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Details for NP_441857.1_5

Name NP_441857.1_5
Length 19
Regular expression C[TA][TC][ACT][AG][GT][CG]AGCGATCGC[CT][CG]T
Central No

Motif logo

Genes containing this motif

267 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1316 Forward -133 -115 2.87075 0.259
slr1319 Reverse -95 -113 4.14905 0.222
slr1319 Forward -42 -24 2.18243 0.275
slr1488 Reverse -281 -299 1.98577 0.282
sll1393 Forward -133 -115 4.83737 0.221
sll1064 Reverse -155 -173 1.39578 0.297
sll1054 Reverse -56 -74 6.41066 0.189
slr1130 Reverse -35 -53 12.5072 0.185
slr1130 Forward -19 -1 4.6407 0.222
slr0724 Forward -106 -88 11.7205 0.185
slr0729 Forward -216 -198 5.72234 0.2
slr0740 Reverse -101 -119 3.16574 0.246
slr1416 Reverse -380 -398 7.78729 0.185
sll1319 Forward -399 -381 3.26407 0.246
sll1041 Forward -96 -78 8.96727 0.185
sll1037 Reverse -279 -297 8.37728 0.185
sll1030 Forward -204 -186 1.59244 0.297
slr1773 Forward -77 -59 2.47742 0.266
sll1680 Reverse -77 -95 2.57575 0.266
sll1666 Forward -201 -183 3.46073 0.244
sll1198 Forward -161 -143 13.6872 0.153
sll1194 Forward -96 -78 3.16574 0.246
sll0923 Reverse -219 -237 1.69077 0.295
slr0981 Reverse -44 -62 4.83737 0.221
slr1611 Forward -180 -162 1.39578 0.297
sll1025 Reverse -154 -172 1.29745 0.297
sll1022 Reverse -119 -137 25.1919 0.0163
slr0687 Reverse -326 -344 4.14905 0.222
slr1591 Forward -323 -305 4.34571 0.222
slr1592 Reverse -270 -288 2.18243 0.275
sll1509 Reverse -113 -131 9.0656 0.185
slr1599 Forward -253 -235 9.0656 0.185
slr1609 Forward -108 -90 1.59244 0.297
sll1643 Forward -147 -129 5.82068 0.2
slr1762 Reverse -97 -115 5.82068 0.2
slr1763 Forward -203 -185 2.87075 0.259
smr0007 Forward -102 -84 1.39578 0.297
smr0008 Forward -254 -236 1.39578 0.297
slr2044 Reverse -82 -100 6.80398 0.189
slr2049 Reverse -325 -343 17.7187 0.113
sll1934 Forward -318 -300 1.88744 0.287
sll1932 Forward -318 -300 3.06741 0.247
slr1908 Forward -251 -233 4.9357 0.22
slr1911 Reverse -44 -62 4.44404 0.222
slr1911 Forward -210 -192 3.46073 0.244
sll1830 Forward -228 -210 2.67408 0.265
sll0994 Reverse -310 -328 2.28076 0.274
sll1298 Forward -83 -65 4.14905 0.222
ssr2315 Reverse -189 -207 4.14905 0.222
sll1283 Forward -352 -334 5.72234 0.2
sll1568 Forward -254 -236 5.62401 0.2
sll1920 Forward -276 -258 5.52568 0.2
sll1079 Forward -84 -66 1.69077 0.295
sll1078 Forward -33 -15 7.78729 0.185
slr1145 Reverse -292 -310 1.29745 0.297
slr1146 Forward -128 -110 5.32902 0.208
slr1147 Reverse -116 -134 5.32902 0.208
ssl3446 Reverse -67 -85 3.3624 0.244
sll1804 Reverse -347 -365 1.29745 0.297
sll1801 Reverse -274 -292 2.37909 0.268
slr1200 Forward -396 -378 7.29564 0.189
slr1205 Forward -250 -232 2.0841 0.277
slr1212 Reverse -148 -166 15.6538 0.121
sll1112 Forward -51 -33 3.55906 0.243
ssl3712 Forward -37 -19 6.50899 0.189
sll1737 Forward -108 -90 1.39578 0.297
slr1828 Reverse -142 -160 1.39578 0.297
sll1723 Reverse -263 -281 8.86894 0.185
slr1840 Reverse -212 -230 4.73903 0.222
slr1540 Reverse -116 -134 2.37909 0.268
ssl2823 Reverse -158 -176 5.72234 0.2
sll1142 Forward -338 -320 8.86894 0.185
slr1235 Forward -347 -329 3.06741 0.247
slr1240 Forward -343 -325 8.96727 0.185
sll1362 Reverse -82 -100 3.16574 0.246
ssr2406 Forward -272 -254 8.57394 0.185
ssr2406 Forward -112 -94 3.16574 0.246
slr1440 Forward -249 -231 1.10079 0.299
sll1349 Reverse -272 -290 8.08229 0.185
sll0875 Reverse -12 -30 3.06741 0.247
slr0876 Forward -177 -159 3.06741 0.247
slr0876 Reverse -277 -295 1.49411 0.297
slr0878 Reverse -118 -136 5.52568 0.2
sll0871 Forward -234 -216 5.52568 0.2
slr0884 Reverse -82 -100 5.52568 0.2
sll0869 Forward -238 -220 2.57575 0.266
slr0889 Forward -229 -211 4.73903 0.222
slr0889 Forward -378 -360 2.37909 0.268
slr0891 Reverse -212 -230 1.49411 0.297
slr1866 Reverse -232 -250 16.9321 0.113
slr1879 Reverse -156 -174 2.18243 0.275
sll1761 Reverse -132 -150 1.49411 0.297
ssr3189 Reverse -303 -321 2.47742 0.266
slr1888 Forward -250 -232 1.29745 0.297
sll2015 Reverse -139 -157 7.00065 0.189
slr2136 Forward -198 -180 7.00065 0.189
slr1803 Reverse -119 -137 8.57394 0.185
sll1698 Forward -71 -53 16.6371 0.113
sll1625 Forward -182 -164 15.8504 0.121
sll0848 Forward -125 -107 4.05072 0.222
sll0839 Reverse -68 -86 7.00065 0.189
sll0838 Forward -270 -252 7.98396 0.185
sll1155 Reverse -40 -58 6.60732 0.189
slr1254 Forward -134 -116 7.39397 0.189
slr1255 Reverse -111 -129 5.82068 0.2
slr1261 Reverse -354 -372 3.16574 0.246
sll1959 Forward -45 -27 1.10079 0.299
slr2060 Reverse -42 -60 4.6407 0.222
sll1954 Forward -66 -48 9.95058 0.185
slr2062 Reverse -363 -381 9.95058 0.185
slr2004 Reverse -38 -56 8.37728 0.185
sll1615 Forward -250 -232 4.34571 0.222
sll1614 Forward -153 -135 2.77242 0.263
sll0248 Reverse -121 -139 11.9172 0.185
slr0270 Forward -140 -122 3.3624 0.244
sll1980 Reverse -194 -212 3.65739 0.239
sll1973 Forward -118 -100 4.24738 0.222
slr2105 Reverse -336 -354 8.96727 0.185
slr2105 Reverse -55 -73 4.24738 0.222
ssr2551 Forward -255 -237 5.91901 0.2
slr1520 Forward -318 -300 1.98577 0.282
sll1231 Reverse -225 -243 5.42735 0.205
slr0808 Reverse -118 -136 2.47742 0.266
slr0813 Reverse -49 -67 2.77242 0.263
slr0820 Reverse -18 -36 9.65558 0.185
sll1251 Reverse -115 -133 8.57394 0.185
sll1250 Reverse -161 -179 3.3624 0.244
sll1899 Forward -215 -197 6.41066 0.189
ssl3573 Forward -147 -129 7.78729 0.185
sll1890 Forward -362 -344 7.68896 0.189
slr1975 Forward -310 -292 8.67227 0.185
sll1875 Reverse -190 -208 6.50899 0.189
slr1983 Reverse -316 -334 8.96727 0.185
slr1984 Reverse -146 -164 2.0841 0.277
smr0011 Reverse -73 -91 3.3624 0.244
slr1469 Reverse -220 -238 3.3624 0.244
sll1380 Forward -144 -126 5.52568 0.2
slr1476 Reverse -65 -83 5.52568 0.2
sll1370 Forward -363 -345 9.16393 0.185
slr1278 Forward -335 -317 3.95239 0.222
slr1281 Reverse -156 -174 4.54237 0.222
sll1442 Reverse -89 -107 4.54237 0.222
slr1673 Forward -312 -294 6.31233 0.189
sll0921 Reverse -301 -319 8.86894 0.185
slr0950 Forward -154 -136 1.10079 0.299
sll1527 Forward -174 -156 2.47742 0.266
slr1645 Reverse -332 -350 5.52568 0.2
sll1521 Reverse -129 -147 3.55906 0.243
slr0285 Forward -381 -363 5.03403 0.217
slr0294 Reverse -69 -87 4.6407 0.222
slr0294 Reverse -330 -348 4.34571 0.222
ssr0657 Forward -386 -368 20.767 0.0671
sll0144 Reverse -165 -183 11.0322 0.185
sll0141 Reverse -288 -306 7.00065 0.189
slr0161 Forward -106 -88 7.00065 0.189
slr0164 Reverse -268 -286 5.52568 0.2
slr1924 Forward -293 -275 6.60732 0.189
sll1854 Forward -170 -152 3.55906 0.243
slr1944 Forward -273 -255 13.7855 0.153
ssr3307 Reverse -376 -394 4.9357 0.22
slr1946 Forward -267 -249 8.37728 0.185
sll0944 Reverse -142 -160 7.39397 0.189
slr0324 Reverse -228 -246 1.29745 0.297
sll0156 Reverse -127 -145 2.67408 0.265
slr0184 Forward -76 -58 2.67408 0.265
slr0361 Reverse -199 -217 6.80398 0.189
slr0379 Reverse -127 -145 2.0841 0.277
slr0381 Forward -220 -202 2.18243 0.275
sll0329 Reverse -117 -135 7.88563 0.185
slr0387 Forward -141 -123 6.31233 0.189
slr0769 Reverse -286 -304 3.16574 0.246
slr0776 Forward -311 -293 1.29745 0.297
sll0757 Reverse -320 -338 3.26407 0.246
slr0780 Forward -200 -182 3.26407 0.246
sll0755 Reverse -61 -79 14.8671 0.123
slr0343 Forward -207 -189 6.41066 0.189
slr0019 Forward -69 -51 9.65558 0.185
sll0195 Forward -184 -166 2.37909 0.268
slr0233 Reverse -42 -60 5.23069 0.209
sll0409 Forward -348 -330 1.49411 0.297
sll0406 Reverse -228 -246 1.39578 0.297
slr0049 Reverse -117 -135 7.78729 0.185
slr0055 Forward -209 -191 7.98396 0.185
slr0055 Forward -371 -353 2.47742 0.266
slr0058 Forward -111 -93 1.10079 0.299
slr0069 Reverse -216 -234 1.59244 0.297
slr0069 Reverse -146 -164 1.10079 0.299
sml0002 Forward -40 -22 3.46073 0.244
slr0477 Reverse -77 -95 3.46073 0.244
slr0483 Reverse -225 -243 13.9821 0.153
slr0492 Reverse -159 -177 10.8356 0.185
slr0650 Forward -280 -262 8.08229 0.185
sll0382 Forward -184 -166 3.3624 0.244
sll0370 Reverse -54 -72 1.10079 0.299
sll0178 Forward -147 -129 1.39578 0.297
sll0887 Reverse -375 -393 10.6389 0.185
sll0891 Forward -185 -167 2.57575 0.266
sll0552 Reverse -17 -35 7.78729 0.185
slr0836 Forward -386 -368 1.78911 0.29
slr0088 Reverse -237 -255 1.88744 0.287
slr0505 Forward -271 -253 2.28076 0.274
sll0482 Forward -288 -270 3.06741 0.247
sll0480 Forward -366 -348 5.03403 0.217
sll0474 Reverse -151 -169 8.7706 0.185
sll0595 Forward -321 -303 6.11567 0.197
sll0593 Forward -276 -258 4.83737 0.221
slr0616 Reverse -170 -188 6.90232 0.189
sll0590 Reverse -203 -221 7.78729 0.185
slr0618 Forward -48 -30 7.78729 0.185
sll0588 Reverse -330 -348 1.29745 0.297
slr0625 Reverse -225 -243 5.82068 0.2
slr0626 Reverse -376 -394 5.23069 0.209
slr0104 Forward -398 -380 2.67408 0.265
slr0104 Forward -201 -183 2.18243 0.275
sll0094 Forward -267 -249 7.00065 0.189
sll0794 Reverse -146 -164 6.11567 0.197
sll0669 Reverse -216 -234 1.39578 0.297
sll0664 Forward -241 -223 15.0638 0.123
sll0045 Forward -265 -247 11.5239 0.185
sll0045 Reverse -242 -260 1.29745 0.297
sll0039 Reverse -144 -162 4.24738 0.222
sll0037 Forward -179 -161 13.2938 0.164
slr0530 Forward -110 -92 3.75572 0.234
sll0508 Forward -96 -78 1.78911 0.29
slr0537 Reverse -140 -158 1.78911 0.29
sll0502 Forward -252 -234 4.83737 0.221
sll1344 Reverse -300 -318 10.2456 0.185
slr0655 Reverse -253 -271 1.19912 0.299
sll0624 Forward -336 -318 10.5406 0.185
sll0624 Reverse -313 -331 2.47742 0.266
slr0662 Reverse -79 -97 10.5406 0.185
slr0662 Forward -102 -84 2.47742 0.266
slr0665 Reverse -117 -135 5.13236 0.215
slr0665 Forward -365 -347 4.34571 0.222
sll1483 Forward -173 -155 8.96727 0.185
sll1470 Forward -34 -16 6.41066 0.189
slr1588 Reverse -195 -213 6.41066 0.189
slr0752 Reverse -313 -331 11.2289 0.185
slr1658 Forward -163 -145 5.82068 0.2
ssr2781 Forward -141 -123 14.8671 0.123
sll0449 Forward -84 -66 9.85225 0.185
sll0445 Forward -339 -321 6.31233 0.189
sll0436 Reverse -278 -296 5.62401 0.2
slr0588 Forward -280 -262 7.39397 0.189
sll0564 Reverse -5 -23 6.50899 0.189
slr0598 Forward -40 -22 6.50899 0.189
slr0599 Forward -382 -364 6.50899 0.189
slr0605 Forward -73 -55 7.19731 0.189
slr0610 Reverse -33 -51 2.57575 0.266
sll5002 Forward -327 -309 9.95058 0.185
sll5002 Reverse -166 -184 5.03403 0.217
ssr5011 Forward -26 -8 16.5388 0.113
sll5047 Forward -274 -256 2.0841 0.277
sll5052 Forward -357 -339 8.08229 0.185
slr5054 Reverse -347 -365 8.08229 0.185
sll5059 Reverse -209 -227 3.16574 0.246
sll5081 Reverse -216 -234 6.90232 0.189
slr5082 Forward -274 -256 6.90232 0.189
ssl5113 Reverse -78 -96 1.10079 0.299
ssl5114 Reverse -80 -98 5.52568 0.2
slr5115 Forward -86 -68 5.52568 0.2
sll5123 Forward -127 -109 4.6407 0.222
slr5124 Reverse -8 -26 4.6407 0.222
sll7106 Forward -272 -254 1.29745 0.297
sll7006 Reverse -284 -302 1.19912 0.299
ssl7007 Reverse -57 -75 1.19912 0.299
ssr7018 Reverse -360 -378 3.95239 0.222
ssr7018 Reverse -287 -305 3.95239 0.222
ssr7018 Reverse -215 -233 3.95239 0.222
ssr7018 Reverse -143 -161 3.95239 0.222
ssr7018 Reverse -71 -89 3.95239 0.222
ssr7018 Reverse -2 -20 3.95239 0.222
ssl7019 Forward -358 -340 3.95239 0.222
ssl7019 Forward -284 -266 3.95239 0.222
ssl7019 Forward -206 -188 3.95239 0.222
ssl7019 Forward -132 -114 3.95239 0.222
ssl7019 Forward -58 -40 3.95239 0.222
ssl7020 Forward -359 -341 3.95239 0.222
ssl7020 Forward -285 -267 3.95239 0.222
ssl7020 Forward -212 -194 3.95239 0.222
ssl7020 Forward -142 -124 3.95239 0.222
ssl7020 Forward -69 -51 3.95239 0.222
ssl7021 Forward -121 -103 3.95239 0.222
ssl7021 Forward -53 -35 3.95239 0.222
slr7023 Reverse -366 -384 3.95239 0.222
slr7037 Reverse -223 -241 8.57394 0.185
sll7078 Reverse -294 -312 5.23069 0.209
slr7096 Reverse -315 -333 12.9005 0.175
slr8016 Forward -236 -218 7.09898 0.189
slr8037 Reverse -349 -367 8.37728 0.185
slr6001 Reverse -81 -99 7.98396 0.185
slr6013 Reverse -218 -236 4.14905 0.222
sll6054 Forward -241 -223 6.31233 0.189
slr6056 Reverse -321 -339 6.31233 0.189
slr6072 Reverse -218 -236 4.14905 0.222
6803t36 Forward -336 -318 6.41066 0.189
6803t39 Reverse -345 -363 7.29564 0.189
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.857  0.000  0.143  
0.429 0.000 0.000 0.571
0.000 0.286 0.000 0.714
0.429 0.286 0.000 0.286
0.714 0.000 0.286 0.000
0.000 0.000 0.714 0.286
0.000 0.429 0.429 0.143
1.000 0.000 0.000 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.857 0.143 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.857 0.143 0.000
0.000 0.000 0.857 0.143
0.000 0.857 0.000 0.143
0.000 0.571 0.000 0.429
0.000 0.429 0.429 0.143
0.000 0.000 0.143 0.857