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Details for NP_442321.1_1

Name NP_442321.1_1
Length 20
Regular expression GA[GA]GCGATGGC[CT]CA[GA]GTGGG
Central No

Motif logo

Genes containing this motif

253 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1393 Reverse -332 -351 0.687771 0.155
slr1113 Forward -334 -315 -6.98204 0.246
slr1117 Reverse -206 -225 -0.4922 0.172
sll1045 Reverse -139 -158 -5.50708 0.218
sll0698 Forward -302 -283 5.01433 0.106
slr0743a Forward -150 -131 8.35759 0.0887
sll1325 Reverse -60 -79 3.73603 0.126
sll1324 Forward -292 -273 -8.55534 0.292
slr1097 Forward -207 -188 -7.96535 0.278
sll1032 Reverse -242 -261 -6.88371 0.246
sll1683 Forward -287 -268 4.12936 0.12
slr1795 Forward -160 -141 -8.85033 0.296
sll1184 Forward -142 -123 -8.16202 0.284
sll0932 Forward -157 -138 -6.88371 0.246
sll0922 Reverse -294 -313 -8.35868 0.287
slr0976 Reverse -234 -253 -7.96535 0.278
slr1610 Forward -53 -34 -7.76869 0.273
slr1611 Forward -115 -96 2.26107 0.148
sll1019 Reverse -311 -330 -5.31042 0.216
sll0656 Forward -205 -186 -4.72043 0.216
sll0649 Forward -325 -306 -4.03212 0.214
sll0648 Reverse -190 -209 6.88262 0.0887
sll0647 Reverse -20 -39 -6.78538 0.246
sll0635 Forward -203 -184 -0.197208 0.169
sll1500 Reverse -8 -27 -6.49039 0.24
slr1051 Forward -160 -141 -7.96535 0.278
slr1052 Reverse -217 -236 2.45773 0.144
slr1761 Forward -41 -22 9.73422 0.0887
sll1643 Forward -324 -305 -5.11376 0.216
slr1763 Forward -213 -194 -4.52377 0.216
sll1635 Reverse -90 -109 -8.16202 0.284
ssr3451 Reverse -216 -235 -5.50708 0.218
slr1908 Forward -246 -227 -5.70374 0.225
slr1022 Reverse -208 -227 -1.7705 0.196
sll0981 Forward -382 -363 -8.26035 0.287
sll1292 Forward -25 -6 -8.55534 0.292
sll1285 Forward -279 -260 -6.39206 0.24
ssr2843 Reverse -275 -294 0.392778 0.157
slr2009 Reverse -75 -94 -6.39206 0.24
sll1915 Reverse -341 -360 -0.39387 0.171
slr2027 Forward -38 -19 5.89931 0.102
slr2030 Reverse -8 -27 -3.04881 0.214
sll1076 Reverse -70 -89 -7.27704 0.258
slr1149 Reverse -214 -233 -5.99873 0.23
sll1823 Reverse -234 -253 -5.80207 0.226
ssl3446 Forward -249 -230 -0.983855 0.175
sll1812 Forward -189 -170 0.884433 0.155
sll1803 Reverse -182 -201 -3.3438 0.214
ssl3432 Forward -389 -370 0.884433 0.155
slr1895 Forward -356 -337 -6.58872 0.243
slr1899 Reverse -89 -108 -3.63879 0.214
slr1901 Forward -131 -112 -3.83545 0.214
sll1787 Reverse -155 -174 -1.18052 0.176
sll1787 Forward -304 -285 -1.67217 0.194
slr1207 Forward -352 -333 7.66927 0.0887
sll1971 Forward -322 -303 -3.83545 0.214
sll1739 Forward -349 -330 -2.45882 0.213
sll1730 Reverse -228 -247 -5.80207 0.226
slr1834 Forward -188 -169 -5.80207 0.226
sll1725 Reverse -177 -196 -2.16383 0.212
slr1840 Forward -332 -313 -5.21209 0.216
slr1843 Forward -298 -279 -6.49039 0.24
sll1713 Forward -247 -228 -6.29373 0.238
sll1466 Reverse -302 -321 0.58944 0.155
ssl2823 Reverse -68 -87 0.58944 0.155
sll1462 Reverse -226 -245 4.62101 0.112
slr1549 Reverse -190 -209 -6.49039 0.24
sll1142 Forward -84 -65 -0.39387 0.171
sll1127 Forward -157 -138 -5.01543 0.216
slr1239 Reverse -44 -63 -5.01543 0.216
slr1240 Forward -338 -319 -1.08219 0.176
slr1241 Reverse -174 -193 0.687771 0.155
sll1353 Reverse -226 -245 7.86593 0.0887
sll1353 Forward -117 -98 -0.983855 0.175
sll1352 Reverse -204 -223 -7.17871 0.255
slr1450 Forward -193 -174 -6.98204 0.246
sll1281 Reverse -15 -34 -3.63879 0.214
slr1366 Forward -230 -211 -4.32711 0.216
sll1271 Forward -194 -175 -4.72043 0.216
sll0876 Forward -306 -287 -4.42544 0.216
sll0876 Forward -38 -19 -5.50708 0.218
ssl1633 Reverse -118 -137 -8.45701 0.291
sll0869 Forward -156 -137 -5.50708 0.218
sll0862 Forward -323 -304 -4.22878 0.216
sll1308 Forward -181 -162 -3.04881 0.214
slr1406 Reverse -211 -230 -3.04881 0.214
sll1305 Forward -77 -58 14.8474 0.0363
slr1854 Reverse -35 -54 -4.81876 0.216
slr1859 Reverse -125 -144 -4.52377 0.216
slr1866 Forward -196 -177 -5.50708 0.218
sll1776 Forward -198 -179 -5.11376 0.216
sll1772 Forward -205 -186 -7.17871 0.255
sll1764 Forward -191 -172 -3.93378 0.214
ssr3189 Forward -384 -365 -3.63879 0.214
sll2009 Forward -191 -172 -8.65367 0.292
slr2144 Reverse -349 -368 -0.885524 0.175
sll1704 Forward -368 -349 -7.67036 0.272
slr1809 Forward -269 -250 -8.55534 0.292
sll1698 Forward -66 -47 -0.885524 0.175
sll1691 Reverse -314 -333 -6.58872 0.243
slr1734 Reverse -311 -330 -3.3438 0.214
sll0849 Reverse -368 -387 -6.98204 0.246
slr0863 Forward -252 -233 -2.26216 0.212
slr1254 Forward -335 -316 -7.86702 0.276
slr1255 Reverse -71 -90 -8.16202 0.284
sll1950 Forward -42 -23 -8.85033 0.296
slr1986 Forward -212 -193 -5.31042 0.216
slr1990 Reverse -366 -385 -0.197208 0.169
slr2002 Forward -151 -132 -4.6221 0.216
sll1606 Forward -291 -272 24.7789 0.00265
sll1605 Forward -174 -155 3.14605 0.126
slr1718 Reverse -89 -108 3.14605 0.126
slr1720 Forward -195 -176 -4.81876 0.216
sll1596 Forward -245 -226 -5.9004 0.228
slr1726 Reverse -5 -24 -5.70374 0.225
sll0254 Reverse -352 -371 3.24438 0.126
slr0260 Forward -359 -340 3.24438 0.126
sll0250 Forward -177 -158 -5.9004 0.228
slr2099 Reverse -369 -388 5.89931 0.102
slr2100 Forward -355 -336 0.687771 0.155
slr2102 Forward -318 -299 -4.81876 0.216
slr1508 Reverse -171 -190 -5.01543 0.216
sll1414 Forward -79 -60 -7.76869 0.273
ssr2549 Reverse -55 -74 -7.76869 0.273
slr1516 Forward -278 -259 -4.91709 0.216
slr2131 Forward -110 -91 -8.35868 0.287
sll1237 Forward -185 -166 -8.35868 0.287
sll1229 Forward -131 -112 -5.21209 0.216
sll1229 Reverse -172 -191 -6.29373 0.238
slr1330 Forward -186 -167 -2.26216 0.212
slr1332 Forward -22 -3 -8.55534 0.292
sll0818 Reverse -37 -56 -5.31042 0.216
slr0813 Reverse -345 -364 -6.98204 0.246
sll0812 Forward -202 -183 1.67108 0.155
ssr1386 Reverse -260 -279 1.67108 0.155
sll0809 Forward -226 -207 -8.35868 0.287
slr0817 Reverse -52 -71 -8.35868 0.287
slr0820 Forward -177 -158 -3.83545 0.214
sll1262 Forward -350 -331 -2.85214 0.214
sll1253 Reverse -236 -255 -5.11376 0.216
sll1900 Forward -365 -346 -6.49039 0.24
ssl3580 Forward -74 -55 -6.49039 0.24
sll1890 Forward -357 -338 4.52268 0.112
slr1971 Forward -224 -205 0.392778 0.157
sll1871 Reverse -187 -206 -8.752 0.295
sll1390 Reverse -65 -84 -4.81876 0.216
sll1374 Reverse -143 -162 -5.31042 0.216
sll1182 Forward -43 -24 -7.27704 0.258
sll1442 Forward -168 -149 -4.91709 0.216
sll1099 Forward -374 -355 -7.67036 0.272
sll1089 Forward -68 -49 -7.57203 0.268
slr1673 Forward -274 -255 -3.14714 0.214
slr1673 Forward -142 -123 -5.21209 0.216
slr1687 Reverse -269 -288 -4.13045 0.214
sll1557 Forward -317 -298 -4.42544 0.216
sll0914 Reverse -327 -346 -4.32711 0.216
ssr1600 Forward -95 -76 -2.95047 0.214
slr1645 Forward -278 -259 -6.98204 0.246
slr1647 Forward -113 -94 -8.45701 0.291
sll1521 Reverse -308 -327 -8.85033 0.296
slr0445 Reverse -203 -222 -0.000545616 0.167
slr0446 Reverse -306 -325 3.53937 0.126
slr0288 Reverse -309 -328 -6.68705 0.245
sll0364 Forward -299 -280 -4.13045 0.214
slr0402 Reverse -316 -335 -7.4737 0.262
sll1852 Reverse -225 -244 -5.21209 0.216
slr1946 Forward -27 -8 -3.73712 0.214
slr0992 Reverse -207 -226 1.0811 0.155
slr0326 Reverse -204 -223 -0.590531 0.174
slr0326 Reverse -150 -169 -8.752 0.295
ssl0294 Reverse -70 -89 -7.96535 0.278
slr0186 Forward -200 -181 -8.06369 0.281
slr0361 Reverse -204 -223 -4.42544 0.216
sll0350 Reverse -244 -263 -2.65548 0.214
sml0001 Reverse -190 -209 -0.787193 0.175
sml0001 Forward -203 -184 -7.4737 0.262
slr0363 Forward -217 -198 -2.65548 0.214
slr0376 Forward -309 -290 -8.06369 0.281
sll0766 Forward -202 -183 -7.4737 0.262
sll0760 Reverse -336 -355 -2.75381 0.214
sll0754 Forward -145 -126 -0.885524 0.175
slr0784 Reverse -233 -252 -4.91709 0.216
slr0220 Reverse -356 -375 5.11266 0.106
sll0195 Forward -179 -160 -6.78538 0.246
sll0192 Reverse -180 -199 -7.86702 0.276
slr0232 Reverse -354 -373 -5.11376 0.216
ssl0788 Forward -191 -172 -3.83545 0.214
sll0072 Forward -248 -229 0.687771 0.155
sll0072 Forward -394 -375 -8.85033 0.296
sll0065 Forward -382 -363 -4.13045 0.214
slr0060 Reverse -327 -346 -3.54046 0.214
slr0483 Forward -84 -65 9.14423 0.0887
slr0492 Reverse -164 -183 -3.14714 0.214
slr0492 Reverse -312 -331 -8.94866 0.3
slr0493 Reverse -329 -348 0.294447 0.158
sll0455 Reverse -206 -225 -4.6221 0.216
sll0681 Forward -225 -206 1.27776 0.155
sll0609 Forward -383 -364 1.17943 0.155
sll0608 Forward -114 -95 1.17943 0.155
slr0642 Reverse -289 -308 1.17943 0.155
sll0396 Reverse -238 -257 -8.35868 0.287
sll0385 Forward -68 -49 -6.78538 0.246
sll0189 Reverse -362 -381 -6.88371 0.246
sll0188 Reverse -308 -327 -4.03212 0.214
slr0196 Forward -305 -286 -6.09707 0.231
slr0199 Forward -167 -148 -6.09707 0.231
slr0901 Forward -374 -355 -8.65367 0.292
sll0891 Forward -52 -33 8.94757 0.0887
slr0922 Reverse -361 -380 -8.85033 0.296
sll0825 Forward -192 -173 -3.04881 0.214
slr0844 Reverse -272 -291 -3.04881 0.214
slr0845 Forward -243 -224 -6.88371 0.246
sll0086 Forward -156 -137 -7.4737 0.262
sll0082 Forward -88 -69 -6.88371 0.246
sll0078 Forward -279 -260 5.11266 0.106
sll0488 Reverse -180 -199 -4.03212 0.214
sll0470 Reverse -201 -220 8.65258 0.0887
sll0594 Forward -382 -363 -6.29373 0.238
slr0103 Reverse -252 -271 -8.35868 0.287
slr0103 Forward -281 -262 -8.65367 0.292
sll0094 Reverse -366 -385 -5.40875 0.218
sll0779 Reverse -43 -62 -7.4737 0.262
slr0698 Forward -387 -368 -7.86702 0.276
slr0710 Forward -224 -205 -6.68705 0.245
sll0745 Reverse -313 -332 -5.99873 0.23
sll0047 Forward -115 -96 -3.54046 0.214
sll0044 Forward -307 -288 -7.08038 0.251
sll0042 Forward -180 -161 -4.13045 0.214
sll0034 Reverse -267 -286 -8.06369 0.281
sll0506 Reverse -72 -91 -5.01543 0.216
sll0506 Forward -209 -190 -8.94866 0.3
sll0497 Reverse -125 -144 -8.65367 0.292
slr0545 Forward -52 -33 -8.65367 0.292
sll0900 Forward -162 -143 -8.752 0.295
ssl1004 Forward -150 -131 -5.21209 0.216
slr0557 Reverse -281 -300 18.0924 0.0187
slr1463 Reverse -208 -227 2.94938 0.129
sll0622 Forward -85 -66 -6.68705 0.245
sll1499 Reverse -105 -124 -4.72043 0.216
slr1560 Reverse -363 -382 -1.18052 0.176
slr0746 Forward -167 -148 -6.09707 0.231
slr0752 Forward -160 -141 1.76941 0.155
slr0456 Forward -265 -246 5.70265 0.102
slr0598 Forward -155 -136 -1.47551 0.187
slr0606 Forward -89 -70 0.884433 0.155
sll5035 Forward -364 -345 -3.63879 0.214
sll5046 Reverse -340 -359 -8.55534 0.292
sll5049 Forward -269 -250 -3.3438 0.214
slr5058 Reverse -255 -274 11.6025 0.0822
sll5072 Forward -308 -289 -8.26035 0.287
slr5073 Reverse -361 -380 -5.9004 0.228
sll7050 Reverse -74 -93 -7.37537 0.262
slr7052 Forward -277 -258 -7.37537 0.262
sll8049 Reverse -366 -385 -8.65367 0.292
ssl8003 Forward -188 -169 -7.76869 0.273
sll8027 Forward -137 -118 -2.45882 0.213
slr8029 Reverse -299 -318 -2.45882 0.213
ssr6032 Forward -184 -165 6.98095 0.0887
slr6033 Forward -203 -184 6.98095 0.0887
slr6091 Forward -203 -184 6.98095 0.0887
6803t05 Reverse -276 -295 -4.91709 0.216
6803t13 Forward -175 -156 -3.73712 0.214
6803t16 Forward -276 -257 -2.95047 0.214
6803t32 Forward -80 -61 -3.54046 0.214
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
1.000 0.000 0.000 0.000
0.417 0.000 0.583 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.167 0.750 0.083
0.917 0.083 0.000 0.000
0.000 0.000 0.083 0.917
0.000 0.000 0.917 0.083
0.083 0.000 0.917 0.000
0.000 1.000 0.000 0.000
0.000 0.500 0.083 0.417
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000
0.333 0.000 0.667 0.000
0.000 0.000 1.000 0.000
0.000 0.000 0.083 0.917
0.000 0.167 0.667 0.167
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000