -24 -43 6.78348 0.282
sll0157 Forward -123 -104 19.8614 0.0594
slr0184 Reverse -291 -310 8.55343 0.241
sll0154 Reverse -230 -249 7.37347 0.266
slr0379 Forward -114 -95 13.47 0.156
slr0388 Reverse -318 -337 7.57013 0.259
slr0769 Forward -214 -195 7.96345 0.254
slr0773 Reverse -180 -199 11.405 0.163
sll0772 Reverse -22 -41 9.04509 0.219
sll0763 Forward -375 -356 18.2882 0.0904
sll0762 Forward -59 -40 18.2882 0.0904
sll0757 Reverse -333 -352 6.78348 0.282
slr0780 Forward -187 -168 6.78348 0.282
slr0347 Forward -220 -201 22.3197 0.0238
slr0357 Forward -253 -234 6.98015 0.282
sll0208 Forward -387 -368 7.27514 0.269
sll0204 Reverse -258 -277 14.4533 0.12
slr0232 Forward -74 -55 15.0432 0.109
slr0436 Forward -36 -17 12.3883 0.159
slr0436 Reverse -346 -365 6.58682 0.294
slr0049 Reverse -51 -70 9.7334 0.201
ssr0102 Forward -110 -91 11.3067 0.163
slr0050 Forward -400 -381 11.3067 0.163
slr0468 Reverse -212 -231 9.04509 0.219
slr0491 Forward -365 -346 11.995 0.162
slr0493 Reverse -84 -103 10.3234 0.178
sll0681 Reverse -45 -64 10.3234 0.178
slr0634 Reverse -55 -74 9.53674 0.204
slr0635 Reverse -347 -366 7.86512 0.255
slr0637 Reverse -337 -356 8.25844 0.248
slr0418 Reverse -68 -87 10.7167 0.171
sll0385 Reverse -359 -378 11.8967 0.163
sll0377 Reverse -279 -298 10.1267 0.186
sll0189 Forward -238 -219 10.9134 0.171
sll0189 Forward -247 -228 6.48849 0.299
ssl0353 Forward -178 -159 12.1917 0.159
ssl0352 Forward -282 -263 6.58682 0.294
ssl1690 Forward -208 -189 16.5182 0.0964
slr0921 Reverse -175 -194 16.5182 0.0964
sgl0001 Reverse -337 -356 6.58682 0.294
ssl1552 Forward -170 -151 9.53674 0.204
slr0072 Forward -47 -28 15.4366 0.109
slr0076 Reverse -75 -94 10.3234 0.178
slr0079 Forward -281 -262 8.94676 0.223
slr0093 Reverse -303 -322 12.585 0.159
sll0487 Forward -34 -15 14.1583 0.126
sll0478 Reverse -174 -193 8.25844 0.248
sll0467 Reverse -179 -198 8.16011 0.25
sll0587 Reverse -126 -145 7.17681 0.276
ssl0546 Reverse -363 -382 9.63507 0.201
ssl0511 Forward -225 -206 8.16011 0.25
slr0788 Reverse -304 -323 8.16011 0.25
slr0788 Reverse -151 -170 7.37347 0.266
sll0659 Reverse -136 -155 10.7167 0.171
slr0032 Reverse -149 -168 10.7167 0.171
slr0036 Reverse -152 -171 10.7167 0.171
slr0527 Forward -289 -270 8.16011 0.25
slr0926 Forward -174 -155 9.24175 0.211
slr0550 Forward -292 -273 8.25844 0.248
sll1333 Reverse -225 -244 10.3234 0.178
slr1463 Forward -220 -201 25.073 0.00461
sll0626 Forward -230 -211 7.86512 0.255
sll1499 Reverse -19 -38 15.6332 0.109
sll1470 Forward -67 -48 8.35677 0.248
slr1588 Reverse -162 -181 8.35677 0.248
slr1653 Reverse -117 -136 8.35677 0.248
sll1549 Forward -194 -175 10.3234 0.178
slr1655 Reverse -311 -330 10.3234 0.178
sll0441 Reverse -251 -270 11.2084 0.168
sll1109 Reverse -344 -363 7.86512 0.255
sll1108 Forward -151 -132 11.0117 0.171
slr1181 Reverse -306 -325 11.0117 0.171
slr1183 Reverse -328 -347 16.9115 0.0964
slr1188 Forward -250 -231 9.34008 0.211
slr0601 Reverse -203 -222 9.43841 0.206
ssl5007 Forward -151 -132 17.2065 0.0964
ssl5008 Reverse -132 -151 10.815 0.171
ssr5009 Reverse -364 -383 17.2065 0.0964
ssr5009 Forward -52 -33 10.815 0.171
sll5048 Forward -276 -257 11.7 0.163
sll5052 Forward -234 -215 9.83173 0.2
slr5073 Reverse -237 -256 6.78348 0.282
ssl5091 Forward -151 -132 12.7816 0.159
ssr5092 Reverse -221 -240 12.7816 0.159
sll5094 Reverse -131 -150 8.65176 0.236
slr5111 Reverse -291 -310 6.78348 0.282
ssl7048 Reverse -110 -129 15.5349 0.109
slr7049 Forward -95 -76 15.5349 0.109
sll8004 Forward -391 -372 7.66846 0.255
sll8007 Forward -213 -194 7.07848 0.281
ssl8039 Reverse -124 -143 8.06178 0.254
ssr6002 Forward -151 -132 17.2065 0.0964
slr6008 Reverse -184 -203 11.5033 0.163
slr6057 Reverse -53 -72 10.6184 0.175
ssl6061 Reverse -165 -184 7.4718 0.262
ssr6062 Forward -151 -132 7.4718 0.262
slr6067 Reverse -184 -203 11.5033 0.163
6803t15 Forward -162 -143 7.27514 0.269
6803t24 Forward -99 -80 7.76679 0.255
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.727  0.000  0.273  
0.000 0.455 0.364 0.182
0.000 0.273 0.727 0.000
0.000 1.000 0.000 0.000
0.636 0.000 0.273 0.091
1.000 0.000 0.000 0.000
0.000 0.091 0.091 0.818
0.364 0.455 0.182 0.000
0.182 0.000 0.545 0.273
0.000 0.182 0.545 0.273
0.000 0.455 0.273 0.273
0.273 0.455 0.000 0.273
0.182 0.818 0.000 0.000
0.091 0.909 0.000 0.000
0.091 0.273 0.364 0.273
0.000 1.000 0.000 0.000
0.182 0.091 0.273 0.455
0.000 0.182 0.818 0.000
0.000 1.000 0.000 0.000
0.273 0.727 0.000 0.000