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Details for NP_441782.1_5

Name NP_441782.1_5
Length 20
Regular expression CC[CG][GT][TA][CT][GCA][AT][AGC]G[CT][GCT]AT[CGT]G[TC][GT]G[TA]
Central Yes

Motif logo

Genes containing this motif

75 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1130 Reverse -300 -319 7.37428 0.287
sll0712 Forward -211 -192 8.45592 0.278
slr0740 Forward -125 -106 16.6174 0.101
slr1096 Reverse -57 -76 20.4523 0.0349
sll1659 Forward -96 -77 12.1925 0.18
slr1298 Reverse -266 -285 14.2574 0.107
sll1191 Forward -57 -38 8.06259 0.278
ssr2153 Reverse -177 -196 8.06259 0.278
sll0936 Reverse -135 -154 7.66927 0.283
slr0985 Reverse -229 -248 11.4058 0.209
sll0649 Forward -286 -267 12.9791 0.158
slr1600 Forward -241 -222 9.63589 0.256
sll1006 Reverse -21 -40 10.5209 0.238
slr1708 Reverse -142 -161 19.174 0.0465
sll1570 Reverse -205 -224 7.07928 0.287
slr2026 Reverse -311 -330 7.07928 0.287
ssl3441 Forward -326 -307 7.57094 0.283
slr1201 Forward -370 -351 12.0942 0.18
sll1715 Forward -397 -378 8.06259 0.278
sll1714 Forward -63 -44 8.06259 0.278
slr1549 Reverse -262 -281 6.88262 0.287
sll1362 Reverse -81 -100 6.88262 0.287
ssr2406 Forward -113 -94 6.88262 0.287
sll1349 Forward -380 -361 7.7676 0.283
sll0875 Reverse -279 -298 15.1424 0.107
sll0875 Forward -86 -67 6.78429 0.287
slr0876 Reverse -103 -122 6.78429 0.287
sll1307 Reverse -242 -261 14.6508 0.107
ssr3189 Reverse -43 -62 10.1275 0.242
slr1885 Reverse -336 -355 10.1275 0.242
sll0858 Reverse -15 -34 6.78429 0.287
sll0839 Forward -92 -73 9.14423 0.256
sll0839 Reverse -297 -316 7.57094 0.283
slr2060 Forward -66 -47 14.9458 0.107
slr1986 Forward -218 -199 9.73422 0.256
slr1994 Reverse -109 -128 6.68596 0.289
slr1722 Forward -396 -377 6.58763 0.289
sll1600 Reverse -348 -367 9.14423 0.256
sll0253 Reverse -381 -400 9.3409 0.256
slr1332 Forward -124 -105 6.58763 0.289
sll1261 Reverse -253 -272 12.6841 0.168
slr1275 Forward -180 -161 13.9625 0.114
slr1672 Reverse -335 -354 14.4541 0.107
slr1674 Forward -183 -164 6.39097 0.289
slr0936 Forward -131 -112 24.0905 0.0195
slr0937 Reverse -209 -228 14.3558 0.107
slr0950 Forward -155 -136 8.35759 0.278
slr1645 Forward -356 -337 22.9106 0.0195
sll0257 Reverse -213 -232 9.14423 0.256
sll0141 Reverse -287 -306 6.4893 0.289
slr0161 Forward -107 -88 6.4893 0.289
sll0136 Forward -208 -189 9.14423 0.256
slr0380 Forward -202 -183 11.1109 0.221
sll0766 Forward -105 -86 6.39097 0.289
slr0348 Reverse -301 -320 22.3206 0.0196
slr0438 Reverse -169 -188 7.86593 0.28
sll0462 Forward -38 -19 6.98095 0.287
sll0369 Forward -361 -342 11.5042 0.209
slr0900 Reverse -366 -385 7.07928 0.287
ssr1528 Forward -370 -351 7.47261 0.286
slr0079 Forward -244 -225 10.3242 0.242
slr0086 Reverse -262 -281 14.2574 0.107
slr0040 Forward -308 -289 16.2241 0.103
sll0496 Forward -177 -158 8.45592 0.278
slr0553 Forward -361 -342 6.39097 0.289
sll1342 Reverse -120 -139 10.5209 0.238
slr1423 Forward -135 -116 10.5209 0.238
sll1550 Reverse -62 -81 8.16093 0.278
slr1666 Forward -344 -325 7.96426 0.278
slr0457 Reverse -355 -374 9.14423 0.256
sll1107 Forward -267 -248 7.96426 0.278
sll5044 Forward -26 -7 14.5524 0.107
sll5049 Reverse -91 -110 8.65258 0.278
ssl7039 Forward -399 -380 7.07928 0.287
sll7070 Reverse -273 -292 14.3558 0.107
slr7102 Forward -21 -2 12.2908 0.18
6803t16 Forward -282 -263 23.1072 0.0195
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 1.000 0.000 0.000
0.000 0.800 0.200 0.000
0.000 0.000 0.500 0.500
0.300 0.000 0.000 0.700
0.000 0.600 0.000 0.400
0.200 0.300 0.500 0.000
0.800 0.000 0.000 0.200
0.500 0.200 0.300 0.000
0.000 0.000 1.000 0.000
0.000 0.700 0.000 0.300
0.000 0.200 0.600 0.200
0.900 0.000 0.100 0.000
0.000 0.000 0.000 1.000
0.000 0.600 0.200 0.200
0.000 0.000 1.000 0.000
0.000 0.300 0.000 0.700
0.000 0.100 0.600 0.300
0.100 0.100 0.800 0.000
0.200 0.000 0.000 0.800