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Details for NP_442198.1_7

Name NP_442198.1_7
Length 20
Regular expression G[CG][CA][CGA][TG]C[CG]AT[TC][GT]C[ATC][CT][AT]G[GC]A[GA][GA]
Central No

Motif logo

Genes containing this motif

164 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Reverse -174 -193 8.4551 0.292
slr1312 Forward -77 -58 13.7649 0.185
slr1115 Forward -168 -149 18.5831 0.084
sll1060 Forward -249 -230 11.2084 0.209
ssl2069 Forward -62 -43 11.2084 0.209
ssr1853 Reverse -207 -226 11.2084 0.209
sll1054 Forward -283 -264 11.8967 0.206
sll0704 Reverse -70 -89 8.84842 0.286
slr0732 Forward -106 -87 8.84842 0.286
slr0741 Reverse -112 -131 13.0766 0.185
slr0238 Forward -128 -109 11.3067 0.209
slr0252 Forward -234 -215 9.43841 0.273
slr1094 Reverse -212 -231 7.66846 0.298
slr1099 Reverse -197 -216 16.8132 0.139
sll1031 Reverse -38 -57 7.76679 0.298
slr1793 Forward -362 -343 11.5033 0.209
sll1658 Reverse -92 -111 13.175 0.185
slr1799 Forward -54 -35 13.175 0.185
sll1196 Reverse -349 -368 12.1917 0.198
slr1306 Forward -147 -128 20.7464 0.055
sll1186 Reverse -226 -245 14.9449 0.173
sll1023 Forward -326 -307 9.63507 0.263
sll0647 Forward -337 -318 8.35677 0.296
slr0686 Reverse -219 -238 8.65176 0.291
sll0640 Reverse -40 -59 20.1564 0.055
slr0688 Forward -36 -17 20.1564 0.055
sll0634 Forward -232 -213 7.66846 0.298
slr0695 Reverse -74 -93 7.66846 0.298
slr1600 Forward -337 -318 14.3549 0.181
smr0005 Forward -168 -149 9.83173 0.253
slr1043 Reverse -302 -321 8.84842 0.286
ssr1736 Forward -190 -171 8.16011 0.298
slr1052 Reverse -201 -220 11.0117 0.219
slr1847 Forward -189 -170 12.3883 0.198
sll1751 Reverse -357 -376 13.5683 0.185
smr0007 Reverse -83 -102 10.7167 0.228
smr0008 Reverse -235 -254 10.7167 0.228
ssr3452 Reverse -235 -254 13.2733 0.185
slr2049 Reverse -371 -390 8.94676 0.286
slr2053 Forward -258 -239 12.88 0.185
sll1913 Reverse -118 -137 9.43841 0.273
slr1140 Reverse -269 -288 8.75009 0.288
ssl2084 Reverse -146 -165 8.16011 0.298
sll1825 Reverse -288 -307 8.16011 0.298
sll1824 Reverse -81 -100 11.405 0.209
sll1803 Reverse -91 -110 8.94676 0.286
sll1787 Reverse -170 -189 8.25844 0.298
sll1123 Forward -353 -334 13.175 0.185
sll1123 Forward -236 -217 11.2084 0.209
sll1725 Forward -169 -150 10.3234 0.248
sll1721 Reverse -350 -369 10.0284 0.248
slr1838 Forward -28 -9 10.0284 0.248
sll1469 Reverse -170 -189 7.76679 0.298
ssl2823 Forward -177 -158 12.29 0.198
slr1226 Reverse -218 -237 10.2251 0.248
slr1435 Reverse -323 -342 13.175 0.185
sll1356 Forward -235 -216 7.86512 0.298
slr1441 Reverse -201 -220 7.86512 0.298
slr1444 Forward -218 -199 12.7816 0.185
ssr2422 Forward -300 -281 12.0933 0.198
sll1274 Reverse -368 -387 8.4551 0.292
slr1365 Forward -41 -22 9.34008 0.273
sll0868 Reverse -279 -298 23.2047 0.0307
sll0868 Forward -285 -266 8.65176 0.291
sll0867 Reverse -285 -304 12.1917 0.198
sll0861 Forward -335 -316 9.83173 0.253
sll1304 Forward -186 -167 11.405 0.209
slr1857 Reverse -274 -293 7.76679 0.298
sll1768 Forward -220 -201 10.4217 0.248
slr1874 Reverse -277 -296 15.3382 0.173
slr1887 Reverse -205 -224 19.7631 0.0563
slr1887 Forward -93 -74 7.76679 0.298
slr2144 Reverse -348 -367 12.0933 0.198
slr2144 Reverse -336 -355 9.93006 0.249
sll1703 Reverse -228 -247 7.86512 0.298
slr1807 Forward -320 -301 7.86512 0.298
slr1734 Forward -399 -380 9.7334 0.256
sll1624 Reverse -256 -275 12.7816 0.185
sll0848 Forward -121 -102 11.2084 0.209
slr1255 Reverse -19 -38 9.34008 0.273
sll1615 Forward -246 -227 14.5516 0.175
sll1606 Forward -292 -273 7.66846 0.298
sll1599 Forward -242 -223 10.2251 0.248
slr2102 Forward -319 -300 11.8967 0.206
slr1521 Reverse -6 -25 14.0599 0.181
sll2001 Forward -143 -124 12.9783 0.185
ssr3570 Reverse -241 -260 12.9783 0.185
sll0818 Forward -185 -166 9.7334 0.256
ssl3573 Forward -311 -292 21.5331 0.055
sll1892 Reverse -286 -305 7.66846 0.298
slr1979 Forward -327 -308 11.7 0.209
sll1389 Forward -271 -252 14.5516 0.175
slr1277 Forward -159 -140 10.815 0.228
sll1104 Forward -80 -61 12.585 0.19
sll1099 Reverse -81 -100 8.75009 0.288
sll1096 Reverse -314 -333 7.96345 0.298
slr1174 Reverse -103 -122 11.3067 0.209
sll1559 Forward -214 -195 16.5182 0.139
slr1686 Reverse -77 -96 16.5182 0.139
slr0955 Forward -121 -102 14.7483 0.175
slr1622 Reverse -62 -81 8.55343 0.292
sll1527 Forward -289 -270 10.0284 0.248
slr1643 Reverse -73 -92 8.65176 0.291
slr1646 Forward -351 -332 8.94676 0.286
sll1522 Forward -249 -230 19.4681 0.0585
sll0267 Reverse -256 -275 7.76679 0.298
slr0286 Forward -192 -173 8.84842 0.286
ssl1807 Forward -87 -68 8.16011 0.298
sll0944 Reverse -238 -257 9.34008 0.273
slr0322 Forward -220 -201 7.86512 0.298
slr0171 Forward -182 -163 7.86512 0.298
slr0380 Reverse -176 -195 9.93006 0.249
slr0381 Forward -216 -197 14.1583 0.181
sll0753 Forward -149 -130 8.16011 0.298
slr0342 Reverse -288 -307 10.1267 0.248
slr0354 Forward -274 -255 8.25844 0.298
sll0019 Reverse -49 -68 8.4551 0.292
sll0006 Forward -362 -343 15.0432 0.173
slr0224 Forward -311 -292 14.1583 0.181
slr0055 Forward -367 -348 10.6184 0.234
slr0644 Forward -392 -373 13.2733 0.185
sll0395 Reverse -270 -289 8.94676 0.286
slr0416 Reverse -256 -275 8.06178 0.298
sll0383 Forward -291 -272 20.0581 0.055
ssr0693 Reverse -253 -272 8.75009 0.288
slr0915 Reverse -376 -395 15.2399 0.173
slr0918 Forward -332 -313 10.815 0.228
slr0920 Forward -398 -379 7.66846 0.298
sll0892 Forward -122 -103 14.9449 0.173
sll0545 Reverse -222 -241 7.86512 0.298
slr0581 Forward -196 -177 8.94676 0.286
sll0539 Forward -258 -239 8.84842 0.286
sll0086 Reverse -272 -291 9.93006 0.249
slr0108 Reverse -297 -316 8.4551 0.292
slr0108 Reverse -261 -280 7.76679 0.298
sll0780 Forward -383 -364 10.1267 0.248
sll0047 Reverse -212 -231 11.405 0.209
sll0033 Reverse -93 -112 12.1917 0.198
slr0527 Forward -245 -226 16.6165 0.139
sll0509 Reverse -200 -219 11.5033 0.209
sll0506 Reverse -108 -127 8.4551 0.292
sll1336 Forward -373 -354 8.94676 0.286
slr1452 Forward -248 -229 8.06178 0.298
slr0655 Reverse -285 -304 7.76679 0.298
slr1556 Reverse -224 -243 13.5683 0.185
sll1496 Reverse -165 -184 10.0284 0.248
slr1571 Reverse -112 -131 11.7983 0.206
slr1573 Forward -336 -317 7.66846 0.298
slr1665 Forward -291 -272 12.6833 0.188
ssr2786 Reverse -48 -67 8.35677 0.296
sll0436 Reverse -282 -301 10.3234 0.248
slr1178 Reverse -323 -342 12.88 0.185
sll0567 Reverse -295 -314 9.34008 0.273
sll0563 Reverse -250 -269 15.2399 0.173
slr0609 Forward -219 -200 11.7983 0.206
sll5002 Forward -323 -304 10.1267 0.248
slr5051 Forward -397 -378 8.84842 0.286
slr7016 Forward -262 -243 17.2065 0.139
ssl7039 Reverse -342 -361 11.11 0.214
ssl7042 Reverse -52 -71 8.55343 0.292
slr7097 Reverse -158 -177 10.0284 0.248
slr8022 Forward -210 -191 8.84842 0.286
sll8031 Forward -144 -125 8.35677 0.296
slr6097 Forward -218 -199 8.06178 0.298
6803t06 Forward -340 -321 9.14342 0.286
6803t13 Forward -188 -169 9.53674 0.27
6803t34 Reverse -321 -340 15.2399 0.173
6803t36 Reverse -186 -205 8.4551 0.292
6803t36 Reverse -150 -169 7.76679 0.298
6803t41 Reverse -371 -390 10.7167 0.228
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.909  0.091  
0.000 0.727 0.273 0.000
0.364 0.545 0.000 0.091
0.273 0.364 0.364 0.000
0.000 0.000 0.273 0.727
0.000 1.000 0.000 0.000
0.000 0.636 0.364 0.000
0.909 0.091 0.000 0.000
0.000 0.091 0.182 0.727
0.000 0.455 0.000 0.545
0.000 0.000 0.727 0.273
0.000 0.818 0.182 0.000
0.364 0.273 0.000 0.364
0.000 0.545 0.182 0.273
0.545 0.091 0.000 0.364
0.182 0.000 0.818 0.000
0.000 0.455 0.545 0.000
0.818 0.182 0.000 0.000
0.273 0.000 0.727 0.000
0.273 0.000 0.636 0.091