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Details for NP_441877.1_5

Name NP_441877.1_5
Length 20
Regular expression GG[TC]AAA[GC]TTT[GC]CCA[TAC]GCTT[GT]
Central No

Motif logo

Genes containing this motif

306 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Reverse -201 -220 -0.787193 0.282
sll1213 Reverse -28 -47 0.0977854 0.276
sll1400 Forward -331 -312 5.99764 0.195
ssl2733 Forward -104 -85 5.99764 0.195
slr1115 Reverse -15 -34 0.884433 0.276
slr1118 Forward -371 -352 1.47442 0.276
sll1054 Forward -263 -244 2.16274 0.253
sll1052 Forward -242 -223 6.68596 0.195
sll1052 Reverse -211 -230 0.58944 0.276
slr1127 Forward -204 -185 0.392778 0.276
sll1045 Reverse -345 -364 -2.16383 0.296
sll1043 Reverse -237 -256 -0.295539 0.276
sll1043 Forward -268 -249 -1.67217 0.289
sll0704 Forward -121 -102 -1.67217 0.289
slr0732 Reverse -55 -74 -1.67217 0.289
slr0734 Forward -349 -330 -1.27885 0.283
slr0252 Reverse -133 -152 1.76941 0.274
sll1041 Forward -74 -55 9.63589 0.151
sll1041 Reverse -234 -253 2.26107 0.253
slr1096 Forward -56 -37 0.196116 0.276
slr1100 Forward -111 -92 -1.47551 0.286
sll1032 Forward -202 -183 -0.885524 0.283
sll1029 Forward -332 -313 5.60432 0.195
sll1669 Forward -278 -259 -1.27885 0.283
sll1667 Reverse -263 -282 6.98095 0.195
sll1666 Reverse -105 -124 -1.08219 0.283
sll1665 Forward -260 -241 4.62101 0.211
slr1799 Forward -217 -198 -0.000545616 0.276
slr1800 Forward -80 -61 -2.16383 0.296
slr1302 Forward -281 -262 -0.0988766 0.276
slr0967 Reverse -184 -203 1.37609 0.276
sll0939 Reverse -304 -323 11.2092 0.124
sll0936 Forward -261 -242 1.0811 0.276
sll0932 Forward -30 -11 4.03102 0.233
slr0984 Reverse -62 -81 -1.18052 0.283
slr1617 Reverse -182 -201 -2.26216 0.298
slr1067 Forward -208 -189 -2.16383 0.296
sll1024 Reverse -133 -152 0.491109 0.276
sll1018 Forward -74 -55 -0.885524 0.283
sll1018 Reverse -53 -72 -1.47551 0.286
slr0678 Forward -101 -82 0.0977854 0.276
sll0640 Reverse -247 -266 -1.67217 0.289
slr1600 Reverse -335 -354 -1.57384 0.287
ssr2708 Reverse -378 -397 11.2092 0.124
ssr2708 Forward -231 -212 -0.39387 0.276
sll1006 Reverse -222 -241 3.93269 0.234
slr1762 Forward -336 -317 3.44104 0.236
slr1848 Reverse -246 -265 -0.4922 0.276
sll1946 Forward -161 -142 4.42435 0.212
slr2038 Reverse -103 -122 12.3892 0.124
sll1931 Reverse -300 -319 6.09597 0.195
sll0995 Reverse -30 -49 -0.39387 0.276
sll1300 Forward -256 -237 7.47261 0.192
slr1385 Reverse -73 -92 11.3075 0.124
sll1296 Reverse -276 -295 0.786102 0.276
sll1285 Reverse -356 -375 -1.57384 0.287
ssr2843 Forward -213 -194 -0.295539 0.276
slr1708 Reverse -31 -50 1.0811 0.276
slr2012 Reverse -163 -182 5.50599 0.195
sll1920 Reverse -213 -232 1.86774 0.269
slr2025 Reverse -123 -142 -1.7705 0.29
slr2027 Reverse -364 -383 -2.16383 0.296
ssl3615 Reverse -287 -306 12.2908 0.124
slr1133 Forward -139 -120 -1.96717 0.292
slr1138 Reverse -202 -221 0.884433 0.276
ssl2084 Reverse -141 -160 2.26107 0.253
ssl3446 Reverse -239 -258 3.6377 0.234
ssl3445 Reverse -334 -353 0.687771 0.276
sll1821 Forward -131 -112 6.58763 0.195
sll1808 Reverse -125 -144 3.6377 0.234
slr1201 Reverse -127 -146 0.0977854 0.276
slr1214 Forward -339 -320 2.26107 0.253
slr1214 Reverse -364 -383 2.16274 0.253
slr1214 Forward -386 -367 -0.885524 0.283
slr1215 Reverse -340 -359 -0.688862 0.279
slr2074 Forward -144 -125 0.786102 0.276
slr1839 Forward -158 -139 0.687771 0.276
slr1543 Forward -244 -225 4.52268 0.211
slr1543 Forward -60 -41 0.294447 0.276
sll1634 Forward -119 -100 3.04771 0.237
slr1748 Reverse -97 -116 3.04771 0.237
slr1748 Forward -283 -264 -0.885524 0.283
sll1138 Reverse -339 -358 -1.47551 0.286
slr1226 Forward -396 -377 -0.000545616 0.276
ssr2049 Reverse -169 -188 13.6675 0.124
slr1234 Forward -130 -111 2.85105 0.243
slr1235 Forward -324 -305 -1.08219 0.283
slr1235 Reverse -376 -395 -1.67217 0.289
sll1131 Forward -270 -251 -0.197208 0.276
slr1237 Forward -197 -178 2.16274 0.253
sll1130 Forward -98 -79 0.786102 0.276
sll1129 Forward -277 -258 3.53937 0.234
ssr2061 Reverse -128 -147 3.53937 0.234
slr1238 Reverse -205 -224 3.34271 0.237
sll1358 Reverse -279 -298 1.67108 0.276
sll1352 Forward -39 -20 9.0459 0.151
slr1448 Reverse -171 -190 9.0459 0.151
sll1348 Reverse -90 -109 -1.18052 0.283
slr1363 Reverse -182 -201 -0.590531 0.276
sll1271 Forward -155 -136 -1.18052 0.283
sll0868 Reverse -218 -237 4.03102 0.233
sll0864 Forward -85 -66 -0.688862 0.279
sll0862 Reverse -293 -312 2.94938 0.241
slr1407 Reverse -1 -20 0.392778 0.276
sll1305 Forward -224 -205 5.40766 0.198
sll1785 Forward -186 -167 5.211 0.2
sll1783 Reverse -311 -330 -1.18052 0.283
slr1852 Forward -173 -154 -1.18052 0.283
ssr3184 Reverse -155 -174 6.4893 0.195
slr1881 Forward -24 -5 -2.16383 0.296
slr1886 Reverse -136 -155 1.27776 0.276
slr1886 Forward -85 -66 -1.47551 0.286
sll2011 Forward -192 -173 -1.37718 0.285
sll1704 Forward -353 -334 -1.96717 0.292
sll1696 Reverse -339 -358 3.53937 0.234
sll1629 Forward -273 -254 1.27776 0.276
sll1626 Forward -314 -295 2.26107 0.253
sll1625 Reverse -348 -367 -1.86883 0.291
slr1744 Forward -206 -187 -0.39387 0.276
sll0857 Reverse -345 -364 5.70265 0.195
slr0868 Reverse -347 -366 0.0977854 0.276
sll1162 Reverse -200 -219 -0.0988766 0.276
slr1261 Reverse -83 -102 2.3594 0.253
ssl3692 Forward -224 -205 -1.57384 0.287
slr1994 Forward -360 -341 5.80098 0.195
slr1994 Reverse -348 -367 -1.37718 0.285
sll1905 Forward -83 -64 -1.86883 0.291
ssr3402 Forward -385 -366 6.39097 0.195
sll0248 Forward -364 -345 -1.18052 0.283
sll0247 Reverse -146 -165 -1.27885 0.283
slr0267 Forward -364 -345 -1.27885 0.283
ssr3532 Forward -241 -222 2.75272 0.247
sll1982 Forward -396 -377 0.392778 0.276
sll1979 Forward -214 -195 8.45592 0.155
slr2094 Reverse -23 -42 8.45592 0.155
slr2097 Reverse -108 -127 6.09597 0.195
slr2099 Reverse -200 -219 4.71934 0.211
slr2103 Reverse -292 -311 -0.0988766 0.276
sll1973 Reverse -348 -367 -2.26216 0.298
sll1427 Forward -306 -287 -2.16383 0.296
ssr2554 Reverse -180 -199 5.80098 0.195
slr2115 Forward -103 -84 0.58944 0.276
slr2116 Forward -318 -299 1.27776 0.276
sll1237 Reverse -333 -352 0.687771 0.276
sll1233 Reverse -166 -185 5.211 0.2
sll1222 Reverse -151 -170 5.30933 0.2
sll1220 Forward -214 -195 8.75091 0.151
sll1219 Forward -269 -250 5.80098 0.195
sll0810 Reverse -323 -342 8.75091 0.151
sll1262 Reverse -132 -151 1.57275 0.276
sll1260 Forward -51 -32 0.58944 0.276
slr1350 Reverse -69 -88 -0.39387 0.276
sll1242 Forward -90 -71 1.57275 0.276
slr1956 Reverse -43 -62 1.57275 0.276
slr1958 Reverse -249 -268 5.89931 0.195
sll1892 Reverse -88 -107 0.982764 0.276
slr1968 Forward -55 -36 0.982764 0.276
sll1874 Forward -90 -71 0.491109 0.276
sll1874 Forward -299 -280 -1.18052 0.283
sll1869 Forward -261 -242 3.14605 0.237
slr1467 Forward -172 -153 5.70265 0.195
slr1471 Reverse -18 -37 15.7324 0.124
sll1384 Reverse -208 -227 -0.4922 0.276
sll1377 Forward -221 -202 -2.26216 0.298
sll1371 Forward -286 -267 9.3409 0.151
sll1181 Reverse -336 -355 -0.39387 0.276
sll1169 Forward -133 -114 16.7157 0.124
slr1160 Reverse -345 -364 3.14605 0.237
slr1160 Forward -393 -374 0.491109 0.276
slr1169 Forward -330 -311 4.916 0.211
slr1169 Forward -289 -270 -0.0988766 0.276
sll1089 Forward -239 -220 3.53937 0.234
slr1174 Forward -142 -123 -1.86883 0.291
slr1677 Forward -137 -118 3.04771 0.237
slr1677 Reverse -53 -72 -1.37718 0.285
sll1562 Forward -234 -215 -1.57384 0.287
sll1553 Forward -223 -204 7.37428 0.192
slr1697 Reverse -61 -80 7.37428 0.192
sll0920 Reverse -253 -272 0.687771 0.276
slr0938 Reverse -316 -335 12.7825 0.124
sll0913 Reverse -134 -153 -1.08219 0.283
slr0960 Reverse -243 -262 -0.0988766 0.276
sll1535 Reverse -230 -249 2.45773 0.253
slr1639 Forward -288 -269 0.294447 0.276
sll1524 Forward -308 -289 1.17943 0.276
slr1644 Reverse -17 -36 1.17943 0.276
sll0361 Forward -291 -272 0.392778 0.276
ssr0657 Reverse -206 -225 2.65439 0.249
sll0355 Forward -108 -89 6.09597 0.195
slr0165 Reverse -214 -233 1.27776 0.276
slr1951 Forward -96 -77 3.73603 0.234
slr0992 Forward -373 -354 3.44104 0.236
sll0301 Reverse -14 -33 -0.787193 0.282
slr0335 Forward -323 -304 3.04771 0.237
ssl0312 Reverse -331 -350 0.786102 0.276
ssl0312 Reverse -330 -349 -1.86883 0.291
slr0364 Forward -296 -277 6.98095 0.195
slr0381 Forward -147 -128 7.86593 0.18
slr0384 Reverse -327 -346 -2.26216 0.298
slr0388 Reverse -347 -366 10.2259 0.141
slr0769 Forward -338 -319 -0.295539 0.276
slr0343 Forward -69 -50 -1.47551 0.286
slr0358 Reverse -102 -121 -2.16383 0.296
slr0001 Forward -293 -274 0.982764 0.276
slr0014 Forward -180 -161 5.01433 0.209
sll0010 Reverse -215 -234 -1.57384 0.287
slr0019 Forward -247 -228 -1.57384 0.287
sll0005 Reverse -48 -67 -1.08219 0.283
slr0020 Forward -140 -121 -1.08219 0.283
ssr0349 Reverse -107 -126 6.4893 0.195
sll0204 Forward -63 -44 8.94757 0.151
slr0222 Reverse -74 -93 8.94757 0.151
slr0431 Reverse -367 -386 -0.590531 0.276
slr0431 Reverse -198 -217 -1.7705 0.29
ssl0787 Reverse -272 -291 -0.39387 0.276
sll0405 Reverse -292 -311 14.0608 0.124
slr0051 Forward -193 -174 2.85105 0.243
sll0068 Reverse -125 -144 -2.26216 0.298
sll0064 Forward -143 -124 3.83436 0.234
slr0474 Reverse -74 -93 2.65439 0.249
slr0477 Reverse -278 -297 0.491109 0.276
slr0493 Reverse -222 -241 0.58944 0.276
sll0454 Forward -160 -141 0.196116 0.276
sll0454 Reverse -302 -321 -0.295539 0.276
sll0395 Forward -375 -356 4.42435 0.212
sll0394 Forward -354 -335 -0.787193 0.282
slr0415 Forward -307 -288 -1.18052 0.283
sll0377 Forward -44 -25 -0.197208 0.276
sll0376 Forward -204 -185 0.0977854 0.276
sll0188 Reverse -292 -311 -0.39387 0.276
sll0184 Reverse -181 -200 -0.590531 0.276
slr0201 Forward -126 -107 -0.590531 0.276
sll0182 Forward -383 -364 15.1424 0.124
slr0209 Forward -24 -5 -0.39387 0.276
slr0896 Forward -140 -121 -0.688862 0.279
slr0902 Reverse -292 -311 -1.37718 0.285
ssr1527 Reverse -363 -382 6.68596 0.195
slr0904 Forward -67 -48 -2.26216 0.298
slr0915 Reverse -81 -100 0.884433 0.276
slr0917 Forward -250 -231 4.52268 0.211
slr0922 Reverse -360 -379 7.07928 0.195
sll0556 Reverse -38 -57 4.62101 0.211
sll0829 Reverse -367 -386 -2.0655 0.296
slr0845 Forward -266 -247 5.50599 0.195
slr0073 Reverse -254 -273 -0.590531 0.276
slr0093 Forward -61 -42 14.7491 0.124
sll0487 Forward -175 -156 5.50599 0.195
slr0506 Reverse -32 -51 11.1109 0.124
sll0587 Forward -319 -300 3.14605 0.237
sll0587 Reverse -317 -336 2.3594 0.253
sll0584 Forward -387 -368 -1.96717 0.292
sll0103 Reverse -300 -319 3.34271 0.237
sll0098 Reverse -149 -168 5.80098 0.195
sll0098 Reverse -246 -265 1.0811 0.276
slr0108 Forward -89 -70 5.80098 0.195
slr0120 Forward -22 -3 13.7658 0.124
sll0282 Reverse -186 -205 2.0644 0.257
slr0793 Forward -240 -221 4.62101 0.211
sll0793 Forward -117 -98 -1.7705 0.29
sll0777 Reverse -238 -257 -1.47551 0.286
slr0712 Forward -387 -368 0.58944 0.276
sll0738 Reverse -371 -390 15.9291 0.124
sll0738 Reverse -134 -153 3.53937 0.234
slr0033 Forward -62 -43 2.16274 0.253
slr0033 Reverse -171 -190 0.491109 0.276
sll0037 Reverse -169 -188 -2.16383 0.296
sll0031 Reverse -305 -324 -1.7705 0.29
slr0038 Forward -154 -135 -1.7705 0.29
slr0039 Forward -396 -377 -0.39387 0.276
slr0043 Reverse -317 -336 11.3075 0.124
slr0527 Forward -221 -202 -1.27885 0.283
sll0513 Forward -62 -43 -0.295539 0.276
slr0533 Reverse -127 -146 -0.295539 0.276
slr0537 Forward -327 -308 -0.197208 0.276
sll0896 Reverse -27 -46 1.17943 0.276
slr0546 Forward -32 -13 2.45773 0.253
sll1343 Reverse -2 -21 -0.885524 0.283
sll0631 Forward -67 -48 2.16274 0.253
slr0657 Reverse -272 -291 -1.7705 0.29
sll0625 Reverse -226 -245 -0.688862 0.279
sll1499 Reverse -350 -369 -0.0988766 0.276
slr1556 Forward -366 -347 -0.0988766 0.276
slr1563 Reverse -240 -259 3.53937 0.234
sll1482 Forward -124 -105 2.3594 0.253
sll1481 Reverse -111 -130 -0.4922 0.276
sll1474 Reverse -175 -194 0.0977854 0.276
sll0735 Reverse -77 -96 11.8975 0.124
slr0748 Forward -89 -70 11.8975 0.124
sll0728 Forward -367 -348 0.491109 0.276
sll0728 Reverse -282 -301 -1.18052 0.283
slr1653 Forward -60 -41 1.17943 0.276
slr1657 Forward -320 -301 -1.27885 0.283
slr1660 Forward -165 -146 5.80098 0.195
slr1660 Forward -115 -96 -0.4922 0.276
ssr2781 Forward -46 -27 0.786102 0.276
sll0449 Reverse -83 -102 -0.000545616 0.276
sll0430 Forward -145 -126 -0.590531 0.276
slr1176 Reverse -186 -205 -0.590531 0.276
sll0572 Reverse -71 -90 -2.16383 0.296
slr0592 Forward -237 -218 -2.16383 0.296
sll0567 Forward -342 -323 9.0459 0.151
sll0567 Reverse -320 -339 1.37609 0.276
slr0607 Forward -339 -320 9.53756 0.151
slr0609 Reverse -110 -129 1.27776 0.276
ssl5015 Reverse -358 -377 0.294447 0.276
ssl5025 Forward -266 -247 -1.86883 0.291
sll5033 Reverse -295 -314 -0.4922 0.276
sll5057 Forward -179 -160 -1.86883 0.291
sll5079 Forward -358 -339 3.53937 0.234
sll5084 Forward -191 -172 -1.96717 0.292
ssl5091 Forward -269 -250 -1.18052 0.283
ssr5092 Reverse -103 -122 -1.18052 0.283
sll5097 Forward -376 -357 4.71934 0.211
ssl5098 Forward -105 -86 4.71934 0.211
sll7034 Forward -196 -177 10.8159 0.124
ssr7035 Reverse -257 -276 10.8159 0.124
ssl7053 Reverse -61 -80 -0.000545616 0.276
slr7060 Reverse -50 -69 3.24438 0.237
sll7089 Reverse -235 -254 -1.37718 0.285
sll8001 Reverse -69 -88 0.196116 0.276
sll8018 Reverse -165 -184 6.78429 0.195
ssl8039 Reverse -216 -235 -0.590531 0.276
ssr6048 Reverse -239 -258 -2.16383 0.296
sll6060 Reverse -287 -306 -1.18052 0.283
ssl6061 Reverse -47 -66 -1.18052 0.283
ssr6062 Forward -269 -250 -1.18052 0.283
6803t07 Reverse -252 -271 -1.86883 0.291
6803t25 Forward -102 -83 1.17943 0.276
6803t34 Reverse -26 -45 0.884433 0.276
sllt43 Forward -139 -120 4.52268 0.211
6803r02 Reverse -113 -132 -1.96717 0.292
6803r05 Reverse -113 -132 -1.96717 0.292
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 0.125 0.875 0.000
0.125 0.250 0.000 0.625
1.000 0.000 0.000 0.000
0.875 0.000 0.125 0.000
0.875 0.000 0.125 0.000
0.000 0.250 0.625 0.125
0.125 0.125 0.000 0.750
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.375 0.500 0.125
0.000 0.875 0.125 0.000
0.000 1.000 0.000 0.000
0.875 0.000 0.000 0.125
0.250 0.250 0.125 0.375
0.000 0.000 1.000 0.000
0.000 0.875 0.125 0.000
0.125 0.000 0.000 0.875
0.000 0.000 0.000 1.000
0.000 0.000 0.750 0.250