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Details for NP_441845.1_6

Name NP_441845.1_6
Length 19
Regular expression C[GC][GC]C[GA]GC[TA]CA[GA][ACG][GC]GCGATC
Central No

Motif logo

Genes containing this motif

275 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Reverse -76 -94 -1.84914 0.299
sll0558 Reverse -40 -58 -0.472507 0.274
slr1312 Reverse -53 -71 -0.472507 0.274
sll1399 Forward -148 -130 5.52568 0.182
sll1398 Reverse -190 -208 3.26407 0.233
slr1495 Reverse -230 -248 5.52568 0.182
sll1393 Reverse -30 -48 3.65739 0.221
sll1393 Reverse -105 -123 2.18243 0.262
slr1129 Forward -224 -206 -0.177514 0.274
sll0716 Reverse -280 -298 -1.06249 0.28
sll0703 Reverse -347 -365 6.41066 0.167
sll0703 Reverse -12 -30 -1.75081 0.296
slr0250 Forward -216 -198 19.292 0.0597
sll0222 Forward -131 -113 1.88744 0.27
sll1325 Reverse -50 -68 0.510803 0.274
sll1323 Forward -315 -297 5.72234 0.179
sll1319 Reverse -175 -193 -1.45582 0.285
sll1318 Forward -339 -321 -0.669169 0.274
slr1102 Forward -76 -58 6.01734 0.176
slr1102 Forward -52 -34 -1.25915 0.285
slr1104 Forward -248 -230 -1.94747 0.299
sll1031 Reverse -154 -172 -0.669169 0.274
sll1027 Forward -47 -29 -0.275845 0.274
slr1109 Reverse -232 -250 -0.275845 0.274
sll1667 Forward -157 -139 -1.06249 0.28
sll1201 Forward -59 -41 0.0191479 0.274
slr1291 Reverse -167 -185 0.0191479 0.274
sll0943 Forward -158 -140 9.45892 0.116
slr0963 Reverse -94 -112 9.45892 0.116
sll0934 Forward -219 -201 6.60732 0.167
slr1611 Reverse -152 -170 4.14905 0.211
slr1079 Forward -213 -195 -1.25915 0.285
sll1024 Forward -28 -10 -1.35749 0.285
sll1022 Forward -147 -129 1.78911 0.27
sll1021 Forward -390 -372 1.49411 0.274
sll1021 Reverse -161 -179 -0.0791831 0.274
sll0640 Reverse -345 -363 -0.669169 0.274
sll0638 Reverse -9 -27 1.00246 0.274
slr0692 Forward -169 -151 1.00246 0.274
sll1516 Reverse -35 -53 8.57394 0.125
slr1596 Forward -354 -336 8.57394 0.125
ssr2711 Forward -184 -166 -0.570838 0.274
sll1500 Reverse -342 -360 -0.964162 0.28
ssr1736 Reverse -184 -202 0.805796 0.274
sll1647 Forward -104 -86 4.34571 0.211
slr1756 Reverse -107 -125 4.34571 0.211
slr2032 Forward -230 -212 2.47742 0.249
ssr3451 Forward -394 -376 -0.669169 0.274
sll1940 Forward -270 -252 -1.94747 0.299
slr2044 Reverse -77 -95 4.05072 0.214
slr2048 Reverse -73 -91 0.904127 0.274
slr1920 Reverse -251 -269 -1.06249 0.28
slr1034 Reverse -96 -114 1.78911 0.27
slr1379 Reverse -225 -243 4.6407 0.211
slr1385 Forward -201 -183 1.10079 0.274
slr1385 Forward -367 -349 0.412472 0.274
ssl2542 Forward -121 -103 -0.7675 0.274
slr1395 Reverse -373 -391 -0.0791831 0.274
sll1578 Reverse -119 -137 7.98396 0.133
sll1926 Forward -179 -161 13.3922 0.0973
slr2011 Forward -125 -107 3.55906 0.223
slr2023 Forward -278 -260 9.36059 0.116
slr2026 Forward -322 -304 -1.84914 0.299
slr2027 Forward -93 -75 3.75572 0.219
slr1135 Reverse -80 -98 3.16574 0.236
sll1076 Reverse -84 -102 -1.35749 0.285
slr1145 Forward -223 -205 13.0972 0.0986
slr1146 Reverse -100 -118 -1.55415 0.289
slr1147 Forward -144 -126 -1.55415 0.289
slr1149 Reverse -204 -222 4.14905 0.211
sll1804 Reverse -342 -360 7.00065 0.165
sll1744 Reverse -360 -378 -0.472507 0.274
sll1739 Forward -345 -327 10.1472 0.116
slr1830 Reverse -325 -343 7.98396 0.133
sll1725 Reverse -145 -163 4.83737 0.211
slr1219 Forward -194 -176 0.609134 0.274
sll1142 Reverse -310 -328 5.72234 0.179
slr1228 Forward -274 -256 1.39578 0.274
slr1435 Reverse -314 -332 13.9821 0.0973
slr1444 Reverse -230 -248 14.5721 0.0973
sll1354 Reverse -211 -229 3.65739 0.221
sll1348 Forward -340 -322 -1.75081 0.296
sll1268 Reverse -201 -219 0.0191479 0.274
sll0867 Reverse -276 -294 1.19912 0.274
sll1305 Reverse -221 -239 -0.177514 0.274
sll1783 Forward -96 -78 10.3439 0.116
slr1855 Forward -245 -227 0.510803 0.274
slr1856 Forward -144 -126 6.31233 0.169
slr1859 Forward -107 -89 -1.65248 0.293
sll1776 Forward -208 -190 -0.570838 0.274
sll1769 Forward -141 -123 -1.84914 0.299
ssl3379 Forward -290 -272 8.47561 0.126
sll1761 Reverse -127 -145 -0.865831 0.279
sll2015 Reverse -134 -152 2.0841 0.262
sll2013 Forward -133 -115 2.0841 0.262
ssl3829 Reverse -204 -222 -1.94747 0.299
slr2141 Forward -234 -216 -1.94747 0.299
ssl3291 Reverse -79 -97 -1.75081 0.296
sll1698 Reverse -43 -61 -2.0458 0.299
sll1694 Reverse -329 -347 1.00246 0.274
sll1628 Reverse -115 -133 -1.16082 0.285
slr1734 Forward -49 -31 -1.16082 0.285
sll1626 Forward -158 -140 0.117479 0.274
sll0848 Reverse -97 -115 -0.374176 0.274
sll1159 Reverse -326 -344 0.412472 0.274
slr1245 Forward -243 -225 0.412472 0.274
sll1961 Reverse -165 -183 -0.669169 0.274
slr1993 Forward -114 -96 1.00246 0.274
slr1994 Reverse -105 -123 9.75391 0.116
slr1994 Forward -299 -281 -0.7675 0.274
slr1994 Forward -138 -120 -1.45582 0.285
slr2000 Reverse -111 -129 5.72234 0.179
slr2004 Reverse -290 -308 3.06741 0.239
sll1612 Reverse -83 -101 6.41066 0.167
ssl3127 Reverse -79 -97 -1.35749 0.285
sll0250 Reverse -70 -88 7.09898 0.165
slr0269 Forward -154 -136 1.49411 0.274
slr2088 Reverse -351 -369 0.805796 0.274
slr2101 Reverse -177 -195 1.29745 0.274
slr2101 Reverse -101 -119 0.609134 0.274
sll1973 Reverse -214 -232 12.1139 0.115
sll1973 Forward -247 -229 8.27895 0.13
ssl2781 Forward -332 -314 15.7521 0.0973
ssr2551 Forward -260 -242 -1.35749 0.285
slr1517 Forward -144 -126 5.52568 0.182
slr1520 Reverse -290 -308 0.510803 0.274
slr1521 Forward -30 -12 2.47742 0.249
ssr3571 Forward -101 -83 8.08229 0.133
slr2121 Forward -84 -66 -1.75081 0.296
slr1331 Reverse -174 -192 0.904127 0.274
sll1250 Forward -189 -171 4.54237 0.211
slr1347 Reverse -275 -293 -1.06249 0.28
sll1245 Reverse -237 -255 1.10079 0.274
slr1957 Reverse -57 -75 2.57575 0.249
sll1899 Reverse -187 -205 0.707465 0.274
ssl3573 Forward -63 -45 2.67408 0.245
slr1962 Reverse -39 -57 2.67408 0.245
sll1894 Forward -358 -340 -2.0458 0.299
sll1885 Forward -134 -116 -1.25915 0.285
slr1974 Reverse -44 -62 -1.25915 0.285
sll1884 Forward -329 -311 -0.472507 0.274
sll1884 Reverse -210 -228 -0.7675 0.274
slr1975 Reverse -282 -300 1.69077 0.274
slr1978 Forward -121 -103 3.85406 0.217
slr1979 Reverse -33 -51 -0.7675 0.274
smr0011 Forward -101 -83 -0.374176 0.274
slr1469 Forward -248 -230 -0.374176 0.274
slr1278 Reverse -307 -325 -1.84914 0.299
ssr2130 Forward -274 -256 0.904127 0.274
slr1530 Forward -188 -170 18.997 0.0597
sll1104 Forward -400 -382 10.6389 0.116
sll1101 Reverse -208 -226 16.1454 0.0973
sll1091 Forward -104 -86 9.85225 0.116
slr1167 Reverse -278 -296 9.85225 0.116
sll1087 Reverse -238 -256 2.18243 0.262
sll1562 Forward -368 -350 0.609134 0.274
sll1557 Forward -327 -309 -0.7675 0.274
sll1556 Reverse -220 -238 7.00065 0.165
sll0916 Forward -117 -99 17.4237 0.0789
sll0916 Reverse -84 -102 9.36059 0.116
slr0940 Forward -274 -256 8.7706 0.124
slr0943 Forward -378 -360 4.24738 0.211
ssr1600 Forward -105 -87 -0.669169 0.274
slr0958 Reverse -59 -77 10.2456 0.116
sll1522 Forward -150 -132 2.87075 0.245
sll0424 Forward -80 -62 -0.0791831 0.274
sll0421 Reverse -163 -181 6.11567 0.173
sll0269 Reverse -199 -217 -0.7675 0.274
sll0263 Forward -110 -92 -0.275845 0.274
sll0261 Forward -206 -188 3.85406 0.217
slr0284 Reverse -93 -111 3.85406 0.217
sll0257 Forward -242 -224 9.16393 0.119
sll0257 Reverse -209 -227 0.314141 0.274
slr0394 Reverse -242 -260 7.59063 0.149
slr0147 Forward -162 -144 0.21581 0.274
slr0322 Reverse -250 -268 0.904127 0.274
slr0326 Reverse -194 -212 -0.0791831 0.274
sll0295 Reverse -240 -258 2.77242 0.245
slr0335 Forward -51 -33 2.77242 0.245
ssl0312 Reverse -302 -320 -0.177514 0.274
slr0185 Reverse -278 -296 6.70565 0.167
slr0361 Forward -167 -149 6.90232 0.167
sll0336 Reverse -6 -24 -1.94747 0.299
slr0373 Reverse -332 -350 3.55906 0.223
slr1003 Reverse -339 -357 11.3272 0.115
sll0762 Forward -314 -296 -0.865831 0.279
slr0342 Forward -312 -294 -0.669169 0.274
sll0309 Reverse -344 -362 2.67408 0.245
slr0011 Reverse -195 -213 -2.0458 0.299
sll0012 Reverse -270 -288 -2.0458 0.299
ssr0349 Reverse -187 -205 1.00246 0.274
sll0204 Reverse -247 -265 4.24738 0.211
ssl0788 Reverse -4 -22 -1.94747 0.299
slr0050 Forward -269 -251 6.60732 0.167
sll0462 Reverse -27 -45 -2.0458 0.299
slr0476 Forward -284 -266 3.85406 0.217
slr0480 Reverse -353 -371 -0.570838 0.274
sll0455 Forward -182 -164 -0.964162 0.28
sll0614 Forward -217 -199 11.0322 0.115
sll0614 Reverse -184 -202 -0.570838 0.274
sll0606 Forward -109 -91 -1.35749 0.285
slr0644 Reverse -8 -26 -1.35749 0.285
slr0418 Reverse -57 -75 -0.0791831 0.274
ssr0693 Reverse -229 -247 3.46073 0.226
sll0380 Forward -122 -104 2.0841 0.262
sll0379 Forward -260 -242 0.21581 0.274
sll0373 Forward -160 -142 4.6407 0.211
ssr0330 Reverse -354 -372 -0.0791831 0.274
slr0905 Forward -236 -218 4.34571 0.211
sll0891 Reverse -157 -175 1.19912 0.274
slr0923 Forward -231 -213 -2.0458 0.299
sll0834 Forward -232 -214 -0.275845 0.274
sll0083 Forward -352 -334 4.44404 0.211
slr0079 Forward -364 -346 13.3922 0.0973
slr0095 Reverse -299 -317 -1.94747 0.299
sll0487 Forward -120 -102 -1.06249 0.28
slr0503 Reverse -146 -164 0.609134 0.274
sll0479 Reverse -303 -321 2.77242 0.245
sll0473 Forward -197 -179 -0.964162 0.28
slr0517 Reverse -117 -135 -1.75081 0.296
slr0518 Forward -327 -309 -0.472507 0.274
sll0596 Forward -378 -360 6.11567 0.173
slr0615 Reverse -245 -263 -0.7675 0.274
slr0104 Reverse -370 -388 1.10079 0.274
sll0092 Reverse -315 -333 -0.669169 0.274
slr0788 Forward -269 -251 1.78911 0.27
sll0798 Forward -358 -340 7.09898 0.165
sll0786 Reverse -376 -394 -2.0458 0.299
sll0047 Reverse -350 -368 4.34571 0.211
sll0045 Reverse -237 -255 8.96727 0.12
sll0044 Forward -393 -375 1.00246 0.274
sll0517 Forward -156 -138 -1.45582 0.285
slr0525 Reverse -146 -164 -1.45582 0.285
slr0536 Forward -194 -176 11.7205 0.115
sll0497 Reverse -19 -37 0.707465 0.274
slr0545 Forward -158 -140 0.707465 0.274
sll0495 Reverse -381 -399 3.26407 0.233
slr0925 Reverse -157 -175 0.0191479 0.274
slr1420 Reverse -8 -26 6.50899 0.167
slr1424 Reverse -84 -102 6.11567 0.173
sll1330 Forward -293 -275 5.23069 0.197
slr1451 Forward -147 -129 0.707465 0.274
sll1367 Forward -282 -264 -0.570838 0.274
slr0656 Forward -260 -242 -1.94747 0.299
sll0626 Reverse -200 -218 -0.275845 0.274
sll0623 Forward -140 -122 -1.45582 0.285
sll1499 Reverse -95 -113 6.41066 0.167
sll1488 Reverse -350 -368 -1.65248 0.293
sll1485 Forward -274 -256 -1.55415 0.289
slr0755 Forward -199 -181 -0.669169 0.274
sll0727 Forward -291 -273 0.707465 0.274
slr1665 Forward -304 -286 4.83737 0.211
slr1666 Reverse -315 -333 0.510803 0.274
ssr2781 Reverse -157 -175 4.9357 0.211
slr0453 Reverse -314 -332 -1.45582 0.285
sll0430 Reverse -213 -231 0.412472 0.274
slr1176 Forward -118 -100 0.412472 0.274
sll1107 Reverse -135 -153 0.21581 0.274
sll0573 Reverse -166 -184 -2.0458 0.299
slr0610 Reverse -28 -46 11.2289 0.115
sll5002 Forward -332 -314 7.00065 0.165
sll5043 Reverse -104 -122 -1.65248 0.293
slr5051 Forward -116 -98 5.13236 0.201
sll5052 Reverse -44 -62 4.34571 0.211
slr5053 Forward -175 -157 4.34571 0.211
sll5075 Forward -217 -199 4.6407 0.211
sll5089 Reverse -114 -132 -1.06249 0.28
ssr7036 Reverse -289 -307 14.7688 0.0973
sll7070 Reverse -221 -239 -1.84914 0.299
ssl7074 Reverse -105 -123 -0.275845 0.274
slr8023 Reverse -184 -202 -2.0458 0.299
sll8035 Reverse -363 -381 13.3922 0.0973
slr8037 Forward -398 -380 13.3922 0.0973
slr6110 Reverse -364 -382 -1.45582 0.285
slr6001 Reverse -254 -272 4.24738 0.211
ssr6002 Reverse -351 -369 6.41066 0.167
slr6005 Reverse -141 -159 -1.06249 0.28
slr6007 Forward -199 -181 -0.275845 0.274
slr6034 Forward -326 -308 -0.669169 0.274
sll6036 Forward -247 -229 5.91901 0.177
slr6037 Reverse -147 -165 5.91901 0.177
slr6042 Reverse -154 -172 6.41066 0.167
slr6064 Reverse -141 -159 -1.06249 0.28
slr6066 Forward -199 -181 -0.275845 0.274
ssl6092 Forward -61 -43 -0.570838 0.274
sll6109 Forward -318 -300 -1.45582 0.285
6803t05 Forward -347 -329 8.96727 0.12
6803t28 Reverse -161 -179 11.3272 0.115
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.857  0.000  0.143  
0.000 0.286 0.714 0.000
0.000 0.286 0.714 0.000
0.000 1.000 0.000 0.000
0.286 0.000 0.571 0.143
0.000 0.000 1.000 0.000
0.000 0.714 0.143 0.143
0.286 0.000 0.000 0.714
0.000 0.714 0.143 0.143
0.857 0.000 0.000 0.143
0.286 0.143 0.571 0.000
0.429 0.286 0.286 0.000
0.000 0.286 0.714 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 1.000 0.000 0.000