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Details for NP_442090.1_2

Name NP_442090.1_2
Length 20
Regular expression TTTT[TG][GC][TA][AT]T[ACT]T[TAG][TC]A[AC]AAAAT
Central Yes

Motif logo

Genes containing this motif

173 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1203 Reverse -211 -230 8.54611 0.281
sll1202 Forward -128 -109 6.54077 0.281
sll1202 Reverse -81 -100 6.44528 0.282
sll1408 Reverse -372 -391 6.63627 0.281
sll1407 Reverse -15 -34 14.3711 0.197
slr1488 Reverse -75 -94 10.3605 0.243
slr1491 Reverse -12 -31 7.11373 0.281
sll1401 Forward -273 -254 15.135 0.172
sll1401 Reverse -84 -103 7.59119 0.281
sll1396 Reverse -67 -86 13.5117 0.214
slr1498 Forward -339 -320 13.5117 0.214
sll1062 Reverse -276 -295 6.73176 0.281
slr0242 Forward -260 -241 7.4002 0.281
sll0222 Forward -73 -54 11.0289 0.239
sll1322 Reverse -130 -149 5.58586 0.296
sll1681 Reverse -343 -362 6.92274 0.281
slr1789 Forward -379 -360 11.3154 0.239
sll1673 Forward -55 -36 7.49569 0.281
sll1672 Forward -30 -11 5.96782 0.292
sll1663 Reverse -193 -212 5.87233 0.296
sll1188 Reverse -288 -307 7.11373 0.281
slr0985 Reverse -370 -389 7.01823 0.281
slr1068 Reverse -140 -159 5.58586 0.296
slr1078 Forward -98 -79 16.9494 0.136
slr1078 Reverse -254 -273 7.68668 0.281
ssr2699 Reverse -178 -197 6.92274 0.281
sll1505 Reverse -146 -165 14.4666 0.197
slr1046 Forward -254 -235 10.4559 0.243
ssl1923 Reverse -369 -388 9.21455 0.281
ssl1922 Reverse -40 -59 9.21455 0.281
sll1641 Forward -95 -76 7.97315 0.281
ssr2962 Reverse -156 -175 8.35512 0.281
ssr2962 Reverse -63 -82 7.97315 0.281
slr1767 Reverse -377 -396 8.35512 0.281
slr1767 Reverse -284 -303 7.97315 0.281
slr1846 Reverse -161 -180 7.20922 0.281
slr1847 Reverse -10 -29 8.16414 0.281
slr2048 Reverse -19 -38 10.3605 0.243
sll1830 Reverse -93 -112 7.49569 0.281
sll1830 Forward -110 -91 6.15881 0.287
slr1919 Forward -54 -35 7.49569 0.281
slr1919 Reverse -37 -56 6.15881 0.287
ssl1911 Forward -99 -80 18.6683 0.119
ssl1911 Reverse -80 -99 5.39487 0.3
slr1019 Reverse -21 -40 18.6683 0.119
slr1019 Forward -40 -21 5.39487 0.3
sll1283 Forward -392 -373 7.20922 0.281
slr2025 Reverse -292 -311 7.30471 0.281
sll1082 Forward -49 -30 6.73176 0.281
sll1080 Reverse -33 -52 11.9838 0.22
slr1148 Reverse -68 -87 10.5514 0.243
sll1825 Forward -234 -215 12.1748 0.215
sll1823 Forward -315 -296 7.49569 0.281
slr1211 Reverse -105 -124 21.2465 0.0789
slr2078 Forward -327 -308 11.6018 0.23
sll1730 Reverse -159 -178 10.5514 0.243
slr1834 Forward -257 -238 10.5514 0.243
slr1541 Reverse -218 -237 10.7424 0.243
slr1751 Reverse -131 -150 7.49569 0.281
ssr2049 Forward -358 -339 18.5728 0.119
sll1127 Forward -113 -94 12.2703 0.214
slr1239 Reverse -88 -107 12.2703 0.214
sll1355 Forward -389 -370 6.73176 0.281
slr1442 Reverse -347 -366 6.73176 0.281
slr0886 Reverse -131 -150 5.58586 0.296
sll1768 Reverse -253 -272 7.01823 0.281
slr1882 Forward -106 -87 9.31004 0.281
slr1882 Reverse -288 -307 6.54077 0.281
slr1886 Reverse -230 -249 5.68135 0.296
sll2015 Forward -369 -350 6.92274 0.281
sll1699 Reverse -369 -388 6.2543 0.287
sll1698 Reverse -20 -39 6.2543 0.287
sll1689 Forward -240 -221 6.54077 0.281
slr1740 Forward -213 -194 6.15881 0.287
slr1746 Forward -169 -150 8.35512 0.281
slr0861 Forward -196 -177 11.8883 0.22
slr0870 Reverse -92 -111 5.77684 0.296
sll1164 Forward -341 -322 9.97848 0.264
sll1957 Reverse -234 -253 5.68135 0.296
slr2057 Forward -138 -119 5.68135 0.296
ssl3692 Forward -217 -198 9.7875 0.277
sll1902 Forward -77 -58 6.82725 0.281
ssr3402 Reverse -277 -296 6.82725 0.281
sll1608 Reverse -241 -260 7.97315 0.281
slr2088 Forward -238 -219 6.15881 0.287
sll1428 Forward -70 -51 6.82725 0.281
sll1428 Reverse -161 -180 5.49036 0.296
slr1503 Reverse -326 -345 6.82725 0.281
slr1503 Forward -235 -216 5.49036 0.296
slr2117 Forward -57 -38 22.2969 0.0789
slr2117 Reverse -40 -59 12.8432 0.214
sll1240 Reverse -321 -340 13.1297 0.214
sll1240 Forward -207 -188 6.54077 0.281
sll1226 Forward -174 -155 7.4002 0.281
sll1226 Forward -204 -185 6.06331 0.287
sll1220 Forward -324 -305 9.69201 0.281
sll1219 Reverse -360 -379 10.265 0.243
slr1339 Reverse -281 -300 7.01823 0.281
sll1250 Forward -93 -74 11.1244 0.239
sll1250 Forward -49 -30 7.78217 0.281
slr1956 Reverse -171 -190 5.68135 0.296
slr1957 Forward -105 -86 8.45061 0.281
sll1893 Forward -24 -5 6.54077 0.281
sll1872 Reverse -170 -189 7.49569 0.281
sll1376 Forward -104 -85 6.15881 0.287
sll1441 Forward -121 -102 7.68668 0.281
slr1163 Forward -196 -177 7.30471 0.281
slr1171 Reverse -63 -82 7.97315 0.281
sll1561 Forward -292 -273 7.87766 0.281
sll1561 Forward -311 -292 7.59119 0.281
sll1561 Forward -312 -293 6.06331 0.287
slr1681 Reverse -58 -77 7.87766 0.281
slr1681 Reverse -39 -58 7.59119 0.281
slr1681 Reverse -38 -57 6.06331 0.287
slr0950 Forward -92 -73 10.265 0.243
sll0905 Forward -164 -145 5.68135 0.296
slr1629 Reverse -4 -23 6.44528 0.282
ssl2971 Forward -49 -30 12.4613 0.214
ssr0759 Reverse -109 -128 5.58586 0.296
slr0286 Reverse -10 -29 7.11373 0.281
sll0260 Forward -22 -3 8.73709 0.281
ssr0482 Reverse -268 -287 8.73709 0.281
sll0360 Forward -44 -25 8.35512 0.281
slr0402 Forward -50 -31 6.06331 0.287
slr0142 Reverse -143 -162 7.68668 0.281
sll0147 Forward -229 -210 7.87766 0.281
slr1001 Forward -321 -302 6.92274 0.281
slr0166 Reverse -144 -163 6.92274 0.281
sll1852 Reverse -17 -36 6.54077 0.281
ssl1807 Reverse -181 -200 7.01823 0.281
sll0161 Reverse -144 -163 6.92274 0.281
ssl0296 Reverse -342 -361 12.2703 0.214
ssl0296 Forward -360 -341 10.3605 0.243
ssl0296 Reverse -344 -363 7.68668 0.281
slr0181 Forward -92 -73 12.2703 0.214
slr0181 Reverse -74 -93 10.3605 0.243
slr0181 Forward -90 -71 7.68668 0.281
sll0335 Reverse -183 -202 12.3658 0.214
slr0373 Forward -97 -78 12.3658 0.214
sll0771 Reverse -173 -192 15.899 0.14
slr0774 Forward -125 -106 15.899 0.14
sll0318 Forward -313 -294 16.4719 0.136
sll0315 Reverse -230 -249 7.01823 0.281
slr0015 Forward -263 -244 16.4719 0.136
ssl0020 Reverse -5 -24 7.30471 0.281
sll0010 Reverse -261 -280 7.01823 0.281
slr0019 Forward -201 -182 7.01823 0.281
sll0008 Forward -58 -39 11.2199 0.239
sll0202 Forward -307 -288 8.25963 0.281
sll0405 Reverse -348 -367 5.39487 0.3
sll0401 Reverse -38 -57 7.4002 0.281
sll0383 Reverse -18 -37 7.78217 0.281
slr0423 Forward -274 -255 8.92807 0.281
sll0182 Reverse -207 -226 8.25963 0.281
ssr0330 Reverse -331 -350 7.30471 0.281
slr0897 Reverse -345 -364 5.96782 0.292
slr0905 Reverse -117 -136 9.59652 0.281
slr0913 Forward -55 -36 14.0846 0.206
slr0913 Forward -56 -37 6.82725 0.281
slr0915 Reverse -332 -351 7.4002 0.281
ssl1046 Forward -187 -168 11.7928 0.22
slr0573 Reverse -10 -29 11.7928 0.22
slr0579 Reverse -287 -306 5.49036 0.296
sll0821 Reverse -276 -295 11.2199 0.239
slr0847 Forward -173 -154 11.2199 0.239
sll0078 Reverse -305 -324 13.3207 0.214
slr0522 Reverse -366 -385 7.59119 0.281
slr0617 Forward -397 -378 5.77684 0.296
sll0588 Reverse -3 -22 6.82725 0.281
sll0109 Forward -138 -119 7.4002 0.281
slr0626 Reverse -60 -79 7.4002 0.281
sll0098 Forward -302 -283 6.44528 0.282
sll0281 Forward -110 -91 9.21455 0.281
sll0776 Reverse -9 -28 5.58586 0.296
slr0700 Reverse -182 -201 9.50102 0.281
sll0672 Forward -246 -227 6.06331 0.287
sll0666 Reverse -260 -279 16.4719 0.136
slr0530 Reverse -134 -153 7.20922 0.281
sll0900 Reverse -335 -354 5.49036 0.296
slr1420 Reverse -33 -52 9.31004 0.281
sll1329 Reverse -28 -47 9.11906 0.281
sll1367 Reverse -135 -154 5.77684 0.296
slr1452 Forward -94 -75 5.77684 0.296
slr1463 Forward -35 -16 5.87233 0.296
slr0753 Forward -56 -37 6.06331 0.287
sll1552 Reverse -21 -40 5.58586 0.296
sll1549 Forward -204 -185 12.6523 0.214
slr1655 Reverse -301 -320 12.6523 0.214
slr1658 Reverse -24 -43 5.49036 0.296
slr0458 Reverse -22 -41 7.59119 0.281
slr0458 Reverse -108 -127 6.54077 0.281
sll0578 Reverse -201 -220 6.15881 0.287
ssl5039 Forward -274 -255 16.4719 0.136
slr5053 Forward -260 -241 8.73709 0.281
sll7085 Reverse -238 -257 12.4613 0.214
slr7102 Reverse -166 -185 5.49036 0.296
6803t25 Reverse -48 -67 6.06331 0.287
6803t26 Forward -208 -189 6.54077 0.281
6803t34 Reverse -277 -296 7.4002 0.281
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.111  0.889  
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.111 0.000 0.889
0.000 0.000 0.444 0.556
0.111 0.333 0.556 0.000
0.222 0.000 0.000 0.778
0.444 0.111 0.111 0.333
0.000 0.111 0.000 0.889
0.444 0.333 0.000 0.222
0.111 0.111 0.111 0.667
0.222 0.111 0.222 0.444
0.111 0.222 0.000 0.667
0.889 0.000 0.111 0.000
0.556 0.444 0.000 0.000
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000
1.000 0.000 0.000 0.000
0.889 0.000 0.000 0.111
0.111 0.000 0.000 0.889