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Details for NP_441874.1_1

Name NP_441874.1_1
Length 15
Regular expression C[TA]T[TG]G[AG][GAC][CT][TA][CG]GGGGA
Central No

Motif logo

Genes containing this motif

316 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1493 Forward -142 -128 10.4227 0.261
sll1401 Forward -350 -336 8.65272 0.298
slr1116 Forward -54 -40 12.586 0.24
slr0722 Reverse -134 -148 15.5359 0.165
sll0703 Reverse -349 -363 15.3392 0.165
sll0703 Reverse -142 -156 14.8476 0.173
sll0703 Forward -378 -364 10.226 0.261
sll0696 Forward -338 -324 9.43936 0.277
slr0250 Forward -168 -154 12.291 0.24
ssl0410 Reverse -48 -62 11.0127 0.25
sml0004 Forward -381 -367 10.7177 0.26
sll0220 Reverse -170 -184 10.4227 0.261
sll1326 Reverse -240 -254 12.6843 0.24
sll1325 Reverse -272 -286 9.04604 0.28
slr1414 Forward -161 -147 8.65272 0.298
sll1041 Reverse -129 -143 13.2743 0.218
slr1101 Forward -384 -370 8.55439 0.298
sll1035 Reverse -44 -58 9.14437 0.277
slr1106 Forward -191 -177 9.14437 0.277
sll1031 Reverse -283 -297 9.14437 0.277
slr1772 Forward -215 -201 9.34103 0.277
slr1778 Reverse -317 -331 8.55439 0.298
sll1671 Forward -192 -178 12.291 0.24
slr1790 Reverse -150 -164 12.291 0.24
sll1669 Forward -369 -355 9.93102 0.265
slr1795 Forward -164 -150 10.7177 0.26
slr1800 Reverse -213 -227 10.3243 0.261
sll1655 Reverse -34 -48 9.93102 0.265
slr1293 Reverse -384 -398 11.0127 0.25
slr1293 Reverse -307 -321 10.816 0.26
slr1303 Reverse -372 -386 19.1741 0.149
sll1187 Forward -145 -131 8.94771 0.285
sll1185 Reverse -260 -274 9.04604 0.28
slr0966 Forward -357 -343 13.9626 0.208
slr0967 Reverse -77 -91 16.3225 0.165
sll0926 Forward -273 -259 8.75105 0.294
slr1616 Forward -217 -203 8.65272 0.298
slr1079 Forward -318 -304 14.8476 0.173
slr1087 Reverse -202 -216 17.8958 0.165
sll1022 Reverse -308 -322 17.8958 0.165
sll0654 Reverse -215 -229 9.14437 0.277
slr0676 Forward -112 -98 9.14437 0.277
slr0679 Reverse -167 -181 8.45605 0.298
slr0680 Reverse -251 -265 11.6026 0.24
sll0638 Reverse -43 -57 9.14437 0.277
slr0692 Forward -135 -121 9.14437 0.277
slr1594 Forward -112 -98 12.1926 0.24
sll1509 Reverse -69 -83 9.14437 0.277
slr1599 Forward -297 -283 9.14437 0.277
slr1603 Forward -247 -233 8.75105 0.294
ssr2699 Reverse -245 -259 15.3392 0.165
sll1504 Reverse -135 -149 12.0943 0.24
ssr2708 Forward -315 -301 11.996 0.24
sll1004 Reverse -16 -30 11.111 0.249
ssl1922 Reverse -360 -374 11.0127 0.25
ssl1920 Reverse -172 -186 11.0127 0.25
slr1763 Reverse -213 -227 15.7325 0.165
sll1642 Reverse -158 -172 9.93102 0.265
slr1764 Forward -49 -35 9.93102 0.265
slr2044 Forward -140 -126 9.43936 0.277
slr1913 Forward -62 -48 17.9942 0.165
slr1913 Reverse -158 -172 8.84938 0.29
slr1916 Reverse -140 -154 12.9793 0.227
sll0998 Forward -298 -284 9.34103 0.277
slr1019 Reverse -323 -337 9.34103 0.277
slr1022 Reverse -318 -332 10.521 0.261
slr2011 Reverse -174 -188 19.2725 0.149
slr2024 Reverse -201 -215 8.45605 0.298
sll1913 Forward -140 -126 14.8476 0.173
sll1911 Forward -174 -160 12.586 0.24
slr1134 Reverse -25 -39 15.4376 0.165
slr1136 Forward -313 -299 8.45605 0.298
sll1080 Forward -342 -328 11.6026 0.24
sll1078 Forward -256 -242 8.45605 0.298
sll1076 Forward -115 -101 10.816 0.26
slr1147 Reverse -321 -335 11.701 0.24
sll1822 Reverse -83 -97 15.8309 0.165
sll1816 Reverse -104 -118 9.04604 0.28
sll1814 Forward -210 -196 14.2576 0.196
sll1806 Reverse -177 -191 9.43936 0.277
sll1803 Forward -229 -215 8.84938 0.29
slr1900 Forward -333 -319 9.73436 0.276
slr1901 Forward -70 -56 12.0943 0.24
sll1124 Reverse -280 -294 9.2427 0.277
sll1744 Forward -57 -43 16.8142 0.165
sll1743 Forward -270 -256 12.0943 0.24
sll1742 Reverse -19 -33 16.1259 0.165
ssl3335 Forward -66 -52 11.3077 0.249
sll1736 Reverse -178 -192 10.7177 0.26
sll1712 Forward -186 -172 8.75105 0.294
slr1535 Reverse -281 -295 11.2093 0.249
slr1546 Forward -360 -346 13.4709 0.213
sll1461 Forward -152 -138 16.7159 0.165
slr1552 Forward -201 -187 14.7492 0.173
sll1633 Forward -139 -125 11.5043 0.243
slr1220 Forward -28 -14 9.63603 0.277
sll1142 Reverse -183 -197 15.1426 0.173
sll1142 Forward -323 -309 10.521 0.261
sll1131 Reverse -357 -371 8.94771 0.285
slr1440 Forward -400 -386 8.45605 0.298
sll1358 Reverse -187 -201 8.45605 0.298
sll0877 Reverse -336 -350 18.8791 0.149
sll0872 Forward -104 -90 9.34103 0.277
slr0882 Reverse -50 -64 9.34103 0.277
sll0869 Forward -295 -281 9.63603 0.277
sll1780 Forward -120 -106 10.6193 0.26
sll1772 Forward -348 -334 10.0294 0.265
sll1760 Reverse -111 -125 9.93102 0.265
slr1880 Forward -149 -135 9.93102 0.265
sll2005 Reverse -81 -95 10.3243 0.261
sll1708 Reverse -259 -273 15.4376 0.165
sll1695 Reverse -139 -153 11.6026 0.24
sll1694 Forward -103 -89 16.4209 0.165
slr1735 Reverse -272 -286 9.04604 0.28
slr0853 Reverse -182 -196 16.4209 0.165
sll0858 Forward -176 -162 8.45605 0.298
sll0854 Forward -299 -285 9.34103 0.277
sll0851 Forward -341 -327 8.45605 0.298
slr0861 Forward -243 -229 9.83269 0.27
sll0843 Forward -279 -265 8.45605 0.298
slr0868 Reverse -78 -92 14.7492 0.173
sll1159 Reverse -351 -365 11.8976 0.24
slr1245 Forward -218 -204 11.8976 0.24
sll1151 Forward -326 -312 9.04604 0.28
ssr2087 Forward -175 -161 9.83269 0.27
slr1254 Reverse -173 -187 8.84938 0.29
slr1262 Forward -272 -258 14.5526 0.178
slr2058 Forward -287 -273 11.3077 0.249
sll1950 Reverse -293 -307 16.6175 0.165
sll1908 Forward -214 -200 9.5377 0.277
slr1990 Reverse -47 -61 9.5377 0.277
sll1600 Forward -216 -202 10.0294 0.265
sll1598 Reverse -54 -68 8.55439 0.298
ssr2898 Forward -90 -76 8.55439 0.298
ssl0467 Forward -387 -373 13.4709 0.213
sll0241 Reverse -20 -34 8.45605 0.298
sll1987 Reverse -338 -352 11.2093 0.249
sll1981 Reverse -316 -330 11.996 0.24
slr2102 Reverse -345 -359 13.2743 0.218
sll1424 Forward -370 -356 10.0294 0.265
slr1510 Forward -252 -238 12.586 0.24
slr1511 Reverse -76 -90 10.3243 0.261
slr1516 Reverse -290 -304 8.75105 0.294
slr2127 Reverse -35 -49 9.5377 0.277
slr1324 Reverse -183 -197 8.55439 0.298
sll1234 Reverse -187 -201 10.3243 0.261
ssr2201 Forward -94 -80 10.3243 0.261
slr1327 Forward -302 -288 10.3243 0.261
sll1231 Reverse -60 -74 9.5377 0.277
ssl2420 Forward -268 -254 8.75105 0.294
sll1222 Forward -129 -115 11.2093 0.249
slr0810 Reverse -195 -209 10.7177 0.26
sll1262 Forward -300 -286 8.75105 0.294
sll1253 Reverse -280 -294 9.43936 0.277
slr1348 Forward -344 -330 15.4376 0.165
slr1964 Reverse -217 -231 9.04604 0.28
sll1894 Forward -397 -383 10.7177 0.26
sll1893 Reverse -254 -268 9.14437 0.277
sll1873 Forward -181 -167 15.8309 0.165
slr1984 Reverse -274 -288 9.5377 0.277
sll1386 Reverse -176 -190 11.406 0.249
sll1381 Forward -346 -332 17.4042 0.165
slr1476 Forward -343 -329 9.63603 0.277
sll1173 Forward -133 -119 11.7993 0.24
slr1278 Forward -269 -255 12.1926 0.24
slr1288 Reverse -299 -313 15.4376 0.165
sll1435 Forward -177 -163 9.34103 0.277
sll1435 Reverse -53 -67 8.45605 0.298
sll1433 Forward -323 -309 10.4227 0.261
ssl2162 Reverse -218 -232 16.0275 0.165
sll1103 Forward -187 -173 15.4376 0.165
slr1159 Reverse -187 -201 9.43936 0.277
slr1165 Reverse -213 -227 15.8309 0.165
sll1555 Reverse -218 -232 13.6676 0.211
ssr2831 Forward -360 -346 13.6676 0.211
sll0920 Reverse -154 -168 11.8976 0.24
slr0952 Reverse -266 -280 9.93102 0.265
sll1537 Reverse -22 -36 10.521 0.261
sll1535 Forward -352 -338 8.45605 0.298
slr1635 Forward -369 -355 19.8624 0.149
slr1646 Forward -358 -344 9.43936 0.277
sll0426 Forward -255 -241 11.8976 0.24
sll0271 Reverse -42 -56 9.14437 0.277
slr0280 Reverse -297 -311 16.6175 0.165
sll0264 Reverse -107 -121 11.2093 0.249
slr0293 Reverse -292 -306 8.94771 0.285
sll0362 Reverse -201 -215 13.8643 0.208
sll0356 Forward -204 -190 13.6676 0.211
sll0355 Forward -399 -385 10.7177 0.26
slr0145 Forward -309 -295 8.84938 0.29
slr0151 Forward -380 -366 10.6193 0.26
slr0152 Forward -304 -290 18.6825 0.149
slr0152 Reverse -6 -20 9.43936 0.277
sll0136 Reverse -84 -98 18.1908 0.165
slr1001 Forward -254 -240 15.3392 0.165
ssr0256 Reverse -36 -50 15.3392 0.165
slr0166 Reverse -211 -225 15.3392 0.165
slr1925 Forward -186 -172 9.14437 0.277
ssr3300 Reverse -67 -81 10.4227 0.261
slr0992 Forward -128 -114 14.8476 0.173
sll0947 Reverse -189 -203 9.34103 0.277
slr0994 Forward -258 -244 9.34103 0.277
slr0320 Forward -146 -132 15.4376 0.165
slr0322 Forward -262 -248 9.04604 0.28
slr0168 Forward -244 -230 10.7177 0.26
sll0177 Reverse -280 -294 8.84938 0.29
sll0172 Forward -177 -163 17.6008 0.165
sll0171 Forward -96 -82 12.1926 0.24
sll0161 Reverse -211 -225 15.3392 0.165
ssl0296 Reverse -36 -50 15.3392 0.165
slr0181 Forward -398 -384 15.3392 0.165
sll0157 Forward -389 -375 17.7975 0.165
slr0360 Forward -51 -37 10.226 0.261
sll0337 Reverse -228 -242 8.65272 0.298
slr0376 Forward -391 -377 19.9608 0.149
sll0327 Reverse -290 -304 8.75105 0.294
slr0386 Forward -26 -12 8.75105 0.294
sll0766 Forward -179 -165 13.6676 0.211
sll0755 Forward -125 -111 13.8643 0.208
sll0755 Reverse -343 -357 11.6026 0.24
sll0751 Forward -69 -55 11.3077 0.249
slr0782 Reverse -67 -81 11.3077 0.249
slr0341 Forward -331 -317 8.45605 0.298
sll0325 Forward -253 -239 15.2409 0.171
sll0319 Reverse -336 -350 9.04604 0.28
slr0354 Reverse -369 -383 13.8643 0.208
sll0007 Forward -159 -145 16.1259 0.165
sll0199 Forward -318 -304 10.226 0.261
slr0226 Reverse -108 -122 10.226 0.261
sll0416 Reverse -107 -121 10.1277 0.263
sll0404 Reverse -263 -277 17.1092 0.165
sll0070 Forward -128 -114 8.55439 0.298
sll0057 Forward -241 -227 8.84938 0.29
slr0467 Reverse -29 -43 17.0108 0.165
sll0456 Forward -43 -29 12.9793 0.227
sll0455 Forward -146 -132 17.9942 0.165
sll0688 Reverse -150 -164 9.34103 0.277
sll0687 Forward -85 -71 8.75105 0.294
slr0637 Forward -225 -211 16.9125 0.165
sll0381 Forward -37 -23 10.1277 0.263
sll0373 Reverse -105 -119 12.1926 0.24
slr0427 Reverse -376 -390 9.43936 0.277
slr0192 Forward -187 -173 9.04604 0.28
slr0208 Reverse -162 -176 9.43936 0.277
slr0211 Reverse -49 -63 9.83269 0.27
slr0211 Forward -97 -83 9.43936 0.277
sll0178 Reverse -276 -290 10.6193 0.26
slr0922 Forward -303 -289 8.65272 0.298
sll0554 Forward -317 -303 8.75105 0.294
ssl1552 Forward -199 -185 11.701 0.24
ssl1552 Forward -192 -178 9.73436 0.276
slr0839 Reverse -183 -197 9.14437 0.277
ssl1533 Forward -112 -98 11.701 0.24
ssl1533 Forward -367 -353 10.0294 0.265
slr0845 Reverse -99 -113 11.701 0.24
sll0085 Forward -381 -367 15.8309 0.165
slr0079 Forward -211 -197 8.84938 0.29
slr0086 Forward -307 -293 8.55439 0.298
sll0484 Reverse -44 -58 13.5693 0.213
slr0502 Forward -87 -73 13.5693 0.213
slr0503 Reverse -218 -232 15.4376 0.165
slr0505 Reverse -83 -97 11.701 0.24
sll0480 Forward -36 -22 11.111 0.249
slr0509 Reverse -147 -161 11.111 0.249
sll0479 Reverse -249 -263 10.3243 0.261
slr0516 Reverse -24 -38 12.0943 0.24
slr0519 Reverse -171 -185 10.6193 0.26
slr0521 Forward -230 -216 8.45605 0.298
sll0467 Forward -340 -326 12.291 0.24
sll0467 Forward -363 -349 9.43936 0.277
sll0099 Forward -104 -90 18.8791 0.149
slr0299 Forward -107 -93 12.3893 0.24
slr0303 Forward -254 -240 8.55439 0.298
sll0794 Reverse -361 -375 9.14437 0.277
slr0797 Forward -194 -180 11.701 0.24
slr0798 Forward -175 -161 10.1277 0.263
sll0790 Forward -374 -360 10.0294 0.265
ssl1464 Forward -353 -339 10.226 0.261
sll0669 Reverse -238 -252 9.34103 0.277
slr0708 Reverse -265 -279 16.2242 0.165
sll0044 Forward -229 -215 14.7492 0.173
sll0040 Forward -213 -199 8.55439 0.298
slr0528 Reverse -302 -316 12.3893 0.24
sll0528 Forward -229 -215 8.45605 0.298
sll0524 Forward -179 -165 9.04604 0.28
slr0557 Reverse -273 -287 13.1759 0.218
sll1342 Forward -100 -86 9.14437 0.277
slr1423 Reverse -155 -169 9.14437 0.277
slr1455 Forward -232 -218 8.55439 0.298
sll1365 Reverse -275 -289 11.701 0.24
slr0666 Reverse -276 -290 9.04604 0.28
slr0668 Reverse -90 -104 10.3243 0.261
slr1560 Forward -66 -52 10.9143 0.257
slr1566 Reverse -68 -82 14.1593 0.197
sll1483 Forward -370 -356 16.0275 0.165
sll0729 Forward -359 -345 11.111 0.249
ssr1258 Reverse -380 -394 10.0294 0.265
slr0455 Forward -23 -9 13.1759 0.218
slr0456 Reverse -168 -182 15.4376 0.165
slr0600 Reverse -261 -275 10.1277 0.263
sll0563 Forward -116 -102 14.9459 0.173
slr0603 Reverse -36 -50 14.9459 0.173
sll5002 Forward -374 -360 11.111 0.249
ssl5027 Forward -41 -27 9.2427 0.277
sll5033 Forward -124 -110 11.8976 0.24
ssl5068 Reverse -32 -46 10.6193 0.26
sll5072 Forward -39 -25 9.14437 0.277
slr5073 Reverse -196 -210 9.14437 0.277
sll5084 Forward -310 -296 14.5526 0.178
ssl5108 Reverse -32 -46 10.6193 0.26
ssr5121 Forward -238 -224 10.1277 0.263
sll7030 Reverse -262 -276 16.7159 0.165
sll7090 Reverse -148 -162 14.6509 0.173
slr7091 Forward -184 -170 10.521 0.261
slr7092 Forward -341 -327 14.6509 0.173
slr7099 Forward -251 -237 17.3058 0.165
sll8001 Reverse -274 -288 14.1593 0.197
sll8007 Forward -216 -202 12.586 0.24
ssl8010 Forward -372 -358 19.5675 0.149
ssr8013 Forward -100 -86 13.3726 0.214
slr8014 Forward -335 -321 13.3726 0.214
slr8037 Forward -324 -310 9.73436 0.276
slr6009 Forward -392 -378 10.3243 0.261
slr6068 Forward -392 -378 10.3243 0.261
slr6107 Reverse -34 -48 12.6843 0.24
slr6108 Reverse -108 -122 11.8976 0.24
6803t07 Reverse -84 -98 11.2093 0.249
6803t10 Forward -221 -207 12.1926 0.24
6803t10 Forward -109 -95 9.63603 0.277
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.875  0.000  0.125  
0.250 0.000 0.000 0.750
0.000 0.000 0.000 1.000
0.000 0.000 0.250 0.750
0.000 0.000 0.875 0.125
0.750 0.000 0.250 0.000
0.250 0.250 0.375 0.125
0.125 0.375 0.125 0.375
0.250 0.000 0.125 0.625
0.125 0.375 0.375 0.125
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.125 0.750 0.125
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000