Your browser is old and dusty. Try Google Chrome!

Details for NP_442335.1_7

Name NP_442335.1_7
Length 15
Regular expression CC[GA]CT[GC]GC[CT][TG][GC][AG]AT[CT]
Central No

Motif logo

Genes containing this motif

49 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1318 Reverse -311 -325 13.2736 0.261
sll1398 Forward -210 -196 15.3386 0.182
slr1099 Forward -285 -271 14.7486 0.204
slr1778 Forward -385 -371 16.8135 0.146
sll1662 Forward -382 -368 12.2903 0.27
sll1185 Reverse -302 -316 17.2068 0.146
slr2032 Reverse -301 -315 12.9786 0.261
slr1391 Reverse -185 -199 14.4536 0.204
sll1787 Reverse -294 -308 12.5853 0.27
slr1201 Reverse -136 -150 13.4703 0.25
slr1207 Reverse -115 -129 12.3887 0.27
slr1808 Reverse -321 -335 13.1753 0.261
sll1155 Reverse -48 -62 15.5352 0.179
slr2082 Forward -200 -186 12.9786 0.261
sll1988 Reverse -261 -275 12.782 0.264
slr2099 Forward -166 -152 12.487 0.27
slr1519 Reverse -177 -191 15.7319 0.172
sll0817 Reverse -350 -364 14.4536 0.204
sll1252 Forward -169 -155 13.8636 0.228
sll1883 Forward -280 -266 12.3887 0.27
slr1697 Reverse -298 -312 11.9953 0.289
slr0448 Reverse -111 -125 14.2569 0.213
sll0295 Forward -310 -296 12.8803 0.264
sll0368 Forward -294 -280 14.6503 0.204
slr0426 Reverse -43 -57 14.6503 0.204
sll0546 Reverse -61 -75 12.782 0.264
slr0582 Forward -292 -278 15.3386 0.182
slr0836 Reverse -83 -97 12.0937 0.283
slr0514 Reverse -350 -364 13.8636 0.228
sll0594 Forward -39 -25 17.3052 0.146
ssr1038 Reverse -275 -289 16.3219 0.146
slr0099 Reverse -335 -349 12.9786 0.261
sll0739 Forward -166 -152 13.077 0.261
sll0504 Reverse -276 -290 12.3887 0.27
slr0542 Forward -125 -111 12.2903 0.27
sll1489 Forward -383 -369 14.4536 0.204
sll5044 Forward -71 -57 12.6836 0.267
slr5054 Forward -292 -278 21.3367 0.146
sll7009 Reverse -204 -218 14.5519 0.204
ssr7018 Reverse -368 -382 16.2235 0.146
ssr7018 Reverse -295 -309 16.2235 0.146
ssr7018 Reverse -223 -237 16.2235 0.146
ssr7018 Reverse -151 -165 16.2235 0.146
ssr7018 Reverse -79 -93 16.2235 0.146
ssr7018 Reverse -10 -24 16.2235 0.146
ssl7019 Forward -350 -336 16.2235 0.146
ssl7019 Forward -276 -262 16.2235 0.146
ssl7019 Forward -198 -184 16.2235 0.146
ssl7019 Forward -124 -110 16.2235 0.146
ssl7019 Forward -50 -36 16.2235 0.146
ssl7020 Forward -351 -337 16.2235 0.146
ssl7020 Forward -277 -263 16.2235 0.146
ssl7020 Forward -204 -190 16.2235 0.146
ssl7020 Forward -134 -120 16.2235 0.146
ssl7020 Forward -61 -47 16.2235 0.146
ssl7021 Forward -113 -99 16.2235 0.146
ssl7021 Forward -45 -31 16.2235 0.146
slr7023 Reverse -374 -388 16.2235 0.146
sll7030 Reverse -58 -72 13.4703 0.25
slr7082 Reverse -120 -134 14.0603 0.222
slr8021 Reverse -286 -300 12.2903 0.27
ssr6024 Forward -237 -223 16.9119 0.146
ssr6083 Forward -237 -223 16.9119 0.146
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.182  0.818  0.000  0.000  
0.000 1.000 0.000 0.000
0.364 0.000 0.636 0.000
0.091 0.909 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.273 0.636 0.091
0.000 0.000 0.909 0.091
0.000 1.000 0.000 0.000
0.000 0.545 0.000 0.455
0.000 0.000 0.273 0.727
0.000 0.364 0.455 0.182
0.727 0.000 0.273 0.000
0.818 0.000 0.182 0.000
0.000 0.091 0.000 0.909
0.091 0.636 0.000 0.273