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Details for NP_442029.1_10

Name NP_442029.1_10
Length 20
Regular expression [CT]T[GCT][TG][CG][CA]C[CA][GCT]C[CA][GCT][CTG]T[GT][GC][CG][GC]G[CG]
Central No

Motif logo

Genes containing this motif

294 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1492 Forward -320 -301 10.9142 0.194
sll1398 Reverse -380 -399 15.2408 0.145
sll1398 Forward -253 -234 9.83255 0.22
sll1054 Reverse -258 -277 4.42435 0.292
sll1052 Reverse -376 -395 5.50599 0.284
slr1129 Reverse -188 -207 5.01433 0.29
sll0708 Forward -309 -290 11.7992 0.178
slr0729 Reverse -192 -211 7.37428 0.264
slr0731 Forward -27 -8 8.65258 0.25
slr0732 Reverse -372 -391 6.68596 0.284
sll0703 Forward -307 -288 6.78429 0.284
sll0220 Reverse -380 -399 5.30933 0.287
sll1324 Reverse -296 -315 7.17762 0.273
slr1100 Reverse -105 -124 4.22769 0.293
slr1105 Reverse -122 -141 8.45592 0.25
sll1036 Forward -76 -57 4.22769 0.293
slr1110 Reverse -259 -278 4.81767 0.29
sll1682 Forward -231 -212 17.699 0.119
sll1681 Reverse -156 -175 12.6841 0.158
sll1671 Reverse -319 -338 5.11266 0.287
slr1790 Forward -23 -4 5.11266 0.287
ssr2998 Reverse -59 -78 5.89931 0.284
ssr2998 Reverse -287 -306 4.52268 0.29
slr1794 Reverse -373 -392 5.89931 0.284
slr1794 Reverse -240 -259 4.32602 0.293
sll1191 Forward -348 -329 12.9791 0.158
sll1191 Reverse -287 -306 4.52268 0.29
slr0964 Reverse -329 -348 14.2574 0.145
ssl1792 Reverse -97 -116 4.22769 0.293
sll0926 Forward -99 -80 4.12936 0.293
sll1020 Forward -186 -167 8.16093 0.25
sll1017 Reverse -95 -114 5.60432 0.284
slr1400 Forward -147 -128 5.60432 0.284
sll0641 Forward -172 -153 8.35759 0.25
slr1591 Reverse -36 -55 5.11266 0.287
sll1510 Reverse -230 -249 7.7676 0.251
slr1041 Reverse -256 -275 7.37428 0.264
slr1046 Reverse -125 -144 5.40766 0.287
slr1053 Reverse -341 -360 7.47261 0.264
ssr2962 Reverse -355 -374 5.11266 0.287
ssr2962 Reverse -209 -228 4.42435 0.292
sll1751 Forward -296 -277 6.29264 0.284
sll1750 Reverse -210 -229 5.01433 0.29
sll1937 Reverse -114 -133 14.2574 0.145
slr1911 Reverse -344 -363 5.211 0.287
slr1917 Reverse -298 -317 8.25926 0.25
slr1917 Forward -322 -303 8.16093 0.25
sll0998 Reverse -246 -265 4.81767 0.29
slr1019 Forward -375 -356 4.81767 0.29
sll0996 Forward -259 -240 9.43923 0.235
sll0996 Reverse -235 -254 6.39097 0.284
sll0983 Forward -153 -134 14.4541 0.145
sll0983 Forward -273 -254 10.3242 0.204
sll0982 Reverse -112 -131 5.89931 0.284
sll1300 Reverse -241 -260 8.06259 0.25
ssr2315 Reverse -338 -357 6.58763 0.284
slr1384 Reverse -159 -178 4.12936 0.293
sll1293 Reverse -186 -205 4.42435 0.292
sll1284 Forward -400 -381 5.80098 0.284
slr2025 Forward -224 -205 7.57094 0.26
sll1078 Reverse -329 -348 8.06259 0.25
slr1147 Reverse -344 -363 8.25926 0.25
sll1820 Forward -193 -174 11.0125 0.194
sll1807 Reverse -43 -62 7.86593 0.251
slr1895 Forward -240 -221 23.8939 0.0167
slr1895 Reverse -342 -361 7.96426 0.25
sll1791 Forward -205 -186 4.52268 0.29
sll1118 Reverse -250 -269 4.32602 0.293
slr1198 Forward -268 -249 4.32602 0.293
slr1215 Forward -356 -337 5.60432 0.284
slr2076 Forward -116 -97 7.7676 0.251
sll1743 Reverse -275 -294 8.16093 0.25
sll1726 Reverse -235 -254 5.50599 0.284
slr1537 Forward -121 -102 4.52268 0.29
slr1550 Forward -207 -188 4.81767 0.29
ssl3177 Forward -172 -153 5.30933 0.287
slr1224 Forward -105 -86 6.09597 0.284
slr1225 Reverse -182 -201 5.70265 0.284
slr1436 Forward -174 -155 3.93269 0.297
sll1359 Reverse -250 -269 4.32602 0.293
slr1444 Forward -365 -346 13.1758 0.158
sll1353 Forward -264 -245 4.71934 0.29
sll1281 Forward -344 -325 12.6841 0.158
slr1362 Forward -271 -252 4.52268 0.29
slr1363 Reverse -282 -301 5.50599 0.284
slr1368 Reverse -35 -54 13.1758 0.158
sll1268 Forward -211 -192 4.03102 0.295
sll0868 Reverse -114 -133 8.84924 0.249
sll0864 Reverse -90 -109 8.55425 0.25
sll0860 Forward -29 -10 10.1275 0.211
slr1410 Reverse -223 -242 8.06259 0.25
sll1774 Reverse -231 -250 7.96426 0.25
sll1771 Forward -119 -100 4.22769 0.293
slr1874 Reverse -307 -326 18.3873 0.119
slr1874 Reverse -273 -292 5.80098 0.284
sll1766 Reverse -209 -228 6.68596 0.284
slr1885 Forward -64 -45 3.93269 0.297
sll2007 Forward -157 -138 4.12936 0.293
sll1702 Reverse -55 -74 5.70265 0.284
slr1732 Forward -286 -267 7.47261 0.264
slr1734 Reverse -209 -228 11.7992 0.178
slr1734 Reverse -364 -383 4.62101 0.29
sll1624 Reverse -290 -309 12.7825 0.158
slr1744 Forward -329 -310 5.80098 0.284
slr0851 Forward -211 -192 5.40766 0.287
slr0854 Reverse -226 -245 11.9958 0.177
sll0846 Forward -63 -44 5.70265 0.284
slr0862 Reverse -127 -146 5.70265 0.284
sll0842 Forward -257 -238 6.68596 0.284
slr0864 Forward -292 -273 3.93269 0.297
slr1262 Reverse -356 -375 5.70265 0.284
sll1909 Reverse -195 -214 6.78429 0.284
sll1908 Forward -102 -83 8.75091 0.249
slr1990 Reverse -159 -178 8.75091 0.249
slr1990 Reverse -300 -319 6.78429 0.284
slr1993 Forward -156 -137 4.916 0.29
slr1999 Reverse -45 -64 11.6025 0.187
slr2003 Reverse -71 -90 5.01433 0.29
slr1719 Reverse -223 -242 3.93269 0.297
slr1722 Forward -127 -108 5.211 0.287
sll1596 Reverse -219 -238 3.93269 0.297
sll1586 Forward -71 -52 4.916 0.29
ssl0453 Forward -399 -380 5.211 0.287
ssl0452 Forward -124 -105 5.211 0.287
sll0242 Reverse -241 -260 4.12936 0.293
slr2089 Reverse -170 -189 14.0608 0.145
sll1980 Reverse -236 -255 4.916 0.29
slr2099 Reverse -308 -327 6.29264 0.284
slr2099 Forward -270 -251 5.60432 0.284
slr1511 Reverse -350 -369 5.50599 0.284
slr1513 Forward -112 -93 9.3409 0.235
slr1519 Reverse -224 -243 15.3391 0.145
sll1221 Reverse -131 -150 7.96426 0.25
sll1218 Reverse -160 -179 8.25926 0.25
slr0813 Forward -359 -340 4.42435 0.292
sll0808 Forward -214 -195 6.29264 0.284
slr0821 Reverse -207 -226 6.29264 0.284
sll1263 Forward -282 -263 12.2908 0.17
slr1959 Reverse -261 -280 12.2908 0.17
sll1891 Reverse -165 -184 14.1591 0.145
sll1879 Reverse -256 -275 5.89931 0.284
sll1878 Forward -241 -222 10.0292 0.211
sll1878 Forward -284 -265 6.4893 0.284
slr1978 Forward -174 -155 7.96426 0.25
sll1387 Forward -83 -64 5.11266 0.287
sll1384 Forward -202 -183 12.9791 0.158
sll1384 Reverse -280 -299 5.50599 0.284
slr1270 Forward -176 -157 9.14423 0.239
slr1273 Forward -58 -39 5.60432 0.284
slr1276 Reverse -75 -94 6.09597 0.284
sll1173 Reverse -240 -259 6.58763 0.284
slr1288 Forward -245 -226 12.6841 0.158
sll1440 Reverse -197 -216 6.39097 0.284
sll1435 Reverse -271 -290 4.71934 0.29
sll1099 Reverse -359 -378 7.96426 0.25
sll1089 Reverse -54 -73 7.7676 0.251
slr1173 Forward -266 -247 4.03102 0.295
ssr1951 Reverse -93 -112 4.916 0.29
slr1174 Reverse -334 -353 4.916 0.29
slr1678 Forward -140 -121 4.62101 0.29
sll1556 Reverse -33 -52 9.3409 0.235
slr0938 Forward -228 -209 7.27595 0.267
slr0953 Forward -152 -133 4.62101 0.29
sll1541 Forward -296 -277 9.53756 0.231
sll1541 Forward -77 -58 6.29264 0.284
sll1541 Reverse -248 -267 4.03102 0.295
ssr2723 Reverse -51 -70 6.29264 0.284
sll1520 Reverse -303 -322 3.93269 0.297
slr0445 Forward -251 -232 8.35759 0.25
sll0272 Forward -317 -298 11.9958 0.177
sll0269 Forward -60 -41 6.19431 0.284
slr0288 Forward -301 -282 9.93088 0.215
ssl0483 Reverse -133 -152 4.03102 0.295
slr0292 Forward -206 -187 4.03102 0.295
slr0294 Forward -197 -178 26.5488 0.00335
ssl0707 Reverse -106 -125 5.70265 0.284
slr0404 Forward -197 -178 5.70265 0.284
sll0355 Forward -321 -302 5.70265 0.284
slr0144 Forward -49 -30 9.14423 0.239
slr0145 Reverse -58 -77 11.3075 0.189
slr0151 Forward -287 -268 4.62101 0.29
slr0162 Forward -136 -117 13.0775 0.158
sll1864 Reverse -151 -170 7.7676 0.251
sll1861 Forward -236 -217 10.7175 0.194
slr1946 Forward -216 -197 4.62101 0.29
slr1950 Reverse -340 -359 8.16093 0.25
slr1951 Forward -356 -337 5.01433 0.29
slr0326 Forward -332 -313 4.03102 0.295
sll0171 Reverse -345 -364 10.4225 0.203
slr0361 Reverse -145 -164 5.80098 0.284
slr0370 Forward -369 -350 7.37428 0.264
sll0336 Reverse -378 -397 5.70265 0.284
slr0379 Reverse -211 -230 4.03102 0.295
slr0380 Reverse -161 -180 13.7658 0.155
slr0387 Forward -164 -145 9.63589 0.229
slr0771 Reverse -249 -268 4.22769 0.293
sll0764 Forward -48 -29 10.3242 0.204
sll0763 Reverse -28 -47 6.39097 0.284
sll0759 Reverse -308 -327 8.35759 0.25
slr0784 Reverse -381 -400 9.14423 0.239
slr0346 Reverse -268 -287 8.55425 0.25
sll0319 Forward -239 -220 9.0459 0.239
slr0348 Reverse -38 -57 9.0459 0.239
slr0351 Forward -322 -303 10.7175 0.194
slr0357 Reverse -172 -191 5.50599 0.284
sll0019 Forward -394 -375 4.62101 0.29
slr0011 Forward -279 -260 6.98095 0.283
slr0217 Forward -235 -216 6.19431 0.284
sll0207 Reverse -304 -323 4.52268 0.29
slr0232 Forward -378 -359 5.30933 0.287
sll0416 Forward -235 -216 7.27595 0.267
sll0408 Forward -202 -183 7.86593 0.251
slr0435 Reverse -223 -242 4.22769 0.293
sll0401 Forward -218 -199 15.2408 0.145
sll0069 Forward -185 -166 10.0292 0.211
sll0065 Reverse -312 -331 11.3075 0.189
slr0053 Forward -63 -44 11.3075 0.189
slr0487 Forward -323 -304 7.66927 0.255
slr0492 Forward -396 -377 6.78429 0.284
sll0397 Reverse -161 -180 4.71934 0.29
slr0416 Reverse -134 -153 6.19431 0.284
sll0370 Forward -155 -136 6.4893 0.284
slr0204 Forward -339 -320 8.25926 0.25
slr0211 Forward -106 -87 10.4225 0.203
slr0895 Reverse -251 -270 10.8159 0.194
slr0903 Forward -31 -12 12.9791 0.158
slr0903 Forward -32 -13 7.37428 0.264
slr0559 Forward -78 -59 7.86593 0.251
slr0565 Reverse -378 -397 4.42435 0.292
sll0550 Forward -69 -50 9.53756 0.231
ssl1045 Reverse -279 -298 14.0608 0.145
slr0574 Forward -130 -111 14.0608 0.145
slr0825 Forward -332 -313 5.60432 0.284
slr0839 Reverse -156 -175 5.70265 0.284
sll0822 Forward -356 -337 12.9791 0.158
sll0078 Reverse -265 -284 12.1925 0.172
sll0489 Reverse -325 -344 11.5042 0.189
sll0484 Reverse -274 -293 8.25926 0.25
sll0099 Forward -368 -349 5.70265 0.284
slr0121 Reverse -201 -220 4.52268 0.29
sll0289 Forward -65 -46 4.71934 0.29
sll0794 Reverse -329 -348 4.12936 0.293
slr0799 Forward -332 -313 5.50599 0.284
sll0775 Reverse -328 -347 5.211 0.287
slr0697 Forward -226 -207 5.211 0.287
sll0678 Forward -210 -191 10.7175 0.194
smr0002 Forward -249 -230 10.7175 0.194
sll0664 Forward -383 -364 10.9142 0.194
slr0710 Reverse -304 -323 10.9142 0.194
ssl1263 Reverse -263 -282 4.71934 0.29
slr0023 Forward -182 -163 10.4225 0.203
sll0041 Forward -378 -359 4.32602 0.293
sll0036 Forward -273 -254 5.80098 0.284
sll0036 Forward -237 -218 4.22769 0.293
slr0036 Reverse -230 -249 9.73422 0.225
slr0044 Forward -313 -294 19.469 0.119
slr0530 Reverse -270 -289 14.6508 0.145
sll0498 Forward -155 -136 6.39097 0.284
sll0496 Reverse -202 -221 7.66927 0.255
sll0897 Forward -87 -68 10.8159 0.194
slr0553 Forward -399 -380 6.29264 0.284
slr0554 Reverse -181 -200 4.81767 0.29
sll0524 Reverse -331 -350 8.35759 0.25
slr0557 Forward -307 -288 10.6192 0.198
slr1423 Reverse -299 -318 4.12936 0.293
slr1428 Forward -379 -360 5.70265 0.284
slr1452 Reverse -250 -269 4.916 0.29
slr1462 Forward -253 -234 11.3075 0.189
slr1463 Forward -217 -198 8.06259 0.25
slr1464 Forward -157 -138 15.7324 0.145
sll0624 Forward -162 -143 5.11266 0.287
slr0662 Reverse -253 -272 5.11266 0.287
slr1556 Reverse -88 -107 8.84924 0.249
slr1563 Reverse -303 -322 9.3409 0.235
slr1564 Reverse -161 -180 14.2574 0.145
slr1568 Reverse -239 -258 6.09597 0.284
sll1479 Forward -320 -301 12.4875 0.166
sll0727 Reverse -262 -281 4.62101 0.29
sll0726 Forward -149 -130 6.58763 0.284
slr0756 Reverse -193 -212 6.58763 0.284
sll1542 Reverse -180 -199 5.211 0.287
sll0451 Forward -109 -90 11.7992 0.178
slr0453 Reverse -230 -249 6.4893 0.284
slr0457 Forward -276 -257 9.0459 0.239
slr1188 Reverse -160 -179 4.71934 0.29
slr0586 Reverse -134 -153 4.32602 0.293
sll0577 Forward -92 -73 6.98095 0.283
slr0588 Reverse -104 -123 6.98095 0.283
slr0593 Forward -22 -3 4.916 0.29
slr0594 Reverse -366 -385 4.62101 0.29
slr5056 Reverse -172 -191 14.0608 0.145
sll5062 Reverse -257 -276 4.81767 0.29
ssl5065 Forward -374 -355 6.68596 0.284
ssr5121 Forward -193 -174 5.211 0.287
ssl5129 Forward -371 -352 5.40766 0.287
ssl7004 Forward -396 -377 9.0459 0.239
ssl7039 Reverse -174 -193 10.0292 0.211
slr7041 Forward -186 -167 10.0292 0.211
sll7043 Forward -60 -41 6.29264 0.284
sll7047 Reverse -122 -141 4.12936 0.293
slr7049 Forward -355 -336 4.12936 0.293
ssl8003 Forward -193 -174 8.75091 0.249
sll8020 Forward -292 -273 4.22769 0.293
slr8037 Forward -64 -45 4.22769 0.293
ssl6018 Forward -196 -177 17.3057 0.119
ssl6018 Forward -194 -175 5.99764 0.284
ssr6020 Reverse -227 -246 17.3057 0.119
ssr6020 Reverse -229 -248 5.99764 0.284
ssl6077 Forward -196 -177 17.3057 0.119
ssl6077 Forward -194 -175 5.99764 0.284
ssr6079 Reverse -227 -246 17.3057 0.119
ssr6079 Reverse -229 -248 5.99764 0.284
6803t07 Reverse -73 -92 11.2092 0.192
6803t12 Forward -122 -103 12.6841 0.158
6803t17 Reverse -254 -273 5.30933 0.287
6803t18 Forward -263 -244 4.52268 0.29
6803t35 Reverse -278 -297 14.5524 0.145
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.600  0.000  0.400  
0.000 0.000 0.000 1.000
0.100 0.300 0.400 0.200
0.100 0.000 0.200 0.700
0.000 0.600 0.400 0.000
0.200 0.600 0.100 0.100
0.000 1.000 0.000 0.000
0.200 0.800 0.000 0.000
0.100 0.200 0.500 0.200
0.000 1.000 0.000 0.000
0.200 0.800 0.000 0.000
0.100 0.200 0.500 0.200
0.000 0.500 0.200 0.300
0.000 0.000 0.000 1.000
0.000 0.100 0.700 0.200
0.000 0.200 0.800 0.000
0.000 0.800 0.200 0.000
0.000 0.400 0.500 0.100
0.000 0.000 1.000 0.000
0.000 0.800 0.200 0.000