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Details for NP_441653.1_3

Name NP_441653.1_3
Length 15
Regular expression G[TC]TTTT[GT][CA][TC][GA]G[GTC][GA]GT
Central No

Motif logo

Genes containing this motif

104 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1319 Reverse -121 -135 11.406 0.3
slr0729 Forward -221 -207 15.7325 0.229
slr0744 Reverse -92 -106 17.0108 0.213
slr0237 Reverse -95 -109 11.996 0.279
slr0244 Forward -386 -372 11.406 0.3
slr1417 Forward -27 -13 12.0943 0.279
sll1681 Forward -49 -35 12.3893 0.279
sll1658 Reverse -319 -333 17.7975 0.163
sll0646 Reverse -25 -39 11.7993 0.29
ssr1155 Reverse -169 -183 14.8476 0.254
slr0689 Reverse -386 -400 14.8476 0.254
slr0689 Reverse -190 -204 14.7492 0.254
sll1298 Forward -117 -103 12.1926 0.279
ssr2315 Reverse -155 -169 12.1926 0.279
sll1812 Forward -123 -109 11.996 0.279
slr1206 Reverse -42 -56 14.7492 0.254
ssl3177 Reverse -308 -322 15.1426 0.254
slr1226 Forward -364 -350 17.7975 0.163
slr1238 Reverse -12 -26 11.5043 0.3
slr0890 Reverse -344 -358 14.5526 0.254
sll1774 Forward -301 -287 12.7826 0.279
slr1809 Reverse -62 -76 18.5841 0.145
slr0872 Reverse -315 -329 15.7325 0.229
slr1248 Reverse -227 -241 19.2725 0.145
slr1254 Forward -239 -225 11.701 0.294
sll1147 Forward -182 -168 16.8142 0.213
sll1606 Forward -316 -302 11.701 0.294
slr0263 Forward -381 -367 16.7159 0.213
sll1985 Forward -259 -245 12.0943 0.279
sll1982 Reverse -308 -322 15.7325 0.229
slr1508 Reverse -264 -278 16.0275 0.229
slr1510 Forward -254 -240 14.3559 0.258
sll1999 Forward -365 -351 12.0943 0.279
slr2114 Forward -259 -245 12.0943 0.279
sll1229 Forward -159 -145 18.4858 0.145
slr0809 Forward -233 -219 13.2743 0.279
sll0815 Forward -30 -16 13.0776 0.279
sll0813 Forward -300 -286 11.7993 0.29
slr0813 Forward -203 -189 13.7659 0.275
slr1343 Forward -254 -240 18.9775 0.145
sll1890 Reverse -315 -329 12.8809 0.279
sll1886 Forward -300 -286 15.8309 0.229
sll1167 Forward -211 -197 11.406 0.3
slr1287 Reverse -352 -366 11.406 0.3
sll1436 Reverse -209 -223 14.4542 0.256
sll1101 Reverse -307 -321 14.0609 0.265
sll1098 Reverse -267 -281 16.6175 0.213
sll1559 Forward -139 -125 13.9626 0.265
slr1686 Reverse -152 -166 13.9626 0.265
sll1556 Forward -124 -110 16.1259 0.229
slr0399 Forward -159 -145 14.9459 0.254
slr0185 Forward -63 -49 16.8142 0.213
sll0760 Reverse -231 -245 11.5043 0.3
slr0231 Forward -333 -319 12.0943 0.279
ssl0787 Reverse -335 -349 14.1593 0.265
sll0413 Forward -132 -118 20.5508 0.145
sll0071 Forward -357 -343 16.4209 0.229
sll0459 Forward -251 -237 14.9459 0.254
sll0687 Reverse -324 -338 11.5043 0.3
sll0609 Forward -18 -4 12.7826 0.279
slr0904 Forward -386 -372 17.6992 0.166
slr0906 Forward -272 -258 14.2576 0.265
sll0555 Forward -88 -74 12.4876 0.279
sll0833 Forward -37 -23 13.6676 0.279
slr0089 Reverse -188 -202 12.8809 0.279
slr0091 Reverse -131 -145 12.7826 0.279
sll0586 Forward -107 -93 13.4709 0.279
slr0623 Reverse -257 -271 13.4709 0.279
sll0584 Reverse -117 -131 14.5526 0.254
slr0624 Forward -53 -39 14.5526 0.254
sll0109 Forward -108 -94 12.0943 0.279
slr0626 Reverse -371 -385 13.3726 0.279
slr0626 Reverse -90 -104 12.0943 0.279
sll0098 Reverse -251 -265 17.1092 0.213
sll0518 Reverse -230 -244 15.7325 0.229
slr0534 Reverse -75 -89 12.291 0.279
slr0552 Forward -73 -59 12.1926 0.279
sll1336 Reverse -260 -274 18.7808 0.145
slr1456 Forward -249 -235 13.1759 0.279
slr1463 Forward -275 -261 11.6026 0.299
slr0656 Forward -163 -149 18.5841 0.145
sll0621 Reverse -245 -259 18.2892 0.145
ssr1114 Forward -40 -26 18.2892 0.145
slr0664 Forward -290 -276 18.2892 0.145
sll1483 Forward -97 -83 16.0275 0.229
sll1482 Reverse -117 -131 12.1926 0.279
sll1479 Forward -393 -379 14.6509 0.254
slr0747 Forward -218 -204 18.2892 0.145
ssr1258 Forward -51 -37 12.3893 0.279
sll0727 Reverse -362 -376 12.0943 0.279
slr1653 Forward -45 -31 13.9626 0.265
slr5053 Reverse -354 -368 19.2725 0.145
slr5116 Reverse -97 -111 11.996 0.279
sll7028 Forward -216 -202 12.0943 0.279
sll7062 Reverse -37 -51 14.8476 0.254
ssr7072 Forward -295 -281 12.8809 0.279
sll8027 Reverse -90 -104 13.1759 0.279
slr8029 Forward -346 -332 13.1759 0.279
ssl8041 Forward -259 -245 12.0943 0.279
ssr8047 Forward -381 -367 12.0943 0.279
slr6015 Forward -164 -150 15.2409 0.254
ssr6027 Reverse -50 -64 11.996 0.279
slr6028 Reverse -50 -64 11.996 0.279
slr6074 Forward -164 -150 15.2409 0.254
ssr6086 Reverse -50 -64 11.996 0.279
slr6087 Reverse -50 -64 11.996 0.279
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.125  0.875  0.000  
0.125 0.250 0.000 0.625
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000
0.000 0.125 0.125 0.750
0.000 0.000 0.125 0.875
0.000 0.125 0.625 0.250
0.250 0.750 0.000 0.000
0.000 0.250 0.000 0.750
0.375 0.000 0.625 0.000
0.000 0.000 1.000 0.000
0.000 0.250 0.375 0.375
0.250 0.000 0.750 0.000
0.000 0.125 0.875 0.000
0.000 0.125 0.000 0.875