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Details for NP_442287.1_3

Name NP_442287.1_3
Length 18
Regular expression C[CTG][CT][CA]A[AT]CA[AC][GC][CG][GC][AT]T[CA][AG][CA][CT]
Central Yes

Motif logo

Genes containing this motif

111 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1398 Reverse -36 -53 14.1977 0.287
slr1125 Reverse -311 -328 13.1161 0.297
slr1107 Reverse -205 -222 12.5261 0.3
slr1776 Reverse -381 -398 15.0827 0.23
slr1787 Forward -87 -70 14.3944 0.282
sll1659 Forward -96 -79 13.3128 0.294
slr0679 Forward -102 -85 13.8044 0.294
sll0644 Reverse -106 -123 13.0178 0.3
slr0686 Forward -90 -73 13.0178 0.3
slr1591 Reverse -299 -316 15.8694 0.188
ssl1918 Forward -287 -270 14.7877 0.26
slr1755 Reverse -372 -389 13.5094 0.294
sll1939 Reverse -169 -186 19.3109 0.0701
slr1907 Forward -221 -204 19.2126 0.0701
sll0995 Reverse -131 -148 13.7061 0.294
slr1023 Forward -156 -139 12.4278 0.3
ssl2542 Reverse -92 -109 13.2144 0.296
sll1573 Reverse -84 -101 12.4278 0.3
slr1705 Forward -272 -255 12.4278 0.3
slr2013 Reverse -288 -305 18.2293 0.1
sll1810 Reverse -321 -338 16.5577 0.176
slr1901 Reverse -309 -326 16.361 0.176
slr1200 Reverse -372 -389 13.6078 0.294
slr1207 Reverse -236 -253 12.4278 0.3
sll1965 Forward -182 -165 15.9677 0.188
slr2076 Reverse -349 -366 15.9677 0.188
sll1456 Reverse -68 -85 14.0994 0.287
slr1552 Forward -43 -26 14.0994 0.287
sll1350 Reverse -256 -273 17.246 0.139
slr1876 Forward -321 -304 12.7228 0.3
slr1879 Forward -109 -92 12.7228 0.3
slr2136 Forward -199 -182 12.4278 0.3
sll2003 Reverse -137 -154 19.0159 0.0701
slr2143 Forward -194 -177 19.0159 0.0701
slr1812 Forward -179 -162 16.656 0.173
slr1814 Forward -179 -162 16.361 0.176
slr1735 Forward -306 -289 14.0011 0.287
sll0856 Reverse -359 -376 12.4278 0.3
sll0847 Forward -124 -107 15.476 0.203
sll0236 Reverse -164 -181 12.5261 0.3
slr2122 Forward -187 -170 13.3128 0.294
slr2125 Reverse -221 -238 12.9194 0.3
sll1217 Reverse -267 -284 17.6393 0.131
sll0814 Reverse -195 -212 12.7228 0.3
slr0813 Reverse -237 -254 21.6709 0.0202
sll0808 Reverse -250 -267 13.3128 0.294
slr0821 Forward -171 -154 13.3128 0.294
slr0823 Forward -340 -323 13.1161 0.297
sll1870 Forward -29 -12 12.4278 0.3
sll1382 Forward -98 -81 15.0827 0.23
slr1474 Reverse -333 -350 15.0827 0.23
sll1443 Reverse -151 -168 16.2627 0.176
slr1530 Reverse -159 -176 22.9491 0.0119
ssr2806 Reverse -31 -48 15.8694 0.188
slr0936 Forward -131 -114 12.8211 0.3
slr0937 Forward -184 -167 20.9825 0.0278
slr0960 Forward -343 -326 13.4111 0.294
slr1641 Reverse -353 -370 16.2627 0.176
sll0426 Forward -50 -33 12.4278 0.3
slr0444 Reverse -138 -155 12.4278 0.3
sll0418 Reverse -117 -134 22.9491 0.0119
sll0269 Forward -228 -211 18.2293 0.1
sll1864 Reverse -214 -231 12.8211 0.3
slr1927 Forward -352 -335 12.8211 0.3
slr1938 Forward -284 -267 12.7228 0.3
slr1940 Forward -277 -260 15.5744 0.197
slr1944 Forward -69 -52 12.6244 0.3
slr1945 Reverse -374 -391 14.2961 0.287
slr0343 Forward -160 -143 15.6727 0.192
slr0008 Reverse -267 -284 13.2144 0.296
sll0006 Forward -367 -350 19.9992 0.0456
sll0192 Forward -275 -258 16.656 0.173
slr0434 Forward -228 -211 16.951 0.158
ssl0769 Forward -207 -190 13.5094 0.294
sll0682 Reverse -148 -165 12.5261 0.3
sll0616 Reverse -307 -324 12.8211 0.3
sll0383 Forward -296 -279 19.9992 0.0456
sll0378 Reverse -299 -316 15.6727 0.192
ssr1528 Forward -370 -353 14.0011 0.287
sll0891 Forward -186 -169 18.4259 0.0993
ssl1690 Forward -277 -260 13.3128 0.294
slr0921 Reverse -106 -123 13.3128 0.294
sll0545 Reverse -79 -96 14.0011 0.287
sll0832 Reverse -268 -285 17.246 0.139
ssr1407 Forward -42 -25 17.246 0.139
slr0833 Forward -310 -293 17.246 0.139
ssl1533 Reverse -376 -393 13.5094 0.294
slr0846 Forward -214 -197 13.6078 0.294
slr0095 Reverse -290 -307 13.5094 0.294
slr0099 Forward -327 -310 13.1161 0.297
slr0114 Forward -331 -314 13.6078 0.294
slr0119 Reverse -175 -192 12.8211 0.3
slr0301 Reverse -290 -307 14.0011 0.287
sll0785 Reverse -76 -93 12.7228 0.3
sll0033 Forward -265 -248 19.9992 0.0456
slr0527 Forward -250 -233 21.0809 0.0278
slr0527 Forward -315 -298 13.6078 0.294
slr0925 Reverse -258 -275 14.1977 0.287
sll0446 Forward -212 -195 15.771 0.192
slr0458 Forward -323 -306 14.4927 0.282
slr1192 Reverse -344 -361 13.9027 0.294
slr0610 Reverse -179 -196 13.2144 0.296
slr5010 Reverse -281 -298 14.5911 0.279
sll7064 Forward -257 -240 18.0326 0.108
sll7065 Reverse -85 -102 13.3128 0.294
sll7085 Forward -38 -21 16.066 0.188
slr7092 Forward -40 -23 16.2627 0.176
ssl8003 Forward -194 -177 12.5261 0.3
sll8006 Forward -399 -382 22.2608 0.0134
sll8007 Forward -52 -35 22.2608 0.0134
sll8034 Forward -336 -319 14.3944 0.282
slr8036 Reverse -302 -319 14.3944 0.282
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 0.357 0.286 0.357
0.000 0.571 0.000 0.429
0.357 0.571 0.071 0.000
0.929 0.000 0.000 0.071
0.643 0.000 0.071 0.286
0.000 0.929 0.071 0.000
0.786 0.071 0.000 0.143
0.429 0.429 0.071 0.071
0.000 0.357 0.571 0.071
0.000 0.786 0.214 0.000
0.000 0.429 0.571 0.000
0.500 0.071 0.000 0.429
0.000 0.143 0.000 0.857
0.214 0.714 0.000 0.071
0.500 0.000 0.429 0.071
0.214 0.643 0.143 0.000
0.000 0.714 0.000 0.286