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Details for NP_442003.1_4

Name NP_442003.1_4
Length 20
Regular expression [GC][CT]G[AG]T[CG]GC[TC][AC][GA][CT][CAG][AG][AGT][CG]G[GA]GG
Central No

Motif logo

Genes containing this motif

313 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Forward -96 -77 9.3409 0.3
sll1394 Reverse -237 -256 9.3409 0.3
slr1115 Forward -224 -205 9.73422 0.299
sll1064 Forward -283 -264 11.7008 0.276
sll1060 Forward -359 -340 10.3242 0.288
ssl2069 Forward -172 -153 10.3242 0.288
ssr1853 Reverse -97 -116 10.3242 0.288
sll1057 Forward -72 -53 14.3558 0.22
sll1054 Reverse -64 -83 10.3242 0.288
sll1049 Forward -337 -318 13.9625 0.234
sll0716 Reverse -293 -312 14.2574 0.223
sll0703 Forward -288 -269 9.3409 0.3
slr0741 Forward -216 -197 15.3391 0.201
slr0241 Reverse -213 -232 9.53756 0.3
sml0003 Forward -237 -218 18.0924 0.141
slr0252 Forward -300 -281 11.0125 0.288
sll0218 Forward -362 -343 13.1758 0.257
sll0216 Forward -343 -324 11.4058 0.277
slr1097 Forward -98 -79 11.2092 0.278
slr1099 Reverse -372 -391 10.9142 0.288
sll1028 Reverse -107 -126 19.9606 0.0905
sll1027 Reverse -65 -84 13.0775 0.257
slr1109 Forward -214 -195 13.0775 0.257
slr1772 Forward -282 -263 10.2259 0.288
slr1776 Forward -397 -378 10.5209 0.288
sll1667 Forward -246 -227 16.1257 0.19
slr1796 Reverse -165 -184 15.6341 0.195
slr1799 Reverse -143 -162 10.5209 0.288
sll1201 Reverse -39 -58 9.24257 0.3
slr1291 Forward -187 -168 9.24257 0.3
sll1198 Forward -61 -42 11.3075 0.277
slr1305 Forward -334 -315 9.63589 0.299
slr0971 Forward -295 -276 10.8159 0.288
sll0925 Forward -95 -76 10.5209 0.288
slr0974 Reverse -172 -191 10.5209 0.288
slr1611 Forward -325 -306 18.0924 0.141
slr1611 Reverse -301 -320 9.3409 0.3
slr1062 Forward -306 -287 16.5191 0.19
sll1025 Reverse -162 -181 9.14423 0.3
sll1022 Forward -134 -115 14.2574 0.223
sll1021 Forward -169 -150 9.24257 0.3
sll0656 Reverse -337 -356 11.6025 0.277
sll0634 Forward -373 -354 12.9791 0.257
slr1591 Forward -315 -296 15.0441 0.205
slr1591 Reverse -308 -327 9.14423 0.3
slr1592 Forward -285 -266 14.3558 0.22
sll1509 Forward -128 -109 10.8159 0.288
slr1599 Reverse -238 -257 10.8159 0.288
slr1051 Reverse -368 -387 15.4374 0.2
sll1006 Reverse -30 -49 14.5524 0.219
sll1003 Forward -396 -377 17.994 0.141
sll1643 Reverse -132 -151 15.1424 0.203
sll1643 Forward -321 -302 9.93088 0.296
slr1762 Forward -112 -93 15.1424 0.203
slr1763 Forward -195 -176 13.1758 0.257
sll1640 Forward -77 -58 15.5357 0.195
sll1941 Forward -312 -293 9.73422 0.299
slr2042 Reverse -148 -167 9.73422 0.299
sll1940 Reverse -336 -355 14.8474 0.205
ssr3465 Forward -377 -358 14.8474 0.205
sll1834 Reverse -118 -137 12.0942 0.272
slr1915 Forward -382 -363 12.0942 0.272
sll0992 Forward -205 -186 9.14423 0.3
slr1032 Forward -329 -310 10.8159 0.288
sll1298 Reverse -339 -358 16.3224 0.19
slr1383 Forward -328 -309 16.3224 0.19
slr1391 Reverse -158 -177 14.5524 0.219
slr1398 Forward -256 -237 11.8975 0.272
sll1574 Forward -207 -188 9.93088 0.296
ssr2857 Forward -195 -176 9.24257 0.3
sll1571 Forward -281 -262 13.9625 0.234
sll1920 Forward -268 -249 15.1424 0.203
slr1140 Forward -147 -128 11.9958 0.272
sll1078 Forward -25 -6 9.63589 0.299
slr1149 Reverse -217 -236 16.4207 0.19
ssl2084 Reverse -49 -68 13.2741 0.257
sll1068 Reverse -173 -192 12.1925 0.272
slr1890 Forward -240 -221 12.1925 0.272
sll1825 Forward -104 -85 9.14423 0.3
ssl3446 Reverse -332 -351 11.7992 0.272
sll1797 Reverse -28 -47 9.93088 0.296
slr1895 Forward -120 -101 9.93088 0.296
slr1200 Forward -388 -369 9.14423 0.3
slr1212 Reverse -156 -175 10.0292 0.296
sll1968 Reverse -81 -100 11.7992 0.272
ssl3335 Forward -271 -252 9.93088 0.296
sll1740 Reverse -159 -178 9.24257 0.3
slr1830 Reverse -338 -357 10.2259 0.288
sll1736 Forward -247 -228 10.7175 0.288
sll1734 Reverse -87 -106 11.4058 0.277
sll1726 Reverse -298 -317 16.5191 0.19
slr1841 Reverse -275 -294 9.43923 0.3
slr1843 Forward -295 -276 10.2259 0.288
slr1540 Forward -169 -150 10.6192 0.288
slr1543 Forward -392 -373 16.6174 0.19
slr1751 Forward -211 -192 9.83255 0.299
sll1142 Forward -330 -311 9.63589 0.299
slr1235 Reverse -227 -246 11.3075 0.277
sll1127 Forward -154 -135 11.3075 0.277
slr1239 Reverse -47 -66 11.3075 0.277
sll1362 Forward -97 -78 9.53756 0.3
ssr2406 Reverse -97 -116 9.53756 0.3
slr1448 Forward -320 -301 13.7658 0.234
slr1449 Reverse -364 -383 11.7992 0.272
sll1350 Reverse -52 -71 10.9142 0.288
sll1348 Reverse -11 -30 11.5042 0.277
sll1348 Forward -327 -308 10.8159 0.288
sll0876 Forward -108 -89 9.43923 0.3
slr0883 Forward -362 -343 10.7175 0.288
sll0863 Reverse -177 -196 9.73422 0.299
ssl2595 Forward -361 -342 12.0942 0.272
sll1304 Forward -199 -180 9.63589 0.299
slr1859 Reverse -87 -106 12.7825 0.257
slr1876 Forward -269 -250 11.7008 0.276
sll1764 Forward -258 -239 13.9625 0.234
sll1761 Reverse -140 -159 12.3892 0.27
ssr3189 Reverse -130 -149 13.9625 0.234
sll1755 Forward -362 -343 14.9458 0.205
sll2006 Reverse -218 -237 9.53756 0.3
ssl3829 Forward -224 -205 10.5209 0.288
slr2141 Reverse -214 -233 10.5209 0.288
sll1709 Forward -199 -180 9.63589 0.299
sll1698 Forward -190 -171 10.6192 0.288
slr1813 Forward -89 -70 19.469 0.0905
sll1693 Reverse -252 -271 9.63589 0.299
sll1628 Forward -135 -116 11.3075 0.277
sll1628 Reverse -315 -334 9.63589 0.299
slr1734 Reverse -29 -48 11.3075 0.277
slr1744 Reverse -244 -263 13.2741 0.257
slr1747 Reverse -160 -179 15.8307 0.19
sll0858 Reverse -110 -129 10.4225 0.288
sll0856 Forward -375 -356 11.6025 0.277
sll0855 Reverse -55 -74 17.994 0.141
sll0839 Forward -313 -294 10.3242 0.288
sll0839 Reverse -331 -350 9.24257 0.3
sll1151 Reverse -308 -327 11.8975 0.272
slr1255 Reverse -219 -238 9.14423 0.3
sll1961 Reverse -102 -121 13.3725 0.257
sll1959 Reverse -159 -178 11.3075 0.277
sll1959 Reverse -30 -49 9.43923 0.3
sll1905 Reverse -252 -271 16.3224 0.19
slr0261 Reverse -303 -322 17.109 0.19
slr0261 Reverse -321 -340 10.2259 0.288
slr0264 Reverse -168 -187 11.6025 0.277
sll0250 Reverse -83 -102 11.3075 0.277
sll0248 Forward -136 -117 11.2092 0.278
sll0236 Reverse -104 -123 16.6174 0.19
slr2083 Forward -296 -277 10.6192 0.288
sll1988 Forward -239 -220 10.0292 0.296
slr2101 Reverse -346 -365 20.354 0.0905
slr2101 Forward -302 -283 9.93088 0.296
sll1973 Forward -234 -215 9.93088 0.296
ssl2781 Forward -306 -287 12.1925 0.272
slr1517 Forward -131 -112 17.7974 0.15
slr1518 Reverse -83 -102 10.5209 0.288
sll2001 Forward -24 -5 9.83255 0.299
ssr3570 Reverse -360 -379 9.83255 0.299
slr1324 Forward -176 -157 18.289 0.141
sll1229 Reverse -184 -203 13.7658 0.234
sll1224 Forward -107 -88 13.6675 0.234
ssr2227 Forward -375 -356 16.6174 0.19
ssr2227 Reverse -358 -377 12.6841 0.262
slr0806 Forward -272 -253 10.2259 0.288
slr0809 Forward -334 -315 11.7992 0.272
slr0820 Forward -174 -155 10.2259 0.288
slr0823 Forward -302 -283 10.1275 0.291
sll1254 Reverse -367 -386 9.14423 0.3
slr1343 Reverse -51 -70 9.14423 0.3
sll1247 Forward -24 -5 11.7992 0.272
slr1351 Reverse -229 -248 11.7992 0.272
sll1244 Forward -100 -81 12.9791 0.257
slr1353 Reverse -82 -101 12.9791 0.257
sll1899 Reverse -200 -219 10.8159 0.288
sll1879 Forward -246 -227 11.3075 0.277
slr1978 Reverse -101 -120 15.0441 0.205
slr1984 Reverse -285 -304 11.3075 0.277
sll1867 Reverse -170 -189 11.0125 0.288
sll1380 Forward -136 -117 10.4225 0.288
sll1380 Forward -303 -284 9.3409 0.3
slr1476 Reverse -73 -92 10.4225 0.288
slr1476 Forward -295 -276 10.1275 0.291
sll1378 Reverse -286 -305 9.24257 0.3
sll1182 Reverse -47 -66 12.3892 0.27
sll1180 Forward -66 -47 9.73422 0.299
slr1265 Reverse -294 -313 9.73422 0.299
slr1270 Forward -140 -121 18.9773 0.118
sll1173 Reverse -249 -268 9.3409 0.3
sll1172 Reverse -176 -195 11.7992 0.272
slr1279 Forward -107 -88 11.7992 0.272
sll1167 Reverse -257 -276 10.3242 0.288
slr1287 Forward -306 -287 10.3242 0.288
sll1440 Reverse -51 -70 9.24257 0.3
sll1435 Reverse -207 -226 15.2408 0.203
sll1103 Forward -268 -249 11.9958 0.272
sll1101 Forward -228 -209 11.7992 0.272
slr1675 Reverse -36 -55 13.6675 0.234
slr1697 Reverse -349 -368 11.4058 0.277
slr0950 Reverse -82 -101 13.8641 0.234
slr0952 Forward -328 -309 10.7175 0.288
slr0958 Reverse -72 -91 12.7825 0.257
slr0958 Forward -89 -70 10.8159 0.288
slr1622 Forward -73 -54 15.9291 0.19
sll1521 Forward -346 -327 10.4225 0.288
sll0364 Forward -296 -277 11.6025 0.277
sll0360 Forward -23 -4 12.8808 0.257
slr0401 Forward -176 -157 10.2259 0.288
slr0145 Forward -348 -329 10.2259 0.288
sll0142 Reverse -11 -30 9.3409 0.3
sll1864 Forward -68 -49 10.7175 0.288
sll1854 Reverse -155 -174 10.3242 0.288
sll1849 Reverse -185 -204 10.8159 0.288
slr0990 Forward -380 -361 11.2092 0.278
slr0320 Forward -344 -325 19.5673 0.0905
sll0295 Forward -260 -241 9.3409 0.3
slr0335 Reverse -31 -50 9.3409 0.3
slr0171 Reverse -81 -100 9.3409 0.3
sll0158 Forward -315 -296 14.3558 0.22
slr0361 Forward -145 -126 10.4225 0.288
slr0369 Forward -91 -72 10.9142 0.288
sll0336 Reverse -288 -307 18.0924 0.141
slr0380 Forward -187 -168 19.6656 0.0905
slr0383 Forward -128 -109 9.83255 0.299
sll0327 Forward -232 -213 9.63589 0.299
slr0386 Reverse -84 -103 9.63589 0.299
slr0387 Reverse -126 -145 9.73422 0.299
sll0764 Forward -288 -269 12.3892 0.27
sll0757 Forward -335 -316 9.53756 0.3
slr0780 Reverse -185 -204 9.53756 0.3
sll0021 Reverse -57 -76 15.7324 0.195
sll0018 Forward -271 -252 12.1925 0.272
sll0006 Reverse -351 -370 15.9291 0.19
sll0005 Reverse -360 -379 19.9606 0.0905
ssl0787 Forward -359 -340 10.1275 0.291
sll0402 Reverse -286 -305 11.8975 0.272
sll0069 Forward -90 -71 12.7825 0.257
sll0068 Reverse -147 -166 10.8159 0.288
sll0067 Forward -142 -123 16.6174 0.19
slr0468 Reverse -185 -204 10.9142 0.288
sml0002 Forward -53 -34 16.1257 0.19
slr0477 Reverse -64 -83 16.1257 0.19
sll0613 Reverse -285 -304 9.63589 0.299
slr0415 Reverse -237 -256 11.7008 0.276
sll0379 Forward -266 -247 15.8307 0.19
sll0185 Reverse -146 -165 10.4225 0.288
sll0886 Reverse -325 -344 12.1925 0.272
slr0897 Forward -118 -99 24.6805 0.000958
ssr1528 Forward -361 -342 15.6341 0.195
ssr1528 Reverse -284 -303 12.3892 0.27
slr0906 Reverse -275 -294 9.53756 0.3
slr0923 Reverse -241 -260 13.6675 0.234
sll0833 Reverse -359 -378 10.3242 0.288
ssr1425 Reverse -277 -296 9.43923 0.3
sll0085 Reverse -158 -177 14.7491 0.211
sll0085 Reverse -131 -150 9.14423 0.3
sll0083 Forward -64 -45 9.14423 0.3
slr0078 Forward -364 -345 12.7825 0.257
slr0078 Reverse -153 -172 9.14423 0.3
slr0088 Reverse -105 -124 14.8474 0.205
slr0090 Forward -260 -241 12.6841 0.262
sll0487 Reverse -25 -44 10.6192 0.288
sll0482 Reverse -90 -109 9.14423 0.3
sll0479 Reverse -299 -318 12.1925 0.272
slr0521 Reverse -329 -348 10.8159 0.288
slr0522 Reverse -337 -356 16.7157 0.19
sll0597 Reverse -24 -43 13.4708 0.25
sll0593 Forward -268 -249 23.8939 0.00229
sll0593 Forward -372 -353 14.8474 0.205
slr0112 Reverse -128 -147 12.1925 0.272
slr0316 Reverse -338 -357 9.3409 0.3
sll0780 Forward -362 -343 10.2259 0.288
slr0707 Reverse -118 -137 9.24257 0.3
ssl1255 Reverse -240 -259 9.73422 0.299
sll0041 Reverse -64 -83 13.7658 0.234
sll0039 Reverse -152 -171 10.1275 0.291
sll0027 Reverse -205 -224 13.0775 0.257
slr0530 Forward -102 -83 16.5191 0.19
sll0506 Reverse -108 -127 10.4225 0.288
sll0506 Reverse -286 -305 9.24257 0.3
sll0498 Reverse -152 -171 16.8141 0.19
slr0926 Forward -130 -111 15.5357 0.195
sll0896 Forward -303 -284 9.24257 0.3
slr1431 Reverse -254 -273 14.0608 0.234
slr1459 Reverse -83 -102 12.7825 0.257
sll1363 Reverse -208 -227 13.0775 0.257
slr0652 Forward -269 -250 13.0775 0.257
slr0658 Forward -293 -274 11.0125 0.288
slr1560 Reverse -320 -339 12.4875 0.27
sll1481 Reverse -338 -357 14.5524 0.219
sll1476 Forward -76 -57 10.5209 0.288
slr1583 Reverse -106 -125 10.5209 0.288
slr0749 Reverse -200 -219 9.3409 0.3
sll0727 Reverse -318 -337 9.3409 0.3
slr1660 Forward -131 -112 14.3558 0.22
ssr2781 Reverse -126 -145 9.93088 0.296
slr0455 Forward -177 -158 12.4875 0.27
slr0456 Forward -158 -139 12.9791 0.257
slr0456 Forward -262 -243 12.3892 0.27
slr0457 Reverse -251 -270 12.8808 0.257
slr1182 Forward -185 -166 10.4225 0.288
sll0578 Forward -332 -313 9.24257 0.3
sll0574 Forward -360 -341 11.1109 0.286
sll0569 Forward -277 -258 9.24257 0.3
slr0598 Reverse -299 -318 9.73422 0.299
slr0605 Forward -65 -46 13.6675 0.234
slr0605 Reverse -101 -120 10.1275 0.291
sll5002 Forward -181 -162 11.7992 0.272
sll5048 Reverse -267 -286 12.2908 0.272
sll5081 Forward -231 -212 12.7825 0.257
slr5082 Reverse -259 -278 12.7825 0.257
ssl5113 Reverse -86 -105 9.93088 0.296
slr5124 Forward -183 -164 11.4058 0.277
ssr7036 Forward -309 -290 12.4875 0.27
slr7037 Reverse -231 -250 9.24257 0.3
ssl7039 Forward -185 -166 11.2092 0.278
slr7041 Reverse -175 -194 11.2092 0.278
ssl7046 Forward -192 -173 13.7658 0.234
slr7091 Forward -354 -335 11.4058 0.277
slr7094 Forward -137 -118 10.1275 0.291
slr7101 Reverse -268 -287 10.7175 0.288
sll8009 Forward -276 -257 10.2259 0.288
slr8023 Reverse -179 -198 9.93088 0.296
sll8032 Forward -66 -47 9.43923 0.3
sll8033 Reverse -328 -347 12.4875 0.27
ssr6099 Reverse -185 -204 14.4541 0.22
6803t01 Forward -169 -150 11.6025 0.277
6803t06 Forward -299 -280 13.6675 0.234
6803t09 Forward -87 -68 9.93088 0.296
6803t12 Forward -395 -376 11.3075 0.277
6803t14 Forward -151 -132 15.3391 0.201
6803t16 Reverse -85 -104 9.83255 0.299
6803t29 Forward -348 -329 15.9291 0.19
6803t31 Forward -267 -248 11.9958 0.272
6803t40 Forward -348 -329 15.9291 0.19
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.375  0.625  0.000  
0.062 0.438 0.062 0.438
0.188 0.000 0.812 0.000
0.688 0.062 0.250 0.000
0.000 0.000 0.000 1.000
0.000 0.625 0.312 0.062
0.000 0.188 0.812 0.000
0.000 1.000 0.000 0.000
0.188 0.250 0.188 0.375
0.500 0.312 0.188 0.000
0.438 0.000 0.500 0.062
0.062 0.500 0.000 0.438
0.250 0.312 0.250 0.188
0.625 0.000 0.375 0.000
0.438 0.062 0.250 0.250
0.125 0.375 0.312 0.188
0.000 0.000 1.000 0.000
0.250 0.188 0.500 0.062
0.188 0.062 0.750 0.000
0.000 0.188 0.812 0.000