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Details for NP_441917.1_2

Name NP_441917.1_2
Length 19
Regular expression [GA][AG]T[AG][GC][CG][AC]ATG[CG][TG][CGA][TG][AG]G[GT][GTA][GA]
Central Yes

Motif logo

Genes containing this motif

110 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1064 Reverse -273 -291 6.214 0.288
slr0240 Reverse -146 -164 6.60732 0.288
sll1032 Forward -331 -313 5.42735 0.288
sll1027 Forward -153 -135 4.54237 0.288
slr1109 Reverse -126 -144 4.54237 0.288
slr1795 Reverse -252 -270 4.44404 0.294
sll1663 Reverse -67 -85 9.45892 0.256
sll1659 Reverse -318 -336 6.70565 0.288
sll1655 Reverse -199 -217 7.09898 0.288
ssr1765 Reverse -313 -331 4.83737 0.288
sll1020 Reverse -339 -357 7.19731 0.288
slr0686 Forward -224 -206 16.8337 0.152
slr0687 Forward -335 -317 12.7038 0.168
sll1749a Forward -304 -286 4.73903 0.288
slr1851 Reverse -290 -308 4.73903 0.288
sll1946 Reverse -245 -263 4.6407 0.288
slr2045 Forward -398 -380 4.83737 0.288
slr2047 Forward -111 -93 5.72234 0.288
slr2053 Forward -293 -275 8.67227 0.28
sll0981 Reverse -327 -345 7.29564 0.288
sll0981 Reverse -215 -233 5.52568 0.288
slr1392 Reverse -71 -89 6.01734 0.288
ssr3410 Forward -87 -69 5.62401 0.288
slr2011 Forward -352 -334 5.62401 0.288
sll1821 Forward -266 -248 10.7372 0.219
ssr2009 Forward -112 -94 6.214 0.288
sll1968 Forward -395 -377 5.32902 0.288
sll1736 Forward -132 -114 5.42735 0.288
sll1457 Forward -236 -218 6.31233 0.288
sll1634 Forward -224 -206 5.13236 0.288
slr1751 Reverse -231 -249 14.2771 0.152
sll0863 Reverse -245 -263 7.98396 0.287
slr1875 Reverse -312 -330 6.31233 0.288
slr1879 Reverse -257 -275 7.98396 0.287
sll1760 Forward -152 -134 14.3755 0.152
slr1880 Reverse -108 -126 14.3755 0.152
slr1812 Reverse -159 -177 5.72234 0.288
slr0852 Reverse -118 -136 7.29564 0.288
sll0847 Reverse -191 -209 8.18062 0.287
slr1998 Forward -104 -86 11.5239 0.196
slr2082 Forward -334 -316 5.52568 0.288
slr2095 Reverse -108 -126 6.11567 0.288
ssr2549 Forward -199 -181 4.9357 0.288
slr2128 Reverse -169 -187 5.52568 0.288
sll0813 Forward -382 -364 8.86894 0.279
slr1342 Forward -245 -227 7.19731 0.288
slr1977 Forward -373 -355 4.6407 0.288
sll1873 Forward -186 -168 8.57394 0.28
sll1378 Reverse -120 -138 4.6407 0.288
slr1288 Forward -261 -243 16.0471 0.152
sll1439 Reverse -321 -339 4.9357 0.288
slr1531 Forward -139 -121 4.9357 0.288
slr1533 Forward -374 -356 6.41066 0.288
slr1678 Forward -347 -329 6.01734 0.288
ssr2802 Forward -368 -350 11.0322 0.213
sll0921 Reverse -10 -28 6.01734 0.288
slr0937 Reverse -304 -322 14.9655 0.152
slr0937 Reverse -32 -50 7.19731 0.288
sll0912 Reverse -310 -328 13.0972 0.168
slr1622 Reverse -80 -98 9.85225 0.249
sll0273 Reverse -303 -321 6.90232 0.288
sll0269 Reverse -23 -41 6.90232 0.288
sll0136 Reverse -301 -319 8.47561 0.28
sll1853 Forward -271 -253 22.5369 0.0693
slr0333 Reverse -182 -200 4.83737 0.288
sll0171 Reverse -295 -313 5.82068 0.288
sll0160 Reverse -282 -300 7.78729 0.288
slr0361 Reverse -348 -366 9.55725 0.256
slr0361 Forward -143 -125 9.0656 0.274
slr0769 Forward -332 -314 4.83737 0.288
sll0767 Forward -391 -373 15.6538 0.152
ssl1426 Forward -47 -29 15.6538 0.152
slr0347 Reverse -193 -211 5.42735 0.288
sll0021 Forward -173 -155 13.4905 0.168
sll0416 Forward -294 -276 7.4923 0.288
slr0438 Forward -162 -144 13.0972 0.168
slr0067 Forward -243 -225 6.90232 0.288
sll0459 Forward -371 -353 4.54237 0.288
slr0487 Reverse -107 -125 5.62401 0.288
sll0681 Reverse -283 -301 12.4089 0.168
slr0633 Forward -210 -192 5.13236 0.288
sll0373 Forward -326 -308 5.23069 0.288
slr0199 Forward -168 -150 12.5072 0.168
ssl0353 Forward -264 -246 5.91901 0.288
slr0896 Reverse -158 -176 6.60732 0.288
sll0830 Forward -370 -352 13.4905 0.168
slr0072 Reverse -75 -93 7.39397 0.288
slr0086 Forward -210 -192 8.08229 0.287
slr0092 Reverse -289 -307 5.42735 0.288
slr0505 Forward -399 -381 7.4923 0.288
ssr0871 Reverse -167 -185 5.42735 0.288
slr0511 Reverse -381 -399 5.42735 0.288
sll0107 Forward -128 -110 5.13236 0.288
sll0290 Reverse -9 -27 5.82068 0.288
sll0664 Forward -294 -276 7.4923 0.288
sll0041 Forward -318 -300 4.83737 0.288
slr0534 Reverse -381 -399 4.54237 0.288
sll0505 Reverse -172 -190 12.7038 0.168
slr0557 Forward -355 -337 6.50899 0.288
sll0522 Forward -269 -251 15.2604 0.152
slr0655 Reverse -257 -275 6.41066 0.288
sll1485 Reverse -368 -386 5.03403 0.288
slr0755 Reverse -201 -219 11.7205 0.195
sll1550 Forward -82 -64 6.214 0.288
sll0441 Forward -293 -275 6.01734 0.288
slr1179 Reverse -114 -132 5.82068 0.288
sll1109 Reverse -189 -207 10.5406 0.22
slr0585 Reverse -372 -390 15.2604 0.152
slr0597 Reverse -137 -155 5.32902 0.288
slr0606 Reverse -261 -279 4.83737 0.288
ssl7039 Forward -183 -165 4.54237 0.288
slr7041 Reverse -177 -195 4.54237 0.288
ssl8003 Forward -348 -330 5.42735 0.288
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.200  0.000  0.800  0.000  
0.800 0.000 0.200 0.000
0.000 0.000 0.000 1.000
0.600 0.000 0.400 0.000
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0.800 0.200 0.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.600 0.400 0.000
0.000 0.000 0.200 0.800
0.200 0.400 0.400 0.000
0.000 0.000 0.200 0.800
0.600 0.000 0.400 0.000
0.000 0.000 1.000 0.000
0.000 0.000 0.800 0.200
0.200 0.000 0.400 0.400
0.200 0.000 0.800 0.000