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Details for NP_441731.1_3

Name NP_441731.1_3
Length 20
Regular expression [TG][GT][GC]A[TC]CCT[GT][GA]CGAT[CT]G[GC][TG]C[CG]
Central No

Motif logo

Genes containing this motif

225 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Reverse -301 -320 1.27776 0.226
slr0613 Reverse -323 -342 -6.68705 0.296
sll1209 Forward -271 -252 -3.44213 0.284
slr1316 Reverse -109 -128 -6.09707 0.29
sll1406 Forward -105 -86 -6.39206 0.29
ssl2069 Forward -354 -335 -3.73712 0.284
ssl2069 Forward -367 -348 -6.29373 0.29
slr0727 Forward -349 -330 -6.88371 0.299
slr0729 Reverse -192 -211 -6.39206 0.29
slr0730 Forward -366 -347 3.24438 0.164
sll0703 Forward -376 -357 -3.83545 0.284
sll0699 Forward -318 -299 0.786102 0.24
slr0240 Forward -189 -170 12.3892 0.159
slr0252 Forward -299 -280 -3.44213 0.284
sll1325 Reverse -54 -73 1.57275 0.215
sll1319 Forward -153 -134 -5.11376 0.284
sll1041 Reverse -72 -91 -6.1954 0.29
sll1039 Reverse -2 -21 4.12936 0.159
slr1095 Forward -180 -161 4.12936 0.159
ssl2009 Forward -101 -82 -4.03212 0.284
slr1780 Forward -234 -215 3.14605 0.164
sll1664 Forward -162 -143 -5.9004 0.29
sll1193 Reverse -124 -143 -0.000545616 0.271
sll1191 Reverse -294 -313 -6.1954 0.29
slr0962 Forward -114 -95 -2.65548 0.284
sll0932 Reverse -273 -292 -4.91709 0.284
sll0932 Forward -298 -279 -5.40875 0.284
slr0977 Reverse -78 -97 -3.73712 0.284
slr1074 Forward -360 -341 0.884433 0.24
sll1020 Forward -353 -334 0.884433 0.24
slr0680 Reverse -253 -272 -6.88371 0.299
slr0680 Forward -234 -215 -6.88371 0.299
sll0638 Forward -389 -370 -4.72043 0.284
slr1594 Forward -110 -91 -4.6221 0.284
sll1501 Forward -116 -97 -5.11376 0.284
sll1011 Forward -284 -265 3.83436 0.159
slr1050 Reverse -40 -59 3.83436 0.159
slr1761 Forward -131 -112 4.71934 0.159
ssr3451 Forward -361 -342 -6.88371 0.299
smr0007 Reverse -26 -45 4.32602 0.159
smr0008 Reverse -178 -197 4.32602 0.159
slr2042 Forward -59 -40 -5.50708 0.284
slr1909 Reverse -29 -48 11.7008 0.159
slr1919 Forward -167 -148 -6.09707 0.29
sll0994 Reverse -357 -376 3.44104 0.159
sll0994 Forward -112 -93 -0.688862 0.284
slr1025 Reverse -136 -155 2.65439 0.18
slr1035 Forward -265 -246 -6.09707 0.29
slr1377 Reverse -79 -98 4.12936 0.159
ssl2542 Reverse -254 -273 9.83255 0.159
sll1283 Forward -212 -193 3.44104 0.159
slr1710 Reverse -274 -293 2.55606 0.182
sll1926 Reverse -128 -147 -3.73712 0.284
slr2012 Forward -254 -235 -4.52377 0.284
slr2016 Reverse -181 -200 -6.49039 0.295
slr2023 Forward -274 -255 1.57275 0.215
slr1139 Forward -267 -248 -0.295539 0.283
sll1076 Forward -113 -94 -5.99873 0.29
ssl2084 Forward -65 -46 -6.29373 0.29
sll1822 Reverse -35 -54 0.392778 0.243
sml0006 Forward -226 -207 2.3594 0.191
slr1898 Reverse -135 -154 -3.73712 0.284
sll1123 Forward -80 -61 4.32602 0.159
sll1745 Reverse -55 -74 -6.88371 0.299
slr1547 Forward -76 -57 14.2574 0.159
slr1236 Reverse -328 -347 -4.52377 0.284
slr1435 Reverse -318 -337 -5.99873 0.29
ssr2406 Forward -388 -369 -4.52377 0.284
slr1442 Forward -188 -169 -6.58872 0.296
sll1348 Forward -189 -170 1.37609 0.222
slr0891 Forward -236 -217 -6.68705 0.296
sll0861 Forward -340 -321 7.96426 0.159
slr1853 Reverse -127 -146 -5.01543 0.284
slr1855 Forward -398 -379 -3.04881 0.284
slr1856 Reverse -115 -134 -5.31042 0.284
slr1866 Reverse -206 -225 0.491109 0.243
sll1763 Forward -251 -232 -6.58872 0.296
sll2003 Forward -162 -143 -6.58872 0.296
slr2143 Reverse -169 -188 -6.58872 0.296
slr1803 Reverse -114 -133 -3.44213 0.284
sll1703 Reverse -162 -181 -3.14714 0.284
slr1807 Forward -386 -367 -3.14714 0.284
slr1808 Forward -337 -318 -0.295539 0.283
sll1621 Forward -231 -212 -6.1954 0.29
slr1738 Reverse -80 -99 -6.1954 0.29
slr0863 Forward -66 -47 2.0644 0.197
slr1255 Forward -135 -116 -5.11376 0.284
slr1259 Reverse -288 -307 -6.78538 0.299
slr1994 Reverse -238 -257 -5.21209 0.284
sll1605 Forward -132 -113 -5.80207 0.29
slr1718 Reverse -131 -150 -5.80207 0.29
slr1719 Reverse -305 -324 -3.73712 0.284
ssl3127 Reverse -334 -353 -6.29373 0.29
slr1510 Forward -286 -267 -3.04881 0.284
slr1330 Forward -64 -45 -1.96717 0.284
slr0806 Reverse -252 -271 -2.75381 0.284
slr0813 Forward -73 -54 -5.01543 0.284
slr1344 Forward -128 -109 -4.91709 0.284
sll1250 Forward -185 -166 -5.40875 0.284
sll1244 Forward -109 -90 -5.01543 0.284
slr1353 Reverse -73 -92 -5.01543 0.284
sll1894 Reverse -329 -348 -4.03212 0.284
sll1891 Reverse -327 -346 -3.44213 0.284
sll1883 Reverse -150 -169 -6.49039 0.295
slr1980 Forward -215 -196 -4.13045 0.284
slr1471 Reverse -372 -391 -6.1954 0.29
sll1370 Reverse -339 -358 4.42435 0.159
slr1278 Reverse -356 -375 3.6377 0.159
sll1172 Reverse -167 -186 -4.72043 0.284
slr1279 Forward -116 -97 -4.72043 0.284
ssl2162 Reverse -220 -239 -5.9004 0.29
slr1164 Reverse -314 -333 -0.590531 0.284
sll1087 Reverse -242 -261 -5.11376 0.284
ssl3044 Forward -112 -93 2.16274 0.195
slr1687 Reverse -33 -52 2.16274 0.195
sll1556 Reverse -224 -243 -4.91709 0.284
slr0943 Forward -374 -355 4.22769 0.159
slr0943 Forward -96 -77 -5.40875 0.284
slr0946 Reverse -120 -139 -6.39206 0.29
slr0949 Reverse -362 -381 -4.32711 0.284
slr0950 Reverse -130 -149 -6.09707 0.29
sll1541 Reverse -248 -267 -2.16383 0.284
slr1623 Forward -84 -65 -1.7705 0.284
slr1646 Forward -356 -337 -4.6221 0.284
sll0423 Reverse -88 -107 1.67108 0.215
slr0446 Reverse -108 -127 -6.39206 0.29
sll0268 Forward -183 -164 -6.1954 0.29
sll1852 Reverse -112 -131 -4.81876 0.284
slr0323 Reverse -297 -316 7.27595 0.159
sll0301 Forward -397 -378 -6.29373 0.29
ssl0563 Forward -332 -313 0.392778 0.243
slr0331 Reverse -37 -56 0.392778 0.243
slr0184 Forward -303 -284 -4.6221 0.284
sml0001 Forward -209 -190 5.11266 0.159
sll0336 Reverse -10 -29 -6.68705 0.296
slr0769 Forward -149 -130 -4.91709 0.284
slr0775 Forward -213 -194 -4.81876 0.284
sll0767 Reverse -283 -302 -1.18052 0.284
sll0755 Forward -85 -66 -5.50708 0.284
sll0753 Reverse -135 -154 -6.88371 0.299
sll0312 Forward -104 -85 -3.83545 0.284
slr0357 Reverse -63 -82 -3.83545 0.284
sll0309 Forward -256 -237 -5.60541 0.284
sll0207 Forward -370 -351 3.04771 0.165
sll0207 Forward -248 -229 -3.04881 0.284
slr0222 Forward -262 -243 -5.80207 0.29
sll0403 Reverse -142 -161 7.47261 0.159
slr0439 Forward -169 -150 7.47261 0.159
sll0402 Reverse -277 -296 -5.70374 0.289
slr0059 Reverse -131 -150 -1.47551 0.284
sll0055 Forward -333 -314 -6.58872 0.296
sll0461 Forward -214 -195 -6.68705 0.296
slr0473 Reverse -241 -260 -6.68705 0.296
slr0474 Reverse -243 -262 3.53937 0.159
slr0479 Forward -38 -19 -5.01543 0.284
slr0492 Forward -43 -24 -1.18052 0.284
slr0634 Reverse -48 -67 -5.21209 0.284
sll0609 Forward -215 -196 -4.03212 0.284
slr0643 Forward -277 -258 -6.29373 0.29
sll0398 Reverse -288 -307 7.07928 0.159
slr0417 Forward -330 -311 -6.78538 0.299
sll0379 Reverse -336 -355 -5.80207 0.29
slr0211 Reverse -228 -247 0.491109 0.243
sll0550 Reverse -144 -163 -6.39206 0.29
sll0546 Forward -77 -58 4.42435 0.159
sgl0001 Forward -222 -203 -6.78538 0.299
slr0582 Forward -134 -115 -0.688862 0.284
slr0088 Reverse -39 -58 -6.68705 0.296
slr0090 Forward -364 -345 -5.01543 0.284
slr0093 Reverse -296 -315 -5.60541 0.284
slr0509 Forward -196 -177 -0.295539 0.283
sll0479 Reverse -120 -139 2.94938 0.166
sll0467 Reverse -144 -163 -6.78538 0.299
sll0594 Reverse -23 -42 -3.14714 0.284
slr0616 Forward -194 -175 4.62101 0.159
sll0107 Reverse -3 -22 -5.40875 0.284
slr0103 Forward -117 -98 -5.40875 0.284
slr0300 Forward -383 -364 0.982764 0.24
sll0286 Reverse -137 -156 -5.11376 0.284
slr0313 Forward -286 -267 -4.13045 0.284
slr0318 Reverse -290 -309 0.786102 0.24
ssl1464 Reverse -101 -120 -4.03212 0.284
sll0786 Forward -342 -323 -6.88371 0.299
slr0698 Forward -155 -136 -1.96717 0.284
slr0698 Forward -48 -29 -3.83545 0.284
sll0661 Forward -218 -199 -6.68705 0.296
sll0042 Forward -186 -167 -0.885524 0.284
sll0504 Forward -357 -338 5.40766 0.159
sll0901 Reverse -188 -207 0.491109 0.243
slr0554 Reverse -101 -120 1.37609 0.222
slr1421 Reverse -6 -25 -5.9004 0.29
sll1329 Reverse -331 -350 -4.6221 0.284
slr1463 Reverse -328 -347 -5.99873 0.29
sll0631 Reverse -349 -368 -1.37718 0.284
sll0631 Reverse -234 -253 -6.09707 0.29
slr1562 Reverse -84 -103 -6.29373 0.29
slr1572 Reverse -177 -196 -6.88371 0.299
slr0755 Forward -392 -373 1.0811 0.238
slr1653 Forward -135 -116 -6.68705 0.296
slr0453 Reverse -318 -337 4.32602 0.159
ssl0832 Reverse -285 -304 4.12936 0.159
ssl0832 Forward -384 -365 -4.72043 0.284
sll0436 Reverse -230 -249 -0.885524 0.284
slr0454 Forward -370 -351 4.12936 0.159
slr0454 Reverse -271 -290 -4.72043 0.284
slr0457 Forward -173 -154 -2.55715 0.284
slr1187 Reverse -285 -304 4.22769 0.159
sll0572 Reverse -302 -321 4.03102 0.159
sll0564 Forward -29 -10 -5.50708 0.284
slr0598 Reverse -16 -35 -5.50708 0.284
slr0598 Forward -148 -129 -6.29373 0.29
slr0599 Reverse -358 -377 -5.50708 0.284
slr0607 Reverse -201 -220 -1.08219 0.284
sll5057 Forward -320 -301 -5.50708 0.284
slr7011 Forward -123 -104 -3.3438 0.284
ssr7018 Forward -384 -365 -4.91709 0.284
ssr7018 Forward -311 -292 -4.91709 0.284
ssr7018 Forward -239 -220 -4.91709 0.284
ssr7018 Forward -167 -148 -4.91709 0.284
ssr7018 Forward -95 -76 -4.91709 0.284
ssr7018 Forward -26 -7 -4.91709 0.284
ssl7019 Reverse -334 -353 -4.91709 0.284
ssl7019 Reverse -260 -279 -4.91709 0.284
ssl7019 Reverse -182 -201 -4.91709 0.284
ssl7019 Reverse -108 -127 -4.91709 0.284
ssl7019 Reverse -34 -53 -4.91709 0.284
ssl7020 Reverse -335 -354 -4.91709 0.284
ssl7020 Reverse -261 -280 -4.91709 0.284
ssl7020 Reverse -188 -207 -4.91709 0.284
ssl7020 Reverse -118 -137 -4.91709 0.284
ssl7020 Reverse -45 -64 -4.91709 0.284
ssl7021 Reverse -97 -116 -4.91709 0.284
ssl7021 Reverse -29 -48 -4.91709 0.284
slr7023 Forward -390 -371 -4.91709 0.284
sll7034 Reverse -54 -73 -5.40875 0.284
ssr7035 Forward -399 -380 -5.40875 0.284
slr7081 Forward -168 -149 -4.32711 0.284
slr7092 Reverse -75 -94 -4.91709 0.284
slr7095 Forward -122 -103 -4.6221 0.284
slr7099 Forward -249 -230 -5.60541 0.284
sll8018 Reverse -198 -217 -3.3438 0.284
slr6007 Reverse -331 -350 -5.60541 0.284
slr6011 Reverse -243 -262 -6.39206 0.29
slr6044 Forward -218 -199 -5.11376 0.284
slr6066 Reverse -331 -350 -5.60541 0.284
slr6070 Reverse -243 -262 -6.39206 0.29
6803t22 Forward -214 -195 -1.27885 0.284
6803t24 Forward -134 -115 1.67108 0.215
6803t26 Forward -113 -94 -4.81876 0.284
6803t35 Forward -205 -186 4.52268 0.159
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.286  0.714  
0.000 0.000 0.714 0.286
0.000 0.286 0.714 0.000
1.000 0.000 0.000 0.000
0.000 0.429 0.000 0.571
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 0.000 0.714 0.286
0.286 0.000 0.714 0.000
0.000 1.000 0.000 0.000
0.000 0.143 0.857 0.000
0.857 0.000 0.143 0.000
0.000 0.000 0.000 1.000
0.000 0.714 0.000 0.286
0.000 0.000 1.000 0.000
0.000 0.286 0.714 0.000
0.000 0.000 0.286 0.714
0.000 1.000 0.000 0.000
0.000 0.714 0.286 0.000