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Details for NP_442073.1_6

Name NP_442073.1_6
Length 20
Regular expression TA[CT]TG[AC]CGGCG[GC]GA[GT]CGCCA
Central No

Motif logo

Genes containing this motif

135 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1490 Forward -244 -225 -3.44213 0.291
sll1041 Forward -98 -79 -0.000545616 0.255
sll1035 Reverse -252 -271 3.93269 0.25
sll1196 Forward -370 -351 0.58944 0.25
sll0932 Forward -299 -280 8.55425 0.193
slr1083 Reverse -329 -348 -2.75381 0.291
sll1024 Forward -236 -217 -2.26216 0.286
sll1020 Forward -210 -191 -1.37718 0.271
sll1640 Reverse -298 -317 -3.3438 0.291
smr0007 Forward -52 -33 0.392778 0.25
smr0008 Forward -204 -185 0.392778 0.25
sll1830 Reverse -203 -222 0.786102 0.25
slr1920 Forward -162 -143 8.75091 0.193
ssl2542 Forward -280 -261 -2.65548 0.291
slr1397 Forward -74 -55 -3.54046 0.291
ssr2843 Reverse -374 -393 -3.54046 0.291
sll1921 Forward -382 -363 0.294447 0.25
slr2023 Reverse -248 -267 1.47442 0.25
slr2026 Reverse -310 -329 -0.787193 0.269
sll1913 Forward -139 -120 -2.75381 0.291
slr1134 Reverse -26 -45 -3.3438 0.291
slr1139 Reverse -258 -277 -0.787193 0.269
sll1817 Forward -171 -152 -2.26216 0.286
sll1805 Forward -370 -351 1.47442 0.25
sll1791 Forward -354 -335 -3.54046 0.291
slr1205 Forward -252 -233 -1.7705 0.283
sll1745 Forward -81 -62 0.786102 0.25
sll1725 Reverse -148 -167 1.37609 0.25
slr1842 Forward -115 -96 -2.16383 0.286
slr1535 Reverse -282 -301 -1.27885 0.271
slr1549 Reverse -261 -280 1.17943 0.25
sll1452 Reverse -243 -262 0.982764 0.25
sll1450 Forward -193 -174 -1.96717 0.286
slr1752 Forward -258 -239 -0.688862 0.269
slr1218 Forward -366 -347 -2.45882 0.286
sll0861 Reverse -314 -333 -1.18052 0.271
slr1862 Forward -287 -268 1.96607 0.25
sll1775 Reverse -372 -391 -0.295539 0.269
ssl3383 Forward -357 -338 2.85105 0.25
ssl3382 Forward -135 -116 2.85105 0.25
slr1875 Forward -110 -91 -2.45882 0.286
ssl3379 Reverse -260 -279 -2.36049 0.286
sll1757 Reverse -229 -248 -1.08219 0.271
ssl3291 Reverse -329 -348 -3.04881 0.291
sll1695 Reverse -191 -210 -3.3438 0.291
slr1735 Reverse -82 -101 1.86774 0.25
sll1624 Forward -277 -258 20.354 0.0277
slr1746 Forward -195 -176 -0.4922 0.269
sll0846 Forward -154 -135 7.66927 0.193
slr0862 Reverse -36 -55 7.66927 0.193
slr1243 Reverse -308 -327 -0.885524 0.271
sll1156 Forward -273 -254 -3.54046 0.291
slr1256 Reverse -348 -367 -0.590531 0.269
slr1259 Forward -314 -295 1.37609 0.25
slr1260 Forward -181 -162 3.04771 0.25
ssr3383 Reverse -257 -276 -1.57384 0.281
sll1615 Forward -252 -233 -0.787193 0.269
slr1719 Forward -331 -312 0.392778 0.25
slr1724 Forward -280 -261 -2.16383 0.286
slr0269 Reverse -304 -323 5.11266 0.25
sll0236 Reverse -94 -113 2.85105 0.25
sll0236 Forward -266 -247 -0.787193 0.269
sll1980 Reverse -339 -358 1.47442 0.25
sll1979 Forward -302 -283 8.75091 0.193
slr1519 Reverse -265 -284 -2.0655 0.286
sll2001 Forward -34 -15 1.67108 0.25
ssr3570 Reverse -350 -369 1.67108 0.25
slr1330 Forward -193 -174 -3.63879 0.291
slr1344 Forward -303 -284 -2.36049 0.286
slr1979 Reverse -36 -55 0.196116 0.25
sll1871 Reverse -363 -382 1.47442 0.25
ssl2717 Forward -94 -75 -0.4922 0.269
sll1173 Reverse -316 -335 -0.885524 0.271
ssl2162 Reverse -219 -238 -3.3438 0.291
slr1678 Reverse -332 -351 -3.63879 0.291
sll1557 Forward -330 -311 -1.7705 0.283
slr1689 Reverse -38 -57 -0.000545616 0.255
slr0945 Forward -359 -340 9.14423 0.193
slr0945 Reverse -332 -351 0.884433 0.25
ssr2754 Reverse -198 -217 0.58944 0.25
sll0270 Reverse -328 -347 -1.27885 0.271
sll0268 Reverse -157 -176 1.27776 0.25
sll0364 Forward -258 -239 -3.3438 0.291
sll0145 Forward -287 -268 -1.37718 0.271
slr0162 Forward -335 -316 -0.787193 0.269
sll1848 Reverse -378 -397 1.17943 0.25
sll1848 Forward -374 -355 -1.27885 0.271
slr1951 Reverse -330 -349 0.196116 0.25
slr0325 Forward -264 -245 6.19431 0.25
sll0177 Forward -248 -229 0.884433 0.25
slr0387 Reverse -116 -135 -3.24547 0.291
slr0388 Forward -94 -75 2.16274 0.25
sll0764 Forward -298 -279 2.16274 0.25
slr0350 Forward -342 -323 -0.787193 0.269
sll0192 Forward -269 -250 -1.18052 0.271
sll0412 Reverse -209 -228 3.83436 0.25
slr0070 Reverse -300 -319 -2.85214 0.291
slr0633 Reverse -189 -208 -1.96717 0.286
slr0211 Reverse -233 -252 -2.45882 0.286
sll0892 Forward -87 -68 -0.4922 0.269
slr0833 Forward -160 -141 -1.18052 0.271
sll0086 Forward -289 -270 -1.57384 0.281
sll0078 Forward -360 -341 0.0977854 0.255
slr0086 Reverse -255 -274 -3.54046 0.291
slr0093 Reverse -295 -314 -3.14714 0.291
slr0095 Reverse -302 -321 9.53756 0.193
slr0520 Reverse -149 -168 0.196116 0.25
sll0593 Reverse -206 -225 -1.7705 0.283
slr0626 Reverse -374 -393 -1.08219 0.271
slr0110 Forward -279 -260 -2.75381 0.291
slr0316 Reverse -105 -124 -3.63879 0.291
slr0790 Reverse -215 -234 10.4225 0.193
sll0790 Forward -339 -320 -2.95047 0.291
sll0666 Reverse -30 -49 -2.16383 0.286
sll0043 Reverse -269 -288 5.01433 0.25
slr0031 Reverse -297 -316 0.294447 0.25
sll0033 Reverse -320 -339 -2.45882 0.286
slr0527 Reverse -224 -243 -1.7705 0.283
sll0505 Reverse -229 -248 -2.55715 0.29
slr0925 Reverse -160 -179 -2.36049 0.286
slr0557 Reverse -274 -293 -2.0655 0.286
slr1570 Forward -394 -375 1.47442 0.25
sll1486 Reverse -150 -169 -3.54046 0.291
sll1483 Forward -175 -156 1.0811 0.25
slr0755 Reverse -189 -208 8.35759 0.193
slr1665 Forward -307 -288 1.57275 0.25
slr0457 Reverse -354 -373 -1.27885 0.271
sll5002 Reverse -302 -321 0.294447 0.25
sll7070 Reverse -321 -340 0.294447 0.25
slr8036 Reverse -93 -112 7.7676 0.193
slr6008 Forward -203 -184 1.17943 0.25
slr6041 Forward -339 -320 -2.95047 0.291
slr6042 Forward -184 -165 -0.787193 0.269
slr6067 Forward -203 -184 1.17943 0.25
ssl6092 Reverse -49 -68 -3.24547 0.291
6803t03 Forward -250 -231 0.687771 0.25
6803t04 Forward -209 -190 1.57275 0.25
6803t16 Reverse -75 -94 1.67108 0.25
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.167  0.000  0.833  
0.833 0.000 0.000 0.167
0.000 0.667 0.000 0.333
0.000 0.000 0.167 0.833
0.000 0.000 1.000 0.000
0.667 0.333 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.167 0.167 0.500 0.167
0.000 1.000 0.000 0.000
0.000 0.000 0.833 0.167
0.000 0.333 0.500 0.167
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.167 0.000 0.500 0.333
0.000 0.833 0.167 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000