Your browser is old and dusty. Try Google Chrome!

Details for NP_442007.1_8

Name NP_442007.1_8
Length 19
Regular expression [CGT][CT][AG][CA][CGT]A[TC]CGC[ACT][CG]C[CT]AGC[AC][AC]
Central No

Motif logo

Genes containing this motif

152 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1060 Forward -361 -343 8.57317 0.297
ssl2069 Forward -174 -156 8.57317 0.297
ssr1853 Reverse -95 -113 8.57317 0.297
slr0721 Forward -293 -275 8.57317 0.297
slr0729 Reverse -199 -217 11.5231 0.258
slr0730 Reverse -377 -395 8.76983 0.297
sll0703 Forward -304 -286 13.6864 0.258
slr0740 Forward -295 -277 10.7364 0.258
slr0242 Reverse -101 -119 9.75313 0.269
slr0250 Reverse -194 -212 13.1947 0.258
slr1094 Forward -132 -114 8.76983 0.297
slr1099 Reverse -178 -196 10.7364 0.258
ssl2009 Reverse -300 -318 10.0481 0.258
sll1027 Forward -36 -18 21.0611 0.0819
slr1109 Reverse -243 -261 21.0611 0.0819
slr1110 Reverse -208 -226 11.6214 0.258
sll1685 Reverse -295 -313 10.9331 0.258
sll1682 Reverse -367 -385 14.5713 0.242
sll1677 Forward -260 -242 15.948 0.23
slr1789 Forward -223 -205 10.2448 0.258
sll1663 Reverse -342 -360 10.2448 0.258
slr0965 Reverse -294 -312 9.75313 0.269
sll0922 Reverse -251 -269 10.6381 0.258
slr1085 Reverse -191 -209 11.4247 0.258
slr1400 Forward -293 -275 11.4247 0.258
slr1592 Reverse -287 -305 9.94979 0.266
slr2041 Forward -181 -163 9.26148 0.281
sll1830 Forward -267 -249 12.1131 0.258
sll1830 Reverse -31 -49 8.76983 0.297
slr1919 Forward -116 -98 8.76983 0.297
slr1030 Reverse -258 -276 10.7364 0.258
ssr3410 Reverse -101 -119 10.8348 0.258
slr2011 Reverse -366 -384 10.8348 0.258
sll1921 Reverse -287 -305 8.76983 0.297
sll1915 Reverse -71 -89 11.2281 0.258
slr2026 Forward -99 -81 11.2281 0.258
slr1208 Forward -34 -16 11.0314 0.258
sll1724 Reverse -289 -307 10.7364 0.258
sll1721 Forward -145 -127 10.7364 0.258
slr1838 Reverse -233 -251 10.7364 0.258
slr1552 Reverse -181 -199 15.8496 0.23
slr1218 Forward -290 -272 10.1465 0.258
ssr2060 Reverse -374 -392 18.2096 0.153
slr1240 Reverse -251 -269 8.76983 0.297
slr1448 Forward -276 -258 12.5064 0.258
sll1349 Reverse -254 -272 9.26148 0.281
sll1282 Reverse -46 -64 14.768 0.237
sll1282 Reverse -218 -236 9.6548 0.269
sll1265 Reverse -273 -291 13.588 0.258
sll1305 Forward -97 -79 10.4414 0.258
slr1876 Reverse -115 -133 12.703 0.258
ssl3291 Forward -348 -330 9.26148 0.281
slr1811 Forward -331 -313 14.8663 0.237
sll1691 Forward -251 -233 10.9331 0.258
slr1820 Reverse -376 -394 11.1298 0.258
sll1623 Forward -332 -314 12.2114 0.258
sll1620 Reverse -333 -351 10.8348 0.258
sll0847 Reverse -312 -330 15.1613 0.236
slr0869 Forward -265 -247 12.998 0.258
sll1159 Forward -348 -330 8.57317 0.297
slr1245 Reverse -221 -239 8.57317 0.297
sll1956 Reverse -163 -181 10.3431 0.258
sll1605 Forward -125 -107 9.06482 0.293
slr1718 Reverse -138 -156 9.06482 0.293
slr1731 Forward -399 -381 9.45814 0.281
ssl3769 Forward -229 -211 18.0129 0.153
slr1510 Reverse -232 -250 15.5546 0.23
slr1520 Reverse -301 -319 10.9331 0.258
sll0817 Reverse -27 -45 13.883 0.258
ssr1391 Reverse -380 -398 12.4081 0.258
slr1968 Reverse -228 -246 18.0129 0.153
slr1281 Reverse -118 -136 11.5231 0.258
slr1281 Forward -375 -357 8.6715 0.297
sll1446 Forward -264 -246 10.8348 0.258
sll1101 Reverse -182 -200 11.2281 0.258
sll1096 Reverse -309 -327 19.8812 0.112
sll1095 Forward -334 -316 9.6548 0.269
slr1164 Forward -392 -374 17.7179 0.153
sll1089 Forward -161 -143 10.0481 0.258
sll1556 Reverse -276 -294 10.4414 0.258
slr0954 Forward -101 -83 10.0481 0.258
sll1524 Forward -186 -168 9.6548 0.269
slr1644 Reverse -139 -157 9.6548 0.269
sll1521 Reverse -262 -280 15.063 0.236
sll0420 Reverse -179 -197 10.4414 0.258
sll0273 Reverse -332 -350 10.0481 0.258
sll0264 Forward -276 -258 11.1298 0.258
slr0401 Reverse -30 -48 10.1465 0.258
slr1929 Reverse -225 -243 10.3431 0.258
slr1929 Forward -240 -222 9.55647 0.276
ssr3307 Forward -306 -288 8.86816 0.297
slr1946 Reverse -358 -376 9.35981 0.281
slr0992 Reverse -144 -162 8.76983 0.297
sll0337 Reverse -37 -55 16.2429 0.23
slr0378 Reverse -378 -396 13.3914 0.258
slr0379 Reverse -311 -329 12.3097 0.258
sll0759 Forward -230 -212 11.0314 0.258
slr0341 Reverse -241 -259 10.6381 0.258
slr0344 Reverse -216 -234 8.57317 0.297
sll0312 Forward -251 -233 9.6548 0.269
slr0357 Forward -266 -248 13.0964 0.258
sll0208 Forward -261 -243 13.0964 0.258
sll0204 Reverse -264 -282 20.7661 0.0819
sll0200 Reverse -105 -123 11.7197 0.258
sll0192 Forward -305 -287 10.2448 0.258
sll0415 Forward -311 -293 11.1298 0.258
slr0438 Forward -395 -377 9.45814 0.281
slr0058 Forward -105 -87 8.76983 0.297
slr0483 Reverse -183 -201 10.1465 0.258
slr0484 Reverse -329 -347 10.0481 0.258
slr0491 Forward -363 -345 10.7364 0.258
sll0454 Reverse -379 -397 11.7197 0.258
sll0396 Forward -268 -250 11.2281 0.258
sll0189 Forward -254 -236 10.7364 0.258
ssl0352 Forward -141 -123 17.6196 0.153
slr0559 Forward -337 -319 9.26148 0.281
ssl1533 Reverse -288 -306 11.7197 0.258
sll0478 Forward -248 -230 10.7364 0.258
sll0467 Forward -197 -179 8.57317 0.297
ssr1038 Reverse -341 -359 18.7012 0.153
slr0108 Reverse -233 -251 8.57317 0.297
slr0110 Forward -295 -277 8.96649 0.297
slr0112 Reverse -72 -90 10.4414 0.258
sll0289 Reverse -267 -285 12.1131 0.258
slr0313 Reverse -268 -286 10.0481 0.258
sll0036 Reverse -258 -276 11.0314 0.258
sll0514 Reverse -290 -308 12.703 0.258
slr0529 Forward -150 -132 12.703 0.258
ssl1707 Forward -220 -202 8.57317 0.297
sll0897 Reverse -208 -226 9.6548 0.269
slr0552 Forward -173 -155 10.4414 0.258
slr1459 Reverse -278 -296 13.4897 0.258
sll0622 Reverse -314 -332 13.6864 0.258
slr1562 Reverse -91 -109 11.5231 0.258
slr1564 Forward -346 -328 10.1465 0.258
slr1579 Forward -61 -43 15.7513 0.23
sll1484 Forward -107 -89 15.4563 0.23
sll0733 Reverse -287 -305 11.1298 0.258
slr1653 Reverse -285 -303 9.16315 0.287
slr1666 Reverse -345 -363 9.26148 0.281
slr0453 Forward -303 -285 11.9164 0.258
slr1177 Forward -57 -39 10.5398 0.258
slr1177 Forward -365 -347 10.0481 0.258
sll1109 Forward -190 -172 13.3914 0.258
sll1106 Forward -45 -27 10.0481 0.258
slr1192 Reverse -155 -173 10.0481 0.258
sll0577 Reverse -344 -362 9.26148 0.281
slr0589 Forward -274 -256 9.26148 0.281
slr0598 Reverse -118 -136 8.57317 0.297
slr0600 Forward -235 -217 9.85146 0.269
slr0601 Forward -214 -196 9.85146 0.269
ssr7072 Forward -349 -331 9.16315 0.287
slr7081 Forward -389 -371 9.35981 0.281
sll8004 Reverse -108 -126 10.5398 0.258
ssl8008 Forward -214 -196 10.9331 0.258
slr6097 Reverse -343 -361 9.6548 0.269
6803t36 Reverse -122 -140 8.57317 0.297
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.455  0.273  0.273  
0.000 0.455 0.091 0.455
0.636 0.000 0.364 0.000
0.273 0.545 0.182 0.000
0.000 0.455 0.273 0.273
0.818 0.000 0.182 0.000
0.000 0.273 0.091 0.636
0.000 0.909 0.091 0.000
0.000 0.091 0.909 0.000
0.182 0.636 0.182 0.000
0.273 0.273 0.182 0.273
0.000 0.727 0.273 0.000
0.091 0.909 0.000 0.000
0.000 0.636 0.000 0.364
1.000 0.000 0.000 0.000
0.000 0.182 0.818 0.000
0.000 1.000 0.000 0.000
0.636 0.364 0.000 0.000
0.636 0.364 0.000 0.000