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Details for NP_441848.1_9

Name NP_441848.1_9
Length 12
Regular expression [CA]C[CT]CC[CA]T[CA]ACC[TA]
Central No

Motif logo

Genes containing this motif

61 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1317 Reverse -228 -239 18.741 0.109
slr1107 Reverse -164 -175 18.741 0.109
slr1083 Forward -378 -367 11.8579 0.268
sll1022 Forward -108 -97 18.741 0.109
slr1591 Reverse -250 -261 11.2679 0.268
sll1011 Forward -270 -259 13.2345 0.263
slr1050 Reverse -54 -65 13.2345 0.263
sll1946 Forward -99 -88 11.4645 0.268
slr2032 Reverse -35 -46 11.4645 0.268
slr1201 Forward -53 -42 11.2679 0.268
sll1740 Forward -352 -341 11.2679 0.268
slr1827 Reverse -379 -390 11.2679 0.268
slr1874 Forward -370 -359 13.3328 0.255
sll1764 Forward -34 -23 11.5629 0.268
slr1735 Reverse -318 -329 11.2679 0.268
slr1991 Reverse -240 -251 11.2679 0.268
sll1979 Reverse -128 -139 11.2679 0.268
slr2094 Forward -109 -98 11.2679 0.268
slr2099 Forward -127 -116 11.5629 0.268
sll1892 Forward -52 -41 18.741 0.109
slr1968 Reverse -91 -102 18.741 0.109
sll1891 Forward -122 -111 19.8226 0.109
sll1878 Forward -362 -351 18.741 0.109
sll1172 Reverse -242 -253 11.5629 0.268
slr1279 Forward -41 -30 11.5629 0.268
slr1174 Forward -54 -43 11.2679 0.268
slr0937 Forward -185 -174 11.4645 0.268
slr0960 Forward -44 -33 11.6612 0.268
slr0398 Forward -287 -276 11.1696 0.281
sll0319 Forward -364 -353 20.7076 0.109
slr0358 Forward -33 -22 13.2345 0.263
sll0019 Forward -187 -176 11.2679 0.268
slr0434 Forward -53 -42 11.1696 0.281
slr0054 Forward -141 -130 18.741 0.109
slr0064 Reverse -62 -73 13.7261 0.218
sll0055 Forward -67 -56 11.2679 0.268
slr0067 Reverse -154 -165 11.2679 0.268
sll0886 Reverse -308 -319 12.6445 0.268
sll0541 Forward -324 -313 20.7076 0.109
sll0830 Forward -236 -225 18.446 0.129
sll0485 Forward -32 -21 12.3495 0.268
slr0301 Reverse -257 -268 16.4794 0.179
sll0669 Forward -209 -198 17.561 0.166
sll0662 Forward -331 -320 11.5629 0.268
sll0513 Reverse -89 -100 15.2994 0.204
slr0533 Forward -100 -89 15.2994 0.204
sll0505 Forward -371 -360 11.6612 0.268
sll0535 Forward -27 -16 13.5295 0.236
sll0522 Forward -65 -54 11.2679 0.268
slr1463 Forward -67 -56 17.561 0.166
sll0629 Reverse -205 -216 11.2679 0.268
slr0653 Forward -307 -296 11.2679 0.268
slr1571 Reverse -305 -316 11.4645 0.268
slr0597 Reverse -55 -66 11.4645 0.268
sll0564 Forward -245 -234 11.4645 0.268
slr0599 Reverse -142 -153 11.4645 0.268
sll8027 Reverse -277 -288 18.741 0.109
ssl8028 Reverse -59 -70 18.741 0.109
slr8029 Forward -159 -148 18.741 0.109
sll8031 Forward -175 -164 11.5629 0.268
slr6097 Reverse -198 -209 11.1696 0.281
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.400  0.600  0.000  0.000  
0.000 1.000 0.000 0.000
0.000 0.800 0.000 0.200
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.200 0.800 0.000 0.000
0.000 0.000 0.000 1.000
0.200 0.800 0.000 0.000
1.000 0.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.200 0.000 0.000 0.800