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Details for NP_442063.1_2

Name NP_442063.1_2
Length 20
Regular expression CTTCTT[CT]GG[CTA]CA[CT]AT[CT]TGGC
Central No

Motif logo

Genes containing this motif

17 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1400 Reverse -68 -87 -1.86883 0.232
sll1325 Reverse -215 -234 -2.0655 0.234
slr1594 Forward -53 -34 6.4893 0.0795
sll1940 Reverse -115 -134 5.30933 0.0961
sll1965 Forward -246 -227 -2.65548 0.292
slr2076 Reverse -285 -304 -2.65548 0.292
sll1143 Reverse -270 -289 -1.7705 0.232
sll0141 Forward -263 -244 6.4893 0.0795
slr0161 Reverse -131 -150 6.4893 0.0795
slr1931 Forward -125 -106 6.98095 0.0795
sll0163 Reverse -364 -383 6.09597 0.0795
sll0586 Forward -262 -243 6.19431 0.0795
slr0623 Reverse -102 -121 6.19431 0.0795
sll0286 Reverse -181 -200 -2.65548 0.292
sll0572 Reverse -322 -341 -1.27885 0.171
ssr7018 Reverse -120 -139 -2.0655 0.234
sll8004 Reverse -327 -346 6.78429 0.0795
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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