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Details for NP_442337.1_6

Name NP_442337.1_6
Length 20
Regular expression TGG[CG]CCTG[GT]TG[GC]TG[GT][CGA][CG][ACG][AC][TC]
Central Yes

Motif logo

Genes containing this motif

115 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1125 Forward -269 -250 20.7685 0.0528
sll1325 Forward -255 -236 15.4966 0.198
sll1041 Reverse -132 -151 15.5942 0.198
slr1107 Reverse -299 -318 16.2776 0.184
slr1773 Reverse -89 -108 14.0322 0.245
sll1655 Forward -377 -358 13.544 0.251
ssl2384 Reverse -250 -269 12.5678 0.286
ssl1972 Reverse -377 -396 13.1535 0.263
slr0670 Reverse -314 -333 12.4701 0.291
slr1592 Reverse -54 -73 13.9346 0.245
slr1594 Forward -262 -243 13.8369 0.245
slr1043 Reverse -103 -122 14.4227 0.245
slr1051 Reverse -270 -289 14.1298 0.245
sll1942 Forward -224 -205 19.2065 0.0936
sll1939 Reverse -122 -141 16.961 0.168
slr2048 Forward -89 -70 13.4464 0.251
slr1020 Reverse -357 -376 14.9108 0.245
sll1283 Forward -319 -300 14.3251 0.245
sll1581 Reverse -377 -396 16.18 0.184
slr1702 Forward -100 -81 16.18 0.184
slr1703 Reverse -380 -399 13.9346 0.245
ssl3441 Forward -298 -279 13.6417 0.245
sll1804 Reverse -70 -89 12.3725 0.3
sll1800 Reverse -60 -79 12.3725 0.3
sll1121 Reverse -217 -236 13.4464 0.251
ssr2060 Reverse -134 -153 13.1535 0.263
sll1282 Reverse -149 -168 13.2512 0.263
sll1281 Reverse -27 -46 16.4729 0.184
sll1276 Reverse -188 -207 18.7183 0.0936
sll1276 Reverse -239 -258 13.1535 0.263
sll0868 Reverse -255 -274 13.3488 0.257
sll0863 Forward -43 -24 12.4701 0.291
slr1865 Forward -204 -185 14.4227 0.245
sll1769 Reverse -251 -270 17.6444 0.131
sll1765 Forward -198 -179 18.9136 0.0936
sll1764 Forward -235 -216 16.4729 0.184
sll1764 Forward -184 -165 15.8871 0.184
slr1880 Forward -299 -280 12.763 0.277
slr1887 Reverse -195 -214 13.8369 0.245
sll0839 Reverse -323 -342 12.5678 0.286
sll1164 Reverse -212 -231 15.8871 0.184
sll1159 Forward -398 -379 15.4966 0.198
slr1245 Reverse -171 -190 15.4966 0.198
sll1151 Forward -330 -311 18.3278 0.105
slr0263 Reverse -110 -129 14.5203 0.245
ssr3532 Reverse -314 -333 14.6179 0.245
sll1423 Reverse -191 -210 13.8369 0.245
slr1506 Forward -244 -225 13.8369 0.245
sll1221 Forward -210 -191 17.4492 0.131
sll1250 Forward -115 -96 13.7393 0.245
ssl3580 Forward -151 -132 19.4993 0.0936
sll1894 Reverse -369 -388 12.8606 0.273
slr1966 Reverse -318 -337 13.0559 0.263
slr1978 Forward -217 -198 12.9583 0.268
slr1285 Reverse -379 -398 13.0559 0.263
slr1533 Forward -247 -228 15.9847 0.184
sll1558 Reverse -305 -324 17.9373 0.125
sll1534 Reverse -363 -382 13.0559 0.263
sll1528 Reverse -88 -107 14.1298 0.245
slr0163 Reverse -265 -284 12.5678 0.286
sll0136 Forward -348 -329 15.8871 0.184
sll0945 Reverse -62 -81 14.7156 0.245
sll0300 Reverse -33 -52 13.3488 0.257
slr0379 Reverse -167 -186 16.0824 0.184
slr0380 Reverse -76 -95 14.0322 0.245
sll0753 Forward -59 -40 14.0322 0.245
slr0342 Reverse -296 -315 18.6207 0.0936
ssl0787 Reverse -337 -356 13.9346 0.245
sll0058 Forward -304 -285 12.5678 0.286
sll0459 Forward -228 -209 12.4701 0.291
slr0483 Forward -136 -117 14.2274 0.245
sll0454 Forward -384 -365 13.0559 0.263
sll0683 Forward -168 -149 13.6417 0.245
slr0639 Forward -144 -125 14.4227 0.245
sll0385 Forward -247 -228 14.8132 0.245
slr0420 Forward -163 -144 16.5705 0.184
sll0371 Reverse -155 -174 12.763 0.277
slr0427 Forward -372 -353 17.5468 0.131
slr0196 Reverse -14 -33 12.6654 0.285
sll0183 Forward -80 -61 13.6417 0.245
slr0918 Reverse -325 -344 13.544 0.251
slr0922 Reverse -62 -81 15.1061 0.233
sgl0001 Forward -342 -323 12.5678 0.286
sll0833 Forward -381 -362 14.3251 0.245
ssl1552 Forward -196 -177 21.0614 0.0528
sll0083 Forward -269 -250 12.6654 0.285
slr0615 Reverse -265 -284 14.9108 0.245
sll0586 Forward -255 -236 13.1535 0.263
slr0623 Reverse -109 -128 13.1535 0.263
sll0584 Forward -392 -373 13.7393 0.245
sll0789 Forward -146 -127 13.7393 0.245
slr0701 Forward -254 -235 12.8606 0.273
sll0672 Forward -162 -143 12.9583 0.268
sll0739 Forward -162 -143 13.0559 0.263
sll0027 Forward -197 -178 14.2274 0.245
slr0527 Reverse -276 -295 13.6417 0.245
sll0499 Reverse -318 -337 14.7156 0.245
slr0544 Forward -110 -91 14.7156 0.245
sll1343 Forward -314 -295 14.1298 0.245
slr1424 Reverse -361 -380 14.1298 0.245
sll1340 Reverse -62 -81 12.763 0.277
slr0656 Forward -107 -88 17.6444 0.131
slr1576 Forward -368 -349 16.2776 0.184
sll1470 Reverse -335 -354 13.7393 0.245
slr1659 Reverse -337 -356 13.4464 0.251
sll5035 Forward -357 -338 19.1088 0.0936
sll5042 Forward -289 -270 13.4464 0.251
sll5048 Forward -192 -173 15.399 0.204
sll5061 Reverse -343 -362 12.9583 0.268
sll5072 Forward -43 -24 21.94 0.04
slr5073 Reverse -192 -211 21.94 0.04
slr5082 Reverse -46 -65 18.7183 0.0936
slr5119 Reverse -46 -65 14.1298 0.245
slr7092 Reverse -16 -35 12.8606 0.273
slr6040 Forward -146 -127 13.7393 0.245
slr6043 Reverse -345 -364 13.9346 0.245
6803t41 Reverse -253 -272 16.2776 0.184
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.048 0.095 0.857 0.000
0.095 0.000 0.714 0.190
0.000 0.619 0.333 0.048
0.143 0.667 0.095 0.095
0.095 0.619 0.190 0.095
0.143 0.000 0.143 0.714
0.095 0.048 0.810 0.048
0.095 0.000 0.667 0.238
0.190 0.000 0.143 0.667
0.048 0.000 0.952 0.000
0.143 0.333 0.524 0.000
0.000 0.143 0.000 0.857
0.000 0.000 0.810 0.190
0.048 0.000 0.667 0.286
0.238 0.381 0.333 0.048
0.143 0.476 0.333 0.048
0.524 0.238 0.238 0.000
0.619 0.238 0.143 0.000
0.000 0.286 0.000 0.714