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Details for NP_442135.1_8

Name NP_442135.1_8
Length 19
Regular expression CT[GC][CA]TG[CG]TA[GA][AC]G[GA]C[GA]AT[CG][GC]
Central No

Motif logo

Genes containing this motif

83 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll0558 Reverse -286 -304 11.7205 0.207
slr1315 Forward -153 -135 14.4738 0.207
slr1493 Reverse -350 -368 11.5239 0.207
slr0721 Forward -376 -358 10.0489 0.233
slr0734 Reverse -372 -390 13.5888 0.207
slr1107 Forward -233 -215 11.2289 0.207
sll1676 Forward -244 -226 9.45892 0.256
slr1787 Reverse -356 -374 9.45892 0.256
sll1198 Forward -73 -55 12.8022 0.207
sll1185 Forward -321 -303 11.5239 0.207
sll1184 Forward -242 -224 12.9988 0.207
sll0641 Reverse -175 -193 10.2456 0.23
slr1592 Reverse -349 -367 8.86894 0.284
sll1512 Forward -245 -227 9.95058 0.233
slr1598 Reverse -10 -28 9.95058 0.233
slr1609 Forward -353 -335 11.0322 0.207
sll1002 Forward -115 -97 9.85225 0.238
sll1643 Forward -151 -133 14.6705 0.207
slr1762 Reverse -93 -111 14.6705 0.207
ssr2962 Reverse -275 -293 11.8189 0.207
slr2053 Reverse -235 -253 13.5888 0.207
slr1911 Reverse -183 -201 11.5239 0.207
sll0981 Forward -55 -37 11.4255 0.207
sll0980 Reverse -72 -90 11.0322 0.207
slr1708 Forward -170 -152 11.4255 0.207
slr1134 Forward -55 -37 11.6222 0.207
sll1123 Forward -361 -343 8.67227 0.3
sll1747 Forward -280 -262 11.8189 0.207
slr1842 Forward -380 -362 9.16393 0.264
slr1746 Forward -197 -179 13.4905 0.207
sll0839 Reverse -319 -337 12.9988 0.207
slr0868 Forward -108 -90 9.95058 0.233
sll1155 Reverse -287 -305 11.2289 0.207
slr1248 Forward -21 -3 10.1472 0.233
ssr2087 Forward -208 -190 9.95058 0.233
slr1729 Reverse -369 -387 9.95058 0.233
sll0253 Reverse -378 -396 9.65558 0.246
sll0248 Forward -148 -130 11.3272 0.207
slr2084 Forward -20 -2 19.882 0.0735
slr2099 Reverse -154 -172 9.16393 0.264
slr2104 Forward -314 -296 10.7372 0.212
slr0813 Reverse -359 -377 9.26226 0.264
sll1876 Forward -380 -362 14.0805 0.207
slr1281 Reverse -37 -55 10.3439 0.23
sll1442 Forward -116 -98 11.5239 0.207
sll1528 Reverse -370 -388 11.8189 0.207
sll0418 Reverse -114 -132 13.5888 0.207
slr0446 Forward -394 -376 10.4422 0.229
sll0269 Forward -231 -213 13.9821 0.207
sll0263 Reverse -78 -96 12.6055 0.207
ssl0242 Forward -311 -293 19.9803 0.0735
slr1001 Forward -89 -71 19.9803 0.0735
ssr0256 Reverse -201 -219 19.9803 0.0735
slr0166 Reverse -376 -394 19.9803 0.0735
slr1935 Forward -243 -225 10.2456 0.23
slr0326 Reverse -195 -213 8.86894 0.284
sll0298 Reverse -158 -176 11.2289 0.207
slr0362 Reverse -372 -390 11.4255 0.207
sll0312 Reverse -230 -248 16.5388 0.207
sll0006 Forward -199 -181 24.1102 0.0293
slr0049 Reverse -361 -379 18.702 0.106
slr0070 Reverse -238 -256 9.75391 0.24
slr0496 Reverse -123 -141 9.75391 0.24
slr0643 Forward -280 -262 13.8838 0.207
ssl0353 Forward -188 -170 9.16393 0.264
sll0556 Reverse -331 -349 9.16393 0.264
slr0517 Reverse -118 -136 15.9488 0.207
slr0616 Forward -197 -179 11.6222 0.207
ssr1038 Forward -294 -276 11.0322 0.207
sll0584 Reverse -308 -326 10.2456 0.23
sll1498 Reverse -306 -324 10.9339 0.207
slr0585 Forward -311 -293 10.5406 0.225
slr5082 Reverse -4 -22 11.7205 0.207
slr5119 Reverse -4 -22 11.7205 0.207
ssr7018 Forward -387 -369 10.8356 0.207
ssr7018 Forward -314 -296 10.8356 0.207
ssr7018 Forward -242 -224 10.8356 0.207
ssr7018 Forward -170 -152 10.8356 0.207
ssr7018 Forward -98 -80 10.8356 0.207
ssr7018 Forward -29 -11 10.8356 0.207
ssl7019 Reverse -331 -349 10.8356 0.207
ssl7019 Reverse -257 -275 10.8356 0.207
ssl7019 Reverse -179 -197 10.8356 0.207
ssl7019 Reverse -105 -123 10.8356 0.207
ssl7019 Reverse -31 -49 10.8356 0.207
ssl7020 Reverse -332 -350 10.8356 0.207
ssl7020 Reverse -258 -276 10.8356 0.207
ssl7020 Reverse -185 -203 10.8356 0.207
ssl7020 Reverse -115 -133 10.8356 0.207
ssl7020 Reverse -42 -60 10.8356 0.207
ssl7021 Reverse -94 -112 10.8356 0.207
ssl7021 Reverse -26 -44 10.8356 0.207
slr7023 Forward -393 -375 10.8356 0.207
slr7081 Forward -171 -153 10.8356 0.207
ssr6048 Forward -207 -189 11.0322 0.207
slr6103 Reverse -148 -166 10.3439 0.23
6803t35 Reverse -35 -53 9.16393 0.264
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.143 0.000 0.143 0.714
0.143 0.286 0.571 0.000
0.286 0.429 0.143 0.143
0.143 0.000 0.000 0.857
0.000 0.000 1.000 0.000
0.143 0.429 0.429 0.000
0.143 0.000 0.143 0.714
0.857 0.143 0.000 0.000
0.286 0.143 0.571 0.000
0.714 0.286 0.000 0.000
0.000 0.000 0.857 0.143
0.429 0.000 0.571 0.000
0.000 0.857 0.000 0.143
0.286 0.000 0.714 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.714 0.286 0.000
0.000 0.429 0.571 0.000