Your browser is old and dusty. Try Google Chrome!

Details for NP_442039.1_10

Name NP_442039.1_10
Length 19
Regular expression [TC][CT][ACGTC]T[CG][CT][CT]C[AC]A[AG][AT][CT][AT][AG]C[CA]C[CT]
Central No

Motif logo

Genes containing this motif

96 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1317 Reverse -372 -390 10.1465 0.293
sll0716 Forward -327 -309 13.1947 0.227
slr0728 Reverse -184 -202 13.883 0.227
sll1653 Forward -76 -58 10.9331 0.293
sll0926 Reverse -257 -275 14.6697 0.227
sll0640 Forward -298 -280 15.063 0.227
smr0005 Forward -80 -62 12.8997 0.232
slr1601 Forward -315 -297 12.8997 0.232
slr1044 Reverse -342 -360 17.4229 0.209
slr2032 Reverse -350 -368 14.6697 0.227
ssr3451 Forward -132 -114 16.2429 0.219
slr1906 Forward -355 -337 11.1298 0.289
slr1918 Reverse -252 -270 18.4062 0.209
slr1025 Forward -189 -171 18.1112 0.209
slr1704 Reverse -152 -170 13.3914 0.227
slr2018 Forward -274 -256 12.1131 0.251
slr1895 Reverse -195 -213 12.3097 0.251
slr1205 Forward -61 -43 15.4563 0.227
sll1968 Forward -25 -7 13.1947 0.227
slr1224 Forward -67 -49 15.358 0.227
sll1362 Forward -27 -9 10.0481 0.293
ssr2406 Reverse -167 -185 10.0481 0.293
slr1450 Forward -206 -188 10.7364 0.293
sll1693 Forward -367 -349 18.8979 0.209
slr1732 Forward -128 -110 11.5231 0.284
sll0838 Reverse -219 -237 13.6864 0.227
sll1905 Forward -104 -86 10.4414 0.293
sll1605 Reverse -235 -253 12.2114 0.251
slr1718 Forward -28 -10 12.2114 0.251
sll0244 Forward -328 -310 14.2763 0.227
slr2092 Forward -287 -269 14.3747 0.227
ssr2194 Forward -267 -249 13.0964 0.227
sll1233 Forward -329 -311 13.7847 0.227
sll0819 Reverse -247 -265 12.1131 0.251
slr1351 Reverse -299 -317 10.7364 0.293
sll1182 Forward -306 -288 13.293 0.227
slr1267 Reverse -34 -52 11.2281 0.289
slr1272 Reverse -102 -120 10.7364 0.293
sll1174 Forward -333 -315 12.2114 0.251
sll1098 Reverse -130 -148 10.1465 0.293
slr1004 Forward -220 -202 10.3431 0.293
slr0935 Reverse -64 -82 10.3431 0.293
sll1528 Forward -57 -39 10.5398 0.293
ssl2971 Reverse -3 -21 13.6864 0.227
ssl2971 Reverse -79 -97 10.0481 0.293
sll0359 Reverse -194 -212 16.4396 0.218
slr0397 Forward -140 -122 16.4396 0.218
sll0141 Reverse -215 -233 10.0481 0.293
slr0161 Forward -179 -161 10.0481 0.293
sll1864 Forward -48 -30 11.9164 0.265
sll1854 Forward -134 -116 13.0964 0.227
sll0947 Reverse -311 -329 12.3097 0.251
slr0994 Forward -136 -118 12.3097 0.251
slr0169 Reverse -48 -66 10.6381 0.293
sll0350 Reverse -161 -179 10.4414 0.293
slr0363 Forward -300 -282 10.4414 0.293
slr0369 Forward -154 -136 15.7513 0.227
slr0373 Reverse -328 -346 13.0964 0.227
slr0387 Forward -384 -366 17.4229 0.209
sll0022 Forward -162 -144 14.178 0.227
slr0001 Reverse -61 -79 14.178 0.227
sll0017 Forward -313 -295 17.0296 0.209
sll0208 Forward -273 -255 15.8496 0.227
ssl0788 Reverse -99 -117 10.0481 0.293
sll0408 Forward -113 -95 14.9646 0.227
sll0067 Forward -249 -231 11.7197 0.279
slr0067 Reverse -242 -260 10.1465 0.293
sll0397 Reverse -155 -173 11.2281 0.289
sll0394 Forward -285 -267 10.1465 0.293
slr0420 Reverse -50 -68 11.0314 0.293
slr0191 Forward -359 -341 10.6381 0.293
sll0891 Reverse -353 -371 10.2448 0.293
ssl1690 Reverse -97 -115 10.2448 0.293
slr0921 Forward -286 -268 10.2448 0.293
slr0075 Reverse -260 -278 10.6381 0.293
sll0085 Reverse -370 -388 14.5713 0.227
slr0083 Forward -365 -347 11.3264 0.289
sll0594 Forward -341 -323 17.8162 0.209
slr0624 Reverse -190 -208 14.8663 0.227
slr0797 Reverse -178 -196 11.1298 0.289
sll0737 Reverse -42 -60 12.1131 0.251
slr0530 Reverse -140 -158 10.6381 0.293
slr0534 Forward -40 -22 11.5231 0.284
sll1365 Forward -286 -268 10.3431 0.293
slr1566 Reverse -91 -109 12.8014 0.236
sll1543 Reverse -139 -157 13.588 0.227
slr1667 Forward -302 -284 13.588 0.227
slr0593 Forward -190 -172 11.1298 0.289
slr0600 Forward -252 -234 11.3264 0.289
sll5063 Reverse -145 -163 13.7847 0.227
slr5078 Reverse -236 -254 14.473 0.227
sll5084 Reverse -299 -317 18.0129 0.209
ssl5129 Reverse -123 -141 10.1465 0.293
ssl7021 Reverse -153 -171 16.9313 0.209
slr7023 Forward -334 -316 16.9313 0.209
slr7060 Reverse -379 -397 11.5231 0.284
6803t16 Forward -127 -109 10.2448 0.293
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.333  0.000  0.667  
0.000 0.778 0.000 0.222
0.333 0.222 0.222 0.222
0.000 0.111 0.000 0.889
0.000 0.556 0.333 0.111
0.000 0.778 0.000 0.222
0.000 0.667 0.000 0.333
0.000 1.000 0.000 0.000
0.667 0.333 0.000 0.000
0.889 0.000 0.111 0.000
0.556 0.000 0.333 0.111
0.556 0.000 0.000 0.444
0.111 0.556 0.000 0.333
0.667 0.000 0.000 0.333
0.778 0.000 0.222 0.000
0.111 0.778 0.000 0.111
0.222 0.667 0.111 0.000
0.000 1.000 0.000 0.000
0.000 0.778 0.000 0.222