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Details for NP_441799.1_4

Name NP_441799.1_4
Length 20
Regular expression GC[CT]A[TA][TC][GC]A[CTG][GA]CCACCAC[CGT]AA
Central Yes

Motif logo

Genes containing this motif

134 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1406 Forward -96 -77 -1.86883 0.203
sll1400 Forward -291 -272 -5.31042 0.219
ssl2733 Forward -64 -45 -5.31042 0.219
slr1119 Reverse -273 -292 3.73603 0.119
sll1057 Forward -216 -197 -2.95047 0.203
slr1125 Forward -255 -236 5.30933 0.0864
slr0742 Forward -149 -130 1.47442 0.176
ssl2615 Reverse -241 -260 -6.39206 0.266
slr1414 Reverse -212 -231 -2.85214 0.203
sll1318 Forward -279 -260 2.94938 0.146
slr1110 Reverse -210 -229 -3.3438 0.203
slr1777 Reverse -200 -219 -3.93378 0.203
slr1780 Forward -273 -254 -5.11376 0.219
sll1669 Reverse -279 -298 -2.75381 0.203
slr1290 Forward -395 -376 -7.08038 0.297
sll1200 Forward -277 -258 -2.0655 0.203
ssl1792 Forward -204 -185 24.3855 0.00286
slr0982 Forward -288 -269 -6.39206 0.266
slr1082 Forward -89 -70 -6.09707 0.253
slr0677 Forward -274 -255 -4.81876 0.219
slr0688 Reverse -172 -191 5.30933 0.0864
slr1594 Reverse -244 -263 -4.03212 0.203
slr1044 Forward -157 -138 -6.29373 0.266
slr1052 Reverse -378 -397 -6.39206 0.266
sll1942 Reverse -362 -381 5.40766 0.0864
sll1574 Reverse -314 -333 -6.68705 0.283
sll1916 Reverse -211 -230 -5.40875 0.219
slr1140 Forward -285 -266 1.96607 0.167
sll1082 Reverse -223 -242 -5.50708 0.223
sll1072 Reverse -131 -150 -5.40875 0.219
sll1805 Reverse -281 -300 -4.81876 0.219
sll1801 Forward -49 -30 -2.65548 0.203
sll1797 Forward -312 -293 -5.9004 0.245
slr1212 Forward -364 -345 -4.22878 0.203
sll1746 Reverse -172 -191 -1.96717 0.203
sll1744 Forward -155 -136 -4.03212 0.203
slr1827 Reverse -102 -121 -5.99873 0.249
slr1543 Forward -201 -182 -0.787193 0.203
sll1452 Reverse -216 -235 5.89931 0.0864
ssl3177 Forward -259 -240 -4.22878 0.203
slr1236 Forward -110 -91 -3.04881 0.203
sll1132 Forward -122 -103 3.24438 0.139
slr1865 Reverse -242 -261 4.22769 0.117
slr1875 Forward -106 -87 -7.17871 0.297
slr1245 Forward -174 -155 1.67108 0.172
slr1250 Forward -323 -304 -4.13045 0.203
slr2059 Forward -95 -76 11.3075 0.0749
sll1606 Reverse -281 -300 -3.3438 0.203
ssl3127 Reverse -68 -87 5.99764 0.0864
ssr2898 Forward -388 -369 -3.04881 0.203
sll0238 Reverse -73 -92 -4.13045 0.203
slr1513 Reverse -305 -324 0.884433 0.194
slr2122 Forward -187 -168 -5.70374 0.231
sll1237 Forward -41 -22 8.25926 0.0864
slr1324 Reverse -65 -84 8.25926 0.0864
slr0813 Reverse -246 -265 14.0608 0.0349
sll1254 Reverse -102 -121 -1.18052 0.203
ssl3573 Reverse -171 -190 -5.11376 0.219
ssl3549 Reverse -134 -153 -4.13045 0.203
slr1972 Forward -49 -30 -4.13045 0.203
sll1866 Reverse -113 -132 -6.09707 0.253
sll1866 Reverse -107 -126 -6.39206 0.266
slr1468 Forward -215 -196 3.73603 0.119
sll1178 Forward -47 -28 -4.32711 0.205
slr1266 Reverse -83 -102 -4.32711 0.205
slr1275 Reverse -232 -251 -6.98204 0.295
sll1558 Reverse -374 -393 -5.40875 0.219
slr0954 Forward -99 -80 -3.73712 0.203
sll0427 Reverse -323 -342 -4.91709 0.219
sll0270 Reverse -335 -354 -1.86883 0.203
sll0263 Forward -277 -258 3.73603 0.119
sll0260 Reverse -350 -369 -5.11376 0.219
slr0287 Forward -229 -210 -5.11376 0.219
slr0294 Reverse -364 -383 -5.99873 0.249
slr0145 Forward -44 -25 2.75272 0.146
slr1945 Reverse -40 -59 -4.81876 0.219
ssl1807 Reverse -144 -163 -6.98204 0.295
sll0168 Forward -133 -114 3.44104 0.133
slr0379 Forward -227 -208 -6.29373 0.266
slr0776 Reverse -177 -196 -3.3438 0.203
sll0759 Forward -336 -317 -3.73712 0.203
slr0779 Reverse -206 -225 -6.09707 0.253
sll0207 Forward -125 -106 -6.88371 0.292
slr0220 Reverse -350 -369 -3.14714 0.203
slr0220 Reverse -33 -52 -6.88371 0.292
sll0204 Reverse -266 -285 -0.885524 0.203
sll0071 Forward -291 -272 -3.93378 0.203
slr0056 Reverse -274 -293 -7.08038 0.297
sll0053 Reverse -114 -133 -3.73712 0.203
ssl1300 Forward -384 -365 -1.96717 0.203
sll0613 Forward -249 -230 5.80098 0.0864
sll0379 Forward -98 -79 -4.03212 0.203
slr0196 Forward -287 -268 -5.60541 0.228
sll0555 Forward -210 -191 -3.14714 0.203
sll0553 Reverse -124 -143 -7.17871 0.297
slr0565 Forward -266 -247 -7.17871 0.297
sll0467 Reverse -181 -200 -4.6221 0.217
sll0595 Forward -181 -162 -5.40875 0.219
slr0625 Reverse -100 -119 -6.39206 0.266
sll0100 Reverse -283 -302 5.30933 0.0864
slr0110 Forward -293 -274 -5.99873 0.249
sll0280 Forward -141 -122 -4.6221 0.217
slr0711 Forward -391 -372 2.85105 0.146
sll0745 Reverse -362 -381 -4.42544 0.211
sll0744 Forward -147 -128 -7.27704 0.299
sll0518 Reverse -192 -211 -6.88371 0.292
ssr1558 Forward -364 -345 5.40766 0.0864
sll0535 Forward -400 -381 -4.22878 0.203
slr1451 Reverse -328 -347 16.8141 0.0164
sll1367 Reverse -340 -359 0.982764 0.194
sll1367 Reverse -295 -314 -5.80207 0.238
sll0629 Reverse -267 -286 -6.1954 0.26
slr0653 Forward -245 -226 -6.1954 0.26
slr0655 Reverse -371 -390 -4.13045 0.203
ssl2874 Reverse -344 -363 -1.96717 0.203
sll1479 Reverse -97 -116 -6.68705 0.283
sll0721 Forward -290 -271 -7.27704 0.299
slr1651 Forward -304 -285 -3.93378 0.203
slr0453 Reverse -377 -396 -2.85214 0.203
slr0593 Forward -183 -164 -5.11376 0.219
sll0569 Forward -260 -241 -6.58872 0.283
ssl5008 Forward -386 -367 -3.83545 0.203
sll5128 Forward -258 -239 -5.01543 0.219
sll7027 Reverse -13 -32 -3.83545 0.203
sll7050 Forward -124 -105 -5.21209 0.219
slr7052 Reverse -227 -246 -5.21209 0.219
slr7102 Forward -379 -360 -6.68705 0.283
sll8004 Reverse -110 -129 6.78429 0.0864
sll8033 Forward -281 -262 -4.52377 0.216
sll8048 Forward -211 -192 -4.13045 0.203
slr6110 Forward -378 -359 -2.65548 0.203
slr6007 Forward -294 -275 -4.03212 0.203
slr6066 Forward -294 -275 -4.03212 0.203
slr6097 Reverse -267 -286 -4.72043 0.219
sll6109 Reverse -304 -323 -2.65548 0.203
6803t15 Forward -160 -141 -6.68705 0.283
6803t41 Forward -271 -252 -5.70374 0.231
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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