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Details for NP_442162.1_8

Name NP_442162.1_8
Length 20
Regular expression CC[CAGTA]GG[CA][AC][CT][CG]GT[GT]CGCCA[TC][GAC]G
Central No

Motif logo

Genes containing this motif

49 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Forward -324 -305 5.50599 0.187
slr1488 Reverse -282 -301 -2.85214 0.291
sll1399 Reverse -121 -140 0.491109 0.278
slr1495 Forward -257 -238 0.491109 0.278
slr1128 Reverse -366 -385 4.22769 0.187
slr0730 Reverse -343 -362 -2.85214 0.291
sll0216 Reverse -222 -241 -3.93378 0.291
sll1324 Forward -314 -295 3.24438 0.235
slr1099 Reverse -194 -213 4.12936 0.187
slr1102 Reverse -160 -179 0.884433 0.278
sll1196 Reverse -346 -365 -2.55715 0.291
sll0638 Reverse -366 -385 4.71934 0.187
slr1770 Forward -300 -281 -3.04881 0.291
slr2041 Reverse -336 -355 -3.83545 0.291
sll1939 Reverse -212 -231 -2.65548 0.291
slr1918 Forward -243 -224 4.12936 0.187
sll0984 Reverse -359 -378 4.03102 0.187
sll1289 Reverse -113 -132 -3.63879 0.291
slr1699 Forward -381 -362 -3.83545 0.291
sll1570 Forward -59 -40 1.96607 0.263
slr2011 Reverse -98 -117 -3.93378 0.291
slr2013 Reverse -290 -309 4.03102 0.187
sll1921 Forward -307 -288 -3.44213 0.291
sll1787 Reverse -167 -186 -3.24547 0.291
sll1724 Forward -159 -140 4.22769 0.187
slr1855 Forward -269 -250 1.67108 0.265
slr2079 Reverse -364 -383 2.0644 0.263
slr0812 Forward -332 -313 4.22769 0.187
slr1344 Reverse -105 -124 -3.83545 0.291
sll1370 Forward -368 -349 2.16274 0.263
slr1678 Forward -356 -337 -2.55715 0.291
sll1558 Forward -135 -116 -2.16383 0.291
slr0959 Forward -380 -361 1.86774 0.263
sll0266 Reverse -293 -312 0.294447 0.278
ssr3304 Reverse -227 -246 -3.83545 0.291
sll0350 Forward -78 -59 0.294447 0.278
sll0183 Forward -124 -105 -3.14714 0.291
slr0918 Forward -265 -246 2.55606 0.263
sll0550 Forward -167 -148 -3.73712 0.291
sll0107 Forward -26 -7 -3.14714 0.291
slr0103 Reverse -94 -113 -3.14714 0.291
slr0797 Reverse -142 -161 2.85105 0.254
sll0037 Forward -184 -165 4.71934 0.187
ssl0832 Reverse -361 -380 6.4893 0.187
slr0454 Forward -294 -275 6.4893 0.187
sll0564 Forward -52 -33 -0.39387 0.291
slr0599 Reverse -335 -354 -0.39387 0.291
slr6007 Forward -268 -249 -3.63879 0.291
slr6066 Forward -268 -249 -3.63879 0.291
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

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