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Details for NP_442215.1_1

Name NP_442215.1_1
Length 20
Regular expression GCA[GA]CGCCA[GT][CG]GC[ACG][GA]G[CA][AC][CG][CG]
Central Yes

Motif logo

Genes containing this motif

105 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1212 Forward -90 -71 4.62101 0.251
slr1319 Reverse -323 -342 3.24438 0.288
slr1491 Reverse -85 -104 2.94938 0.293
sll1043 Forward -322 -303 6.29264 0.225
slr0721 Forward -293 -274 11.9958 0.144
slr0721 Forward -287 -268 9.53756 0.162
slr0731 Reverse -263 -282 2.85105 0.293
slr0743 Forward -329 -310 4.62101 0.251
sll1324 Forward -300 -281 2.55606 0.293
ssr2972 Reverse -6 -25 1.96607 0.296
slr1773 Reverse -201 -220 1.96607 0.296
slr1779 Reverse -239 -258 5.50599 0.235
slr1079 Forward -205 -186 10.5209 0.161
sll1005 Reverse -324 -343 1.96607 0.296
smr0007 Reverse -63 -82 3.14605 0.288
smr0008 Reverse -215 -234 3.14605 0.288
slr2044 Reverse -246 -265 2.45773 0.294
slr2051 Reverse -148 -167 4.62101 0.251
slr2053 Reverse -242 -261 23.0089 0.0131
slr1917 Reverse -2 -21 1.76941 0.296
slr1028 Forward -94 -75 4.32602 0.252
slr1376 Reverse -18 -37 3.73603 0.279
ssl2542 Forward -90 -71 5.60432 0.235
sll1284 Reverse -119 -138 15.6341 0.0796
slr1703 Forward -243 -224 8.55425 0.19
slr1706 Forward -160 -141 6.68596 0.22
slr1706 Reverse -143 -162 2.45773 0.294
slr2012 Reverse -326 -345 1.86774 0.296
sll1806 Reverse -338 -357 4.42435 0.252
ssl3437 Reverse -69 -88 4.42435 0.252
sll1123 Reverse -337 -356 7.57094 0.197
sll1971 Forward -128 -109 3.14605 0.288
slr2070 Reverse -55 -74 3.14605 0.288
sll1713 Forward -179 -160 5.50599 0.235
slr1552 Reverse -178 -197 9.3409 0.162
slr1219 Forward -192 -173 4.916 0.247
slr1435 Forward -339 -320 7.17762 0.204
sll1276 Forward -247 -228 5.70265 0.235
sll0877 Reverse -139 -158 2.3594 0.295
slr1409 Reverse -321 -340 12.4875 0.144
slr1876 Reverse -115 -134 2.65439 0.293
slr1887 Forward -221 -202 5.99764 0.235
sll1708 Forward -372 -353 17.7974 0.0494
sll1702 Forward -228 -209 6.09597 0.233
slr0854 Forward -256 -237 9.53756 0.162
slr1259 Forward -282 -263 4.62101 0.251
slr2084 Reverse -167 -186 14.0608 0.105
sll1987 Forward -300 -281 3.14605 0.288
ssl2781 Forward -324 -305 2.26107 0.296
slr1508 Forward -115 -96 16.2241 0.0758
slr1332 Forward -95 -76 4.916 0.247
slr0823 Forward -359 -340 7.47261 0.197
sll1254 Reverse -250 -269 7.07928 0.204
ssl3573 Reverse -295 -314 6.4893 0.223
sll1172 Forward -358 -339 1.86774 0.296
slr1280 Reverse -359 -378 1.86774 0.296
sll1167 Forward -343 -324 2.0644 0.296
slr1287 Reverse -220 -239 2.0644 0.296
slr0943 Reverse -353 -372 7.57094 0.197
slr0959 Reverse -236 -255 3.44104 0.288
sll1528 Reverse -185 -204 9.24257 0.162
sll0426 Forward -197 -178 6.68596 0.22
slr0280 Forward -61 -42 9.93088 0.161
slr0402 Forward -374 -355 1.76941 0.296
sll0145 Forward -138 -119 1.96607 0.296
sll0171 Reverse -236 -255 9.93088 0.161
sll0166 Reverse -175 -194 11.5042 0.145
slr0366 Forward -116 -97 10.7175 0.161
slr0346 Reverse -318 -337 5.01433 0.247
sll0321 Forward -221 -202 2.65439 0.293
slr0213 Reverse -102 -121 6.39097 0.223
ssl0788 Reverse -65 -84 7.96426 0.191
sll0409 Reverse -322 -341 4.22769 0.255
sll0071 Reverse -153 -172 8.06259 0.191
slr0196 Reverse -112 -131 4.916 0.247
sll0550 Reverse -277 -296 7.7676 0.197
sll0544 Reverse -146 -165 7.96426 0.191
slr0572 Forward -268 -249 7.96426 0.191
slr0833 Reverse -169 -188 4.32602 0.252
slr0072 Forward -177 -158 2.3594 0.295
slr0086 Forward -283 -264 14.5524 0.102
sll0481 Reverse -166 -185 8.45592 0.19
sll0477 Forward -158 -139 2.55606 0.293
slr0513 Reverse -54 -73 2.55606 0.293
slr0624 Forward -326 -307 2.16274 0.296
sll0094 Forward -293 -274 5.01433 0.247
slr0116 Forward -278 -259 7.07928 0.204
slr0121 Reverse -124 -143 3.83436 0.276
slr0298 Reverse -377 -396 4.52268 0.252
slr0299 Reverse -108 -127 23.3039 0.0131
sll0800 Reverse -11 -30 3.53937 0.288
ssl1255 Forward -383 -364 1.76941 0.296
sll0033 Reverse -331 -350 2.65439 0.293
sll0522 Reverse -178 -197 10.0292 0.161
sll0630 Reverse -212 -231 4.03102 0.265
sll1470 Forward -349 -330 2.75272 0.293
slr0751 Forward -204 -185 12.0942 0.144
slr1658 Forward -79 -60 11.4058 0.145
sll5057 Reverse -200 -219 2.65439 0.293
sll7050 Reverse -187 -206 5.60432 0.235
slr7052 Forward -164 -145 5.60432 0.235
sll8004 Reverse -105 -124 2.75272 0.293
slr8021 Reverse -146 -165 4.916 0.247
sll8031 Reverse -128 -147 20.354 0.0231
slr6050 Forward -140 -121 5.211 0.247
6803t07 Forward -274 -255 3.34271 0.288
6803t31 Forward -124 -105 6.39097 0.223
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000
0.250 0.000 0.750 0.000
0.125 0.625 0.125 0.125
0.000 0.000 1.000 0.000
0.000 0.875 0.000 0.125
0.000 0.875 0.125 0.000
1.000 0.000 0.000 0.000
0.125 0.000 0.500 0.375
0.125 0.625 0.250 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.375 0.375 0.250 0.000
0.250 0.000 0.750 0.000
0.000 0.000 0.875 0.125
0.375 0.500 0.125 0.000
0.750 0.250 0.000 0.000
0.000 0.625 0.375 0.000
0.000 0.750 0.250 0.000