Your browser is old and dusty. Try Google Chrome!

Details for NP_442047.1_2

Name NP_442047.1_2
Length 15
Regular expression CCC[AT]G[GT][TC]GAATG[TG]G[CT]
Central No

Motif logo

Genes containing this motif

94 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1401 Reverse -339 -353 13.3726 0.224
sll1398 Forward -298 -284 13.2743 0.224
sll1396 Forward -258 -244 17.9942 0.161
slr1498 Reverse -148 -162 17.9942 0.161
sll0700 Reverse -179 -193 15.4376 0.161
slr0740 Forward -221 -207 11.7993 0.297
sll1326 Forward -117 -103 11.6026 0.297
slr1784 Reverse -326 -340 13.8643 0.203
slr1301 Reverse -338 -352 12.9793 0.24
sll0651 Reverse -179 -193 15.4376 0.161
sll1516 Forward -149 -135 16.0275 0.161
slr1596 Reverse -240 -254 16.0275 0.161
slr1759 Forward -204 -190 12.4876 0.267
sll1635 Forward -280 -266 13.0776 0.24
smr0006 Reverse -80 -94 11.6026 0.297
smr0007 Reverse -224 -238 11.6026 0.297
smr0008 Reverse -376 -390 11.6026 0.297
sll1930 Reverse -179 -193 15.4376 0.161
sll1293 Reverse -106 -120 15.9292 0.161
sll1571 Forward -276 -262 18.8791 0.161
sll1823 Forward -189 -175 17.6008 0.161
sll1123 Reverse -202 -216 12.586 0.256
sll1967 Forward -290 -276 15.4376 0.161
slr2072 Reverse -73 -87 15.4376 0.161
sll1744 Reverse -360 -374 16.0275 0.161
slr1536 Reverse -149 -163 14.4542 0.19
sll1468 Reverse -99 -113 16.6175 0.161
ssr2595 Forward -240 -226 16.6175 0.161
slr1364 Forward -69 -55 11.7993 0.297
slr0879 Forward -149 -135 11.701 0.297
slr1854 Reverse -185 -199 13.3726 0.224
sll1772 Forward -322 -308 16.4209 0.161
slr1822 Forward -321 -307 17.6008 0.161
slr0857 Reverse -179 -193 15.4376 0.161
sll1611 Forward -384 -370 15.4376 0.161
slr1716 Reverse -179 -193 15.4376 0.161
sll1609 Forward -284 -270 13.2743 0.224
sll1601 Forward -269 -255 11.701 0.297
slr0260 Forward -257 -243 14.3559 0.19
sll1987 Reverse -268 -282 14.3559 0.19
sll1984 Reverse -179 -193 15.4376 0.161
ssr3571 Forward -121 -107 14.7492 0.19
slr2113 Reverse -179 -193 15.4376 0.161
slr0804 Forward -155 -141 14.3559 0.19
sll1257 Reverse -179 -193 15.4376 0.161
slr1468 Forward -396 -382 11.7993 0.297
sll1167 Forward -230 -216 14.3559 0.19
slr1287 Reverse -333 -347 14.3559 0.19
sll1444 Forward -337 -323 14.9459 0.186
sll1437 Reverse -179 -193 15.4376 0.161
slr1673 Reverse -258 -272 15.4376 0.161
ssr2806 Forward -78 -64 14.7492 0.19
slr0943 Reverse -236 -250 11.7993 0.297
sll0912 Forward -19 -5 13.8643 0.203
slr0949 Reverse -267 -281 13.8643 0.203
slr0960 Forward -270 -256 12.6843 0.251
slr0291 Forward -153 -139 11.6026 0.297
ssr0657 Reverse -202 -216 13.8643 0.203
sll1858 Forward -373 -359 13.7659 0.211
sll1851 Forward -277 -263 15.4376 0.161
slr1937 Reverse -179 -193 15.4376 0.161
ssr3300 Reverse -92 -106 12.6843 0.251
slr0989 Forward -190 -176 20.5508 0.161
slr0993 Reverse -367 -381 12.7826 0.251
slr0171 Forward -267 -253 12.8809 0.247
sll0771 Forward -386 -372 17.6008 0.161
sll0317 Forward -314 -300 15.4376 0.161
sll0201 Reverse -179 -193 15.4376 0.161
slr0064 Reverse -127 -141 11.7993 0.297
slr0488 Reverse -365 -379 16.6175 0.161
sll0371 Forward -220 -206 18.8791 0.161
slr0580 Reverse -310 -324 14.6509 0.19
slr0513 Reverse -251 -265 14.3559 0.19
sll0286 Reverse -111 -125 17.9942 0.161
slr0698 Forward -60 -46 13.8643 0.203
slr0703 Reverse -166 -180 15.4376 0.161
sll0738 Forward -134 -120 14.4542 0.19
slr0526 Forward -239 -225 13.3726 0.224
sll0621 Reverse -58 -72 16.3225 0.161
ssr1114 Forward -227 -213 16.3225 0.161
sll1499 Forward -42 -28 16.3225 0.161
slr1583 Forward -249 -235 14.4542 0.19
sll1544 Reverse -245 -259 14.9459 0.186
ssr0817 Forward -240 -226 15.4376 0.161
sll5084 Reverse -71 -85 20.1574 0.161
sll7103 Forward -323 -309 15.4376 0.161
slr7105 Reverse -179 -193 15.4376 0.161
ssl8010 Forward -201 -187 12.1926 0.288
sll8042 Reverse -179 -193 15.4376 0.161
slr8044 Forward -250 -236 15.4376 0.161
slr8046 Reverse -179 -193 15.4376 0.161
6803t02 Forward -176 -162 17.3058 0.161
6803t07 Reverse -274 -288 11.7993 0.297
6803t12 Forward -301 -287 17.5025 0.161
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.857  0.000  0.143  
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.571 0.000 0.000 0.429
0.000 0.000 1.000 0.000
0.000 0.000 0.571 0.429
0.000 0.286 0.000 0.714
0.143 0.000 0.714 0.143
0.571 0.143 0.143 0.143
0.857 0.143 0.000 0.000
0.000 0.000 0.143 0.857
0.000 0.143 0.714 0.143
0.000 0.000 0.286 0.714
0.000 0.143 0.857 0.000
0.000 0.714 0.000 0.286