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Details for NP_441719.1_6

Name NP_441719.1_6
Length 20
Regular expression [TG]TC[GC]CC[CA][AC][TA][GT]C[TC]C[CG][AT][TC][AC][TG][CG]C
Central No

Motif logo

Genes containing this motif

165 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1118 Forward -365 -346 5.2102 0.293
slr0742 Reverse -144 -163 4.42355 0.297
slr0242 Forward -152 -133 7.86512 0.269
sll0223 Reverse -333 -352 5.11187 0.293
sll1321 Reverse -280 -299 5.50519 0.29
sll1321 Forward -41 -22 5.40686 0.29
sll1321 Reverse -288 -307 4.42355 0.297
slr1413 Reverse -158 -177 5.40686 0.29
slr1416 Forward -159 -140 6.88182 0.269
slr1093 Reverse -308 -327 5.01354 0.296
sll1682 Forward -274 -255 4.42355 0.297
ssr3000 Reverse -29 -48 8.35677 0.269
slr1796 Reverse -102 -121 15.9282 0.226
ssr2142 Reverse -330 -349 4.42355 0.297
slr1305 Reverse -274 -293 12.29 0.269
ssr1604 Reverse -232 -251 4.81688 0.296
sll0943 Forward -21 -2 4.42355 0.297
slr0963 Reverse -231 -250 4.42355 0.297
sll0932 Reverse -123 -142 4.91521 0.296
slr1611 Reverse -297 -316 7.66846 0.269
sll1025 Forward -252 -233 4.62021 0.297
slr1400 Reverse -257 -276 5.89851 0.288
slr0682 Reverse -89 -108 5.60352 0.288
sll0648 Reverse -60 -79 9.24175 0.269
sll0640 Reverse -31 -50 4.91521 0.296
slr0688 Forward -45 -26 4.91521 0.296
sll1639 Forward -164 -145 12.0933 0.269
sll1833 Forward -378 -359 9.7334 0.269
slr1025 Reverse -74 -93 10.3234 0.269
slr1376 Forward -43 -24 16.4199 0.226
sll1300 Reverse -114 -133 5.60352 0.288
sll1289 Forward -243 -224 6.09517 0.288
slr1391 Reverse -245 -264 5.30853 0.293
sll1570 Reverse -54 -73 5.89851 0.288
sll1926 Reverse -72 -91 7.96345 0.269
sll1926 Forward -372 -353 5.70185 0.288
slr2005 Forward -20 -1 7.96345 0.269
sll1911 Forward -388 -369 5.11187 0.293
slr1194 Reverse -136 -155 14.3549 0.226
slr1200 Forward -276 -257 9.34008 0.269
sll1743 Forward -351 -332 6.58682 0.269
slr1827 Reverse -6 -25 8.75009 0.269
slr1238 Forward -102 -83 9.7334 0.269
slr1443 Forward -132 -113 6.48849 0.269
sll1353 Reverse -362 -381 5.11187 0.293
sll1276 Forward -22 -3 8.55343 0.269
sll1268 Forward -378 -359 7.07848 0.269
sll0871 Reverse -247 -266 5.60352 0.288
slr0884 Forward -69 -50 5.60352 0.288
sll1699 Reverse -50 -69 4.81688 0.296
sll1631 Reverse -149 -168 10.9134 0.269
sll1626 Reverse -309 -328 4.71854 0.297
slr1744 Reverse -223 -242 9.83173 0.269
slr0852 Forward -145 -126 5.11187 0.293
sll0847 Forward -78 -59 14.2566 0.226
sll1159 Reverse -266 -285 8.55343 0.269
slr1245 Forward -303 -284 8.55343 0.269
sll1906 Reverse -260 -279 4.62021 0.297
slr2004 Forward -143 -124 14.3549 0.226
slr1721 Forward -148 -129 5.99684 0.288
sll1594 Forward -35 -16 5.01354 0.296
slr1731 Forward -28 -9 9.93006 0.269
sll0247 Forward -196 -177 4.62021 0.297
slr0267 Reverse -314 -333 4.62021 0.297
sll0236 Forward -50 -31 8.75009 0.269
slr2102 Forward -128 -109 10.3234 0.269
slr1518 Forward -183 -164 7.66846 0.269
slr2122 Forward -376 -357 7.4718 0.269
sll0814 Reverse -202 -221 7.17681 0.269
ssl1507 Reverse -148 -167 10.4217 0.269
ssl3580 Reverse -196 -215 12.29 0.269
sll1888 Reverse -173 -192 12.9783 0.26
slr1972 Forward -327 -308 12.9783 0.26
sll1880 Reverse -282 -301 5.2102 0.293
sll1387 Reverse -307 -326 12.585 0.269
slr1471 Reverse -276 -295 8.94676 0.269
sll1381 Forward -107 -88 9.53674 0.269
sll1180 Reverse -142 -161 11.3067 0.269
slr1265 Forward -218 -199 11.3067 0.269
slr1288 Forward -34 -15 6.09517 0.288
slr1159 Forward -337 -318 6.68515 0.269
sll1559 Reverse -146 -165 5.40686 0.29
slr1686 Forward -145 -126 5.40686 0.29
sll0921 Forward -342 -323 7.17681 0.269
sll1531 Reverse -153 -172 4.71854 0.297
sll0420 Reverse -217 -236 10.7167 0.269
slr0401 Forward -125 -106 10.6184 0.269
sll1854 Reverse -204 -223 4.71854 0.297
sll0166 Forward -30 -11 5.2102 0.293
sll0160 Forward -304 -285 8.06178 0.269
slr0184 Reverse -239 -258 11.8967 0.269
slr0184 Reverse -296 -315 5.99684 0.288
sll0330 Forward -390 -371 5.70185 0.288
slr0383 Reverse -233 -252 5.70185 0.288
sll0754 Reverse -43 -62 7.66846 0.269
sll0319 Forward -367 -348 11.7 0.269
sll0024 Reverse -247 -266 4.81688 0.296
slr0214 Reverse -280 -299 5.89851 0.288
slr0216 Forward -247 -228 12.9783 0.26
sll0195 Reverse -158 -177 8.25844 0.269
ssl0788 Reverse -94 -113 6.48849 0.269
sll0402 Forward -339 -320 11.0117 0.269
sll0072 Reverse -227 -246 5.2102 0.293
ssr0109 Reverse -190 -209 4.81688 0.296
slr0067 Reverse -214 -233 5.80018 0.288
slr0479 Reverse -316 -335 6.1935 0.288
slr0488 Reverse -360 -379 4.62021 0.297
sll0613 Reverse -48 -67 5.70185 0.288
slr0633 Forward -154 -135 5.70185 0.288
slr0643 Forward -366 -347 5.50519 0.29
sll0606 Reverse -224 -243 6.88182 0.269
slr0650 Forward -344 -325 6.58682 0.269
sll0397 Forward -190 -171 10.9134 0.269
slr0415 Reverse -119 -138 7.86512 0.269
sll0377 Reverse -284 -303 5.40686 0.29
sll0373 Forward -291 -272 6.68515 0.269
sll0189 Forward -345 -326 10.1267 0.269
slr0922 Forward -264 -245 5.99684 0.288
slr0835 Forward -40 -21 18.3865 0.226
ssl1533 Forward -275 -256 14.2566 0.226
slr0075 Reverse -380 -399 14.6499 0.226
sll0083 Forward -93 -74 9.04509 0.269
slr0078 Reverse -124 -143 9.04509 0.269
slr0091 Reverse -268 -287 7.27514 0.269
sll0487 Forward -29 -10 10.9134 0.269
sll0482 Reverse -79 -98 9.83173 0.269
sll0100 Forward -97 -78 8.65176 0.269
slr0108 Reverse -238 -257 6.48849 0.269
slr0114 Forward -327 -308 8.16011 0.269
sll0788 Reverse -23 -42 6.98015 0.269
slr0799 Forward -199 -180 6.98015 0.269
slr0698 Reverse -111 -130 4.42355 0.297
sll0743 Reverse -213 -232 9.63507 0.269
sll0900 Reverse -132 -151 7.37347 0.269
sll0895 Forward -340 -321 16.4199 0.226
slr0546 Reverse -93 -112 16.4199 0.226
sll1336 Reverse -192 -211 5.11187 0.293
slr1457 Forward -72 -53 5.2102 0.293
sll1485 Forward -341 -322 5.80018 0.288
sll1476 Forward -343 -324 7.27514 0.269
slr0747 Reverse -371 -390 6.58682 0.269
sll0441 Reverse -271 -290 4.81688 0.296
slr0455 Reverse -194 -213 7.86512 0.269
slr0456 Reverse -237 -256 6.88182 0.269
sll1110 Reverse -40 -59 6.58682 0.269
slr1188 Forward -353 -334 13.47 0.26
ssl5015 Reverse -225 -244 4.71854 0.297
slr5018 Reverse -37 -56 4.52188 0.297
ssr5019 Reverse -365 -384 4.52188 0.297
ssl5025 Reverse -222 -241 5.89851 0.288
ssl5065 Forward -275 -256 12.88 0.26
sll5083 Reverse -299 -318 10.52 0.269
ssr5121 Reverse -223 -242 9.53674 0.269
sll7030 Forward -309 -290 8.55343 0.269
sll7030 Forward -166 -147 6.58682 0.269
sll7031 Forward -23 -4 8.55343 0.269
ssl7039 Forward -241 -222 7.07848 0.269
slr7041 Reverse -119 -138 7.07848 0.269
slr7059 Reverse -95 -114 8.25844 0.269
sll7086 Reverse -263 -282 4.91521 0.296
slr7091 Forward -230 -211 5.60352 0.288
slr7099 Forward -141 -122 7.4718 0.269
sll8049 Reverse -319 -338 4.81688 0.296
slr8016 Reverse -18 -37 6.98015 0.269
slr6039 Reverse -23 -42 6.98015 0.269
sll6093 Forward -69 -50 7.57013 0.269
slr6094 Reverse -171 -190 7.57013 0.269
6803t33 Reverse -289 -308 4.42355 0.297
6803t36 Reverse -127 -146 6.48849 0.269
6803t41 Reverse -317 -336 8.06178 0.269
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.286  0.714  
0.000 0.000 0.000 1.000
0.143 0.857 0.000 0.000
0.000 0.286 0.571 0.143
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.286 0.714 0.000 0.000
0.714 0.286 0.000 0.000
0.286 0.000 0.000 0.714
0.000 0.000 0.571 0.429
0.000 1.000 0.000 0.000
0.000 0.286 0.000 0.714
0.143 0.857 0.000 0.000
0.000 0.714 0.286 0.000
0.571 0.143 0.000 0.286
0.000 0.286 0.143 0.571
0.429 0.429 0.000 0.143
0.000 0.000 0.286 0.714
0.000 0.429 0.429 0.143
0.000 0.857 0.000 0.143