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Details for NP_442327.1_3

Name NP_442327.1_3
Length 20
Regular expression T[AC]A[AC][CAT]C[TC][TA][TA]A[TC][TG]TAAA[GT][TA]TT
Central Yes

Motif logo

Genes containing this motif

193 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1401 Forward -258 -239 6.54077 0.26
sll1396 Forward -382 -363 6.44528 0.26
slr1498 Reverse -24 -43 6.44528 0.26
sll1393 Reverse -125 -144 6.82725 0.26
slr1120 Forward -124 -105 8.73709 0.224
sll1053 Forward -44 -25 6.73176 0.26
sll1053 Reverse -23 -42 4.53544 0.283
slr1123 Reverse -225 -244 6.73176 0.26
slr1123 Forward -246 -227 4.53544 0.283
slr1125 Reverse -334 -353 7.68668 0.243
ssl1326 Reverse -101 -120 5.20389 0.28
slr0734 Forward -196 -177 5.20389 0.28
slr0739 Reverse -123 -142 14.2756 0.165
ssl0426 Forward -142 -123 6.63627 0.26
slr0239 Reverse -90 -109 6.63627 0.26
slr1103 Reverse -130 -149 4.53544 0.283
slr1789 Forward -125 -106 14.8486 0.158
slr1791 Forward -35 -16 4.53544 0.283
sll1201 Forward -78 -59 5.58586 0.276
slr1291 Reverse -148 -167 5.58586 0.276
sll0934 Forward -190 -171 8.83258 0.224
sll0926 Forward -26 -7 4.24897 0.3
slr1611 Forward -60 -41 4.91741 0.283
slr1076 Reverse -30 -49 4.53544 0.283
sll1020 Forward -64 -45 4.53544 0.283
slr1090 Reverse -32 -51 4.53544 0.283
slr1590 Forward -58 -39 7.11373 0.26
sll1514 Reverse -163 -182 8.16414 0.227
sll1510 Reverse -98 -117 5.77684 0.276
sll1504 Reverse -110 -129 5.39487 0.279
slr1047 Forward -273 -254 16.7584 0.156
slr1764 Forward -366 -347 5.1084 0.28
ssr3465 Reverse -303 -322 5.58586 0.276
slr1908 Reverse -352 -371 10.074 0.203
sll1835 Forward -79 -60 5.29938 0.28
sll1920 Reverse -149 -168 5.96782 0.276
sll1920 Forward -181 -162 5.77684 0.276
slr2023 Forward -40 -21 5.96782 0.276
slr2023 Reverse -8 -27 5.77684 0.276
sll1913 Forward -41 -22 9.50102 0.212
slr1135 Reverse -269 -288 5.1084 0.28
sll1080 Reverse -3 -22 4.34446 0.296
sll1074 Forward -224 -205 9.21455 0.212
ssl3446 Forward -325 -306 4.82192 0.283
sll1796 Forward -348 -329 5.87233 0.276
ssr2016 Reverse -104 -123 6.34979 0.261
slr1211 Reverse -87 -106 15.899 0.158
slr2078 Forward -296 -277 9.59652 0.208
slr1538 Reverse -199 -218 9.11906 0.215
ssr2061 Reverse -3 -22 14.0846 0.165
slr1238 Reverse -350 -369 14.0846 0.165
slr1238 Reverse -313 -332 4.91741 0.283
ssr2062 Forward -269 -250 12.4613 0.182
slr1437 Reverse -231 -250 10.4559 0.199
sll1280 Reverse -96 -115 5.0129 0.281
slr1356 Forward -298 -279 5.0129 0.281
sll0873 Reverse -256 -275 7.20922 0.26
slr0881 Forward -185 -166 7.20922 0.26
sll0872 Reverse -112 -131 4.53544 0.283
slr0882 Forward -42 -23 4.53544 0.283
slr0888 Reverse -185 -204 7.97315 0.227
sll0861 Forward -112 -93 11.0289 0.186
slr1865 Forward -124 -105 5.96782 0.276
sll1755 Reverse -56 -75 11.6018 0.182
slr1887 Forward -21 -2 11.6018 0.182
sll2012 Reverse -190 -209 5.39487 0.279
slr1813 Forward -360 -341 5.29938 0.28
slr1816 Reverse -6 -25 5.87233 0.276
sll1621 Forward -132 -113 4.63094 0.283
slr1738 Reverse -179 -198 4.63094 0.283
sll0848 Forward -22 -3 7.97315 0.227
sll1165 Forward -35 -16 11.2199 0.185
sll1165 Forward -24 -5 8.6416 0.225
sll1165 Reverse -4 -23 6.44528 0.26
slr1243 Reverse -123 -142 11.2199 0.185
slr1243 Reverse -134 -153 8.6416 0.225
slr1243 Forward -154 -135 6.44528 0.26
sll1162 Forward -70 -51 9.02356 0.219
sll1162 Reverse -23 -42 5.87233 0.276
slr1250 Forward -43 -24 4.63094 0.283
sll1961 Forward -90 -71 6.34979 0.261
sll1957 Forward -246 -227 4.53544 0.283
slr2057 Reverse -126 -145 4.53544 0.283
sll1949 Reverse -302 -321 12.9387 0.182
slr2067 Forward -45 -26 12.9387 0.182
sll0249 Forward -54 -35 8.73709 0.224
slr0270 Forward -69 -50 7.4002 0.254
sll1430 Reverse -175 -194 4.91741 0.283
slr1522 Reverse -204 -223 6.06331 0.276
slr2116 Forward -193 -174 5.1084 0.28
slr2117 Reverse -32 -51 10.7424 0.199
slr2120 Reverse -98 -117 6.54077 0.26
sll1994 Reverse -24 -43 7.4002 0.254
slr2130 Forward -387 -368 7.4002 0.254
sll1241 Reverse -91 -110 6.82725 0.26
slr1331 Reverse -341 -360 7.01823 0.26
slr1334 Forward -193 -174 8.54611 0.227
sll0815 Reverse -360 -379 11.6018 0.182
slr1958 Reverse -59 -78 5.0129 0.281
sll1890 Forward -95 -76 8.73709 0.224
slr1969 Reverse -97 -116 8.73709 0.224
sll1876 Forward -39 -20 6.92274 0.26
slr1983 Reverse -144 -163 5.0129 0.281
sll1174 Reverse -363 -382 6.73176 0.26
slr1282 Reverse -324 -343 11.4109 0.185
slr1152 Forward -291 -272 8.35512 0.227
ssl2148 Forward -59 -40 10.5514 0.199
slr1164 Reverse -243 -262 10.5514 0.199
slr1171 Forward -37 -18 9.21455 0.212
sll1555 Forward -321 -302 4.24897 0.3
ssr2831 Reverse -257 -276 4.24897 0.3
slr0957 Forward -171 -152 17.9998 0.156
sll1541 Reverse -75 -94 12.6523 0.182
ssr2723 Forward -53 -34 12.6523 0.182
sll0267 Reverse -169 -188 8.06865 0.227
sll0266 Forward -108 -89 6.73176 0.26
slr0285 Reverse -185 -204 18.1908 0.156
slr0147 Forward -309 -290 5.29938 0.28
slr1932 Forward -35 -16 6.92274 0.26
sll1862 Forward -59 -40 7.11373 0.26
slr1945 Forward -277 -258 6.34979 0.261
slr0324 Forward -395 -376 10.4559 0.199
sll0297 Reverse -371 -390 4.53544 0.283
sll0295 Forward -225 -206 5.68135 0.276
slr0335 Reverse -66 -85 5.68135 0.276
slr0335 Reverse -380 -399 4.63094 0.283
slr0180 Reverse -176 -195 6.44528 0.26
slr0364 Reverse -291 -310 9.59652 0.208
sll0772 Reverse -351 -370 6.92274 0.26
sll0757 Forward -266 -247 9.97848 0.203
smr0001 Reverse -5 -24 9.97848 0.203
slr0780 Reverse -254 -273 9.97848 0.203
sll0755 Reverse -255 -274 16.3764 0.156
sll0016 Reverse -250 -269 11.1244 0.185
sll0016 Reverse -249 -268 9.88299 0.203
slr0006 Forward -149 -130 11.1244 0.185
slr0006 Forward -150 -131 9.88299 0.203
sll0204 Forward -31 -12 11.6018 0.182
slr0222 Reverse -106 -125 11.6018 0.182
sll0194 Forward -194 -175 12.9387 0.182
slr0229 Reverse -199 -218 12.9387 0.182
slr0050 Forward -304 -285 8.35512 0.227
sll0068 Forward -94 -75 4.72643 0.283
slr0469 Forward -126 -107 5.68135 0.276
slr0489 Reverse -128 -147 7.97315 0.227
sll0601 Reverse -121 -140 5.39487 0.279
slr0649 Forward -264 -245 5.39487 0.279
sll0385 Reverse -91 -110 5.49036 0.279
sll0382 Forward -105 -86 12.0793 0.182
ssr0692 Forward -46 -27 15.326 0.158
ssl0331 Forward -74 -55 9.31004 0.212
ssl0331 Reverse -49 -68 5.58586 0.276
slr0212 Reverse -136 -155 9.31004 0.212
slr0212 Forward -161 -142 5.58586 0.276
sll0178 Forward -177 -158 14.9441 0.158
slr0901 Reverse -156 -175 5.20389 0.28
ssr1527 Reverse -63 -82 5.20389 0.28
slr0903 Reverse -314 -333 5.20389 0.28
slr0907 Forward -189 -170 21.6285 0.109
slr0924 Reverse -159 -178 4.53544 0.283
sll0549 Forward -27 -8 9.31004 0.212
slr0569 Reverse -269 -288 9.31004 0.212
sll0541 Forward -110 -91 14.7531 0.158
slr0580 Reverse -1 -20 14.7531 0.158
slr0506 Forward -28 -9 11.4109 0.185
sll0467 Forward -37 -18 5.49036 0.279
slr0111 Forward -32 -13 5.96782 0.276
slr0120 Forward -59 -40 10.6469 0.199
slr0302 Reverse -102 -121 6.2543 0.267
sll0792 Forward -44 -25 8.16414 0.227
slr0798 Reverse -108 -127 8.16414 0.227
sll0670 Forward -94 -75 8.16414 0.227
slr0712 Reverse -355 -374 5.87233 0.276
sll0744 Reverse -181 -200 11.9838 0.182
sll0743 Reverse -339 -358 5.1084 0.28
sll0899 Reverse -93 -112 11.9838 0.182
ssr1562 Forward -150 -131 11.9838 0.182
sll0522 Forward -326 -307 7.11373 0.26
sll1334 Forward -110 -91 8.45061 0.227
slr1429 Reverse -202 -221 8.45061 0.227
slr1453 Forward -237 -218 7.78217 0.238
sll1491 Forward -81 -62 6.44528 0.26
slr1568 Reverse -110 -129 4.72643 0.283
sll1483 Reverse -38 -57 5.39487 0.279
sll1476 Forward -147 -128 4.72643 0.283
slr1583 Reverse -35 -54 4.72643 0.283
sll1473 Reverse -22 -41 12.0793 0.182
sll1473 Reverse -21 -40 5.68135 0.276
slr0750 Reverse -94 -113 6.06331 0.276
sll0732 Forward -368 -349 16.8539 0.156
slr0753 Reverse -182 -201 16.8539 0.156
sll0723 Reverse -372 -391 6.54077 0.26
sll1549 Reverse -377 -396 9.97848 0.203
slr1655 Forward -128 -109 9.97848 0.203
slr1179 Reverse -70 -89 7.01823 0.26
slr5012 Forward -85 -66 6.63627 0.26
sll5032 Reverse -12 -31 4.82192 0.283
sll5042 Reverse -125 -144 7.4002 0.254
slr5077 Forward -362 -343 5.20389 0.28
slr5118 Forward -23 -4 6.92274 0.26
sll7106 Reverse -161 -180 7.97315 0.227
slr7011 Forward -36 -17 6.63627 0.26
slr7060 Reverse -5 -24 5.1084 0.28
slr7068 Reverse -313 -332 5.87233 0.276
slr6022 Reverse -274 -293 11.6973 0.182
slr6022 Reverse -322 -341 9.59652 0.208
slr6044 Reverse -4 -23 5.68135 0.276
slr6057 Forward -33 -14 4.43995 0.289
slr6081 Reverse -274 -293 11.6973 0.182
slr6081 Reverse -322 -341 9.59652 0.208
slr6108 Reverse -49 -68 13.3207 0.182
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.100  0.100  0.000  0.800  
0.700 0.300 0.000 0.000
0.900 0.000 0.000 0.100
0.700 0.200 0.100 0.000
0.300 0.400 0.000 0.300
0.100 0.800 0.100 0.000
0.100 0.200 0.000 0.700
0.300 0.000 0.000 0.700
0.200 0.000 0.000 0.800
0.900 0.000 0.000 0.100
0.000 0.200 0.000 0.800
0.000 0.000 0.200 0.800
0.100 0.000 0.000 0.900
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000
0.900 0.000 0.000 0.100
0.000 0.000 0.600 0.400
0.400 0.000 0.000 0.600
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000