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Details for NP_441865.1_3

Name NP_441865.1_3
Length 19
Regular expression T[AT][AT][TCA]A[TAC][TC]G[CAT][CA][AG][TG][TAC]ATTTT[TG]
Central Yes

Motif logo

Genes containing this motif

155 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1311 Reverse -119 -137 15.1621 0.235
sll1406 Forward -202 -184 15.0638 0.235
sll1401 Reverse -241 -259 15.6538 0.225
sll1394 Reverse -6 -24 13.2938 0.252
slr0730 Forward -270 -252 15.5554 0.227
ssl1326 Reverse -152 -170 14.2771 0.242
slr0734 Forward -145 -127 14.2771 0.242
slr0743 Forward -30 -12 14.7688 0.235
slr0243 Reverse -247 -265 15.2604 0.234
slr1773 Forward -167 -149 12.3105 0.292
sll1662 Reverse -26 -44 13.8838 0.242
slr1798 Forward -205 -187 13.8838 0.242
sll1656 Forward -229 -211 12.9988 0.261
slr1299 Forward -197 -179 12.5072 0.287
sll0934 Reverse -102 -120 18.8004 0.0883
slr1617 Reverse -380 -398 12.9988 0.261
slr1070 Forward -117 -99 13.6872 0.246
sll1020 Reverse -272 -290 14.0805 0.242
sll1003 Reverse -134 -152 17.7187 0.118
sll1001 Reverse -274 -292 13.6872 0.246
slr1753 Forward -274 -256 13.6872 0.246
sll1749a Forward -108 -90 14.9655 0.235
sll1945 Reverse -170 -188 13.9821 0.242
slr2033 Forward -66 -48 13.9821 0.242
smr0007 Forward -21 -3 12.4089 0.287
smr0008 Forward -173 -155 12.4089 0.287
slr2035 Forward -377 -359 12.4089 0.287
slr1023 Forward -34 -16 12.3105 0.292
slr1024 Forward -355 -337 12.3105 0.292
sll1571 Forward -93 -75 17.1287 0.133
slr2010 Forward -34 -16 14.6705 0.235
ssr3409 Forward -381 -363 14.6705 0.235
ssl3615 Forward -266 -248 13.5888 0.246
sll1456 Reverse -202 -220 14.5721 0.235
sll1135 Forward -128 -110 12.4089 0.287
slr1232 Reverse -26 -44 12.4089 0.287
sll1276 Forward -158 -140 12.4089 0.287
slr0890 Forward -164 -146 19.6853 0.0708
sll1317 Forward -85 -67 13.8838 0.242
ssl2595 Forward -275 -257 14.5721 0.235
sll1314 Reverse -59 -77 13.5888 0.246
slr1403 Forward -325 -307 13.5888 0.246
slr1407 Forward -386 -368 12.9005 0.269
sll1775 Reverse -210 -228 12.7038 0.287
slr2132 Forward -247 -229 15.3588 0.234
sll2009 Forward -216 -198 13.2938 0.252
sll1630 Reverse -363 -381 13.4905 0.246
sll1626 Forward -360 -342 14.4738 0.241
slr0868 Forward -136 -118 13.9821 0.242
slr1248 Reverse -274 -292 13.7855 0.246
slr1259 Forward -105 -87 13.1955 0.255
slr1262 Forward -180 -162 15.4571 0.234
sll1961 Reverse -11 -29 13.5888 0.246
ssl0461 Forward -385 -367 12.8022 0.279
sll0247 Forward -50 -32 13.2938 0.252
slr2080 Forward -50 -32 12.7038 0.287
sll1988 Reverse -10 -28 13.7855 0.246
sll1983 Reverse -106 -124 14.0805 0.242
slr2104 Forward -273 -255 18.702 0.0883
sll1424 Forward -219 -201 12.4089 0.287
slr1509 Forward -357 -339 12.9988 0.261
slr0806 Reverse -200 -218 16.3421 0.179
sml0008 Forward -51 -33 17.7187 0.118
slr0820 Reverse -91 -109 13.9821 0.242
sll0804 Forward -96 -78 17.2271 0.133
sll1256 Reverse -61 -79 13.8838 0.242
slr1338 Forward -358 -340 13.8838 0.242
sll1882 Reverse -72 -90 18.3087 0.0897
sll1882 Forward -32 -14 13.0972 0.255
slr1975 Forward -172 -154 18.3087 0.0897
slr1975 Reverse -212 -230 13.0972 0.255
sll1876 Forward -162 -144 18.8987 0.0883
sll1370 Forward -387 -369 14.8671 0.235
slr1170 Forward -97 -79 12.6055 0.287
slr0944 Reverse -267 -285 12.4089 0.287
slr1624 Reverse -46 -64 13.6872 0.246
sll1537 Forward -26 -8 19.9803 0.0644
sll1527 Forward -27 -9 13.5888 0.246
sll0424 Forward -175 -157 12.2122 0.3
sll0423 Reverse -353 -371 15.0638 0.235
slr0392 Reverse -148 -166 14.7688 0.235
slr0398 Reverse -144 -162 15.6538 0.225
slr0400 Reverse -102 -120 13.7855 0.246
ssr0657 Reverse -382 -400 13.2938 0.252
slr0142 Forward -188 -170 16.7354 0.142
slr0143 Forward -174 -156 15.2604 0.234
slr1923 Forward -39 -21 15.6538 0.225
sll1860 Forward -213 -195 14.1788 0.242
slr1933 Reverse -212 -230 14.1788 0.242
sll1851 Forward -42 -24 13.8838 0.242
slr1936 Reverse -61 -79 13.8838 0.242
ssl0563 Forward -342 -324 14.5721 0.235
slr0331 Reverse -27 -45 14.5721 0.235
sll0293 Reverse -199 -217 16.9321 0.133
slr0338 Forward -30 -12 16.9321 0.133
slr0380 Forward -111 -93 14.6705 0.235
sll0329 Reverse -312 -330 12.5072 0.287
slr0771 Forward -77 -59 13.4905 0.246
sll0764 Forward -37 -19 16.2438 0.185
sll0325 Reverse -324 -342 12.2122 0.3
sll0010 Reverse -113 -131 17.0304 0.133
slr0019 Forward -349 -331 17.0304 0.133
sll0208 Forward -369 -351 15.3588 0.234
sll0202 Reverse -162 -180 15.8504 0.225
sll0202 Reverse -315 -333 14.1788 0.242
slr0050 Forward -22 -4 13.1955 0.255
sll0691 Reverse -274 -292 13.0972 0.255
sll0687 Forward -161 -143 19.0954 0.0883
sll0682 Forward -243 -225 19.9803 0.0644
sll0682 Forward -184 -166 19.292 0.088
slr0643 Forward -199 -181 13.3922 0.249
sll0373 Forward -109 -91 13.1955 0.255
slr0906 Reverse -38 -56 12.5072 0.287
slr0923 Reverse -221 -239 13.4905 0.246
slr0580 Forward -116 -98 13.3922 0.249
slr0076 Reverse -303 -321 18.2104 0.0908
slr0079 Forward -97 -79 12.4089 0.287
slr0081 Forward -57 -39 16.8337 0.138
slr0519 Forward -204 -186 13.0972 0.255
slr0520 Reverse -29 -47 13.8838 0.242
slr0617 Reverse -103 -121 15.2604 0.234
sll0102 Forward -27 -9 15.6538 0.225
slr0105 Reverse -319 -337 15.6538 0.225
slr0119 Reverse -122 -140 15.0638 0.235
sll0290 Reverse -275 -293 13.1955 0.255
slr0315 Reverse -111 -129 18.5054 0.0883
sll0779 Forward -336 -318 12.5072 0.287
sll0671 Forward -113 -95 12.2122 0.3
sll0668 Reverse -130 -148 13.0972 0.255
sll0665 Reverse -214 -232 12.3105 0.292
sll0657 Forward -153 -135 17.4237 0.133
slr0036 Reverse -284 -302 15.5554 0.227
slr0531 Forward -87 -69 18.6037 0.0883
sll0508 Reverse -100 -118 20.0787 0.0644
slr0537 Forward -136 -118 20.0787 0.0644
sll0895 Forward -156 -138 14.3755 0.242
slr0546 Reverse -277 -295 14.3755 0.242
slr1455 Reverse -65 -83 14.2771 0.242
slr0658 Reverse -326 -344 12.9005 0.269
ssl2874 Reverse -322 -340 14.7688 0.235
sll1486 Forward -213 -195 17.3254 0.133
sll0431 Forward -367 -349 13.0972 0.255
slr0610 Reverse -104 -122 14.7688 0.235
sll5036 Forward -38 -20 13.3922 0.249
slr5037 Reverse -80 -98 13.3922 0.249
ssl7022 Reverse -195 -213 12.4089 0.287
slr7023 Forward -75 -57 12.4089 0.287
sll7070 Forward -220 -202 12.5072 0.287
sll8020 Forward -360 -342 14.3755 0.242
slr6021 Forward -223 -205 12.6055 0.287
ssr6024 Forward -319 -301 13.4905 0.246
slr6080 Forward -223 -205 12.6055 0.287
ssr6083 Forward -319 -301 13.4905 0.246
sll6093 Reverse -83 -101 14.5721 0.235
slr6094 Forward -157 -139 14.5721 0.235
6803t03 Forward -382 -364 14.4738 0.241
6803t03 Forward -36 -18 13.8838 0.242
6803t15 Forward -152 -134 14.9655 0.235
6803t28 Forward -286 -268 14.5721 0.235
6803t30 Forward -80 -62 17.0304 0.133
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.150  0.050  0.000  0.800  
0.400 0.050 0.150 0.400
0.550 0.050 0.100 0.300
0.200 0.350 0.000 0.450
0.600 0.100 0.150 0.150
0.250 0.250 0.000 0.500
0.100 0.350 0.000 0.550
0.000 0.000 1.000 0.000
0.300 0.400 0.000 0.300
0.200 0.650 0.000 0.150
0.650 0.050 0.250 0.050
0.150 0.000 0.250 0.600
0.200 0.200 0.150 0.450
1.000 0.000 0.000 0.000
0.000 0.050 0.100 0.850
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.050 0.000 0.000 0.950
0.000 0.050 0.300 0.650