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Details for NP_441635.1_1

Name NP_441635.1_1
Length 20
Regular expression [GA]AAAAA[TG]A[GA]ATAA[GT]TTTTTT
Central No

Motif logo

Genes containing this motif

129 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1203 Forward -207 -188 11.9838 0.236
sll1401 Forward -22 -3 3.19856 0.29
slr1116 Forward -41 -22 7.49569 0.236
ssl2069 Forward -241 -222 8.92807 0.236
ssr1853 Reverse -28 -47 8.92807 0.236
slr1129 Forward -380 -361 11.2199 0.236
sll0710 Forward -393 -374 13.5117 0.236
sll0710 Reverse -193 -212 3.48503 0.281
sll0710 Reverse -103 -122 3.10306 0.29
slr0240 Reverse -7 -26 4.05798 0.275
sll0217 Forward -105 -86 10.265 0.236
slr0257 Reverse -276 -295 10.265 0.236
slr1789 Reverse -367 -386 9.59652 0.236
slr1064 Reverse -6 -25 5.39487 0.267
slr1065 Reverse -174 -193 3.00757 0.29
slr1068 Forward -271 -252 3.67602 0.279
slr1071 Reverse -240 -259 7.87766 0.236
slr1078 Forward -111 -92 4.63094 0.272
slr1594 Forward -358 -339 7.4002 0.236
sll1514 Reverse -143 -162 10.8379 0.236
ssl2923 Reverse -274 -293 3.00757 0.29
ssl2922 Reverse -46 -65 3.00757 0.29
sll1636 Forward -34 -15 3.00757 0.29
slr1770 Reverse -259 -278 3.00757 0.29
slr2046 Forward -88 -69 3.48503 0.281
sll1929 Reverse -50 -69 3.96249 0.275
slr1032 Forward -157 -138 4.24897 0.275
sll0985 Forward -43 -24 5.87233 0.259
sll1082 Forward -65 -46 7.78217 0.236
sll1076 Forward -69 -50 4.15348 0.275
slr1210 Forward -45 -26 3.29405 0.29
slr2071 Forward -42 -23 6.34979 0.245
slr1840 Forward -72 -53 10.5514 0.236
slr1841 Reverse -90 -109 12.4613 0.236
sll1454 Reverse -302 -321 7.20922 0.245
slr1223 Forward -312 -293 6.73176 0.245
slr1241 Reverse -67 -86 3.96249 0.275
slr1437 Reverse -234 -253 7.78217 0.236
slr1443 Forward -398 -379 6.54077 0.245
sll1353 Forward -63 -44 4.24897 0.275
sll0877 Reverse -85 -104 7.4002 0.236
slr0875 Forward -42 -23 7.4002 0.236
slr0878 Reverse -101 -120 8.83258 0.236
slr1409 Reverse -25 -44 3.10306 0.29
sll1784 Forward -196 -177 4.63094 0.272
slr1862 Reverse -139 -158 15.6125 0.172
slr1866 Forward -39 -20 7.78217 0.236
slr1866 Forward -42 -23 6.2543 0.248
slr1866 Reverse -25 -44 3.67602 0.279
slr1867 Forward -323 -304 5.20389 0.27
sll1697 Reverse -301 -320 3.58052 0.281
slr1813 Forward -392 -373 3.58052 0.281
sll1626 Reverse -79 -98 3.96249 0.275
sll1621 Reverse -112 -131 15.135 0.172
slr1738 Forward -199 -180 15.135 0.172
slr0851 Forward -88 -69 4.63094 0.272
sll0837 Reverse -163 -182 7.4002 0.236
ssl0467 Reverse -86 -105 5.39487 0.267
slr2079 Reverse -78 -97 5.1084 0.27
slr2116 Reverse -173 -192 4.43995 0.275
slr2117 Forward -70 -51 4.53544 0.273
sll1239 Forward -110 -91 6.44528 0.245
slr1322 Reverse -336 -355 6.44528 0.245
sll1226 Reverse -101 -120 3.38954 0.287
sll1220 Forward -345 -326 5.0129 0.272
slr0810 Forward -125 -106 5.77684 0.259
sll1251 Forward -373 -354 8.16414 0.236
ssl2471 Forward -44 -25 8.16414 0.236
sll1897 Forward -67 -48 9.69201 0.236
ssr3341 Forward -47 -28 5.1084 0.27
sll1178 Reverse -306 -325 10.074 0.236
slr1267 Forward -386 -367 10.074 0.236
slr1272 Forward -261 -242 4.72643 0.272
sll1173 Forward -73 -54 5.1084 0.27
sll1170 Forward -90 -71 5.68135 0.264
sll1170 Forward -263 -244 4.82192 0.272
sll1169 Forward -103 -84 4.91741 0.272
slr1152 Forward -144 -125 19.7187 0.142
slr1163 Reverse -33 -52 3.67602 0.279
sll1533 Forward -164 -145 11.8883 0.236
slr1634 Reverse -109 -128 7.49569 0.236
sll0423 Reverse -144 -163 4.15348 0.275
slr0400 Reverse -103 -122 9.7875 0.236
sll0354 Reverse -90 -109 3.29405 0.29
slr0406 Forward -391 -372 3.29405 0.29
sll0141 Reverse -136 -155 7.78217 0.236
slr0161 Forward -258 -239 7.78217 0.236
sll0306 Reverse -127 -146 6.54077 0.245
sll0306 Forward -151 -132 5.58586 0.265
slr0321 Forward -334 -315 6.54077 0.245
slr0321 Reverse -310 -329 5.58586 0.265
sll0176 Reverse -101 -120 4.82192 0.272
slr0364 Forward -47 -28 3.19856 0.29
slr0383 Forward -166 -147 6.92274 0.245
ssl0601 Forward -160 -141 4.53544 0.273
slr0014 Forward -397 -378 5.39487 0.267
slr0650 Forward -94 -75 7.11373 0.245
sgl0001 Forward -50 -31 7.59119 0.236
sll0088 Forward -161 -142 8.6416 0.236
slr0074 Reverse -95 -114 8.6416 0.236
ssr0871 Forward -272 -253 15.517 0.172
slr0617 Forward -173 -154 11.7928 0.236
slr0617 Reverse -323 -342 11.1244 0.236
sll0099 Forward -90 -71 3.00757 0.29
slr0303 Forward -270 -251 7.4002 0.236
slr0304 Reverse -87 -106 6.34979 0.245
sll0779 Forward -310 -291 4.63094 0.272
sll0672 Forward -266 -247 8.54611 0.236
sll0664 Reverse -63 -82 3.19856 0.29
slr0709 Forward -103 -84 3.19856 0.29
ssl1263 Reverse -224 -243 9.31004 0.236
sll0744 Reverse -223 -242 5.39487 0.267
slr1564 Reverse -280 -299 5.96782 0.258
sll1476 Reverse -136 -155 11.2199 0.236
slr1583 Forward -46 -27 11.2199 0.236
sll0721 Forward -317 -298 5.96782 0.258
sll0450 Reverse -23 -42 7.68668 0.236
slr0593 Forward -88 -69 5.29938 0.27
ssl5001 Forward -231 -212 4.72643 0.272
slr5012 Forward -28 -9 4.63094 0.272
sll5036 Forward -76 -57 3.96249 0.275
slr5037 Reverse -42 -61 3.96249 0.275
sll7029 Forward -144 -125 6.06331 0.258
ssl7038 Forward -100 -81 3.77151 0.279
ssr7040 Reverse -319 -338 3.77151 0.279
sll7067 Forward -106 -87 6.82725 0.245
slr7068 Reverse -221 -240 6.82725 0.245
slr6013 Forward -391 -372 4.15348 0.275
ssr6024 Forward -340 -321 3.67602 0.279
ssr6024 Reverse -325 -344 3.48503 0.281
ssr6030 Reverse -83 -102 5.77684 0.259
slr6045 Forward -93 -74 10.074 0.236
slr6072 Forward -391 -372 4.15348 0.275
ssr6083 Forward -340 -321 3.67602 0.279
ssr6083 Reverse -325 -344 3.48503 0.281
ssr6089 Reverse -83 -102 5.77684 0.259
sll6093 Reverse -82 -101 5.1084 0.27
slr6094 Forward -158 -139 5.1084 0.27
6803t24 Forward -78 -59 4.15348 0.275
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.250  0.000  0.750  0.000  
1.000 0.000 0.000 0.000
0.875 0.000 0.125 0.000
0.750 0.125 0.000 0.125
0.875 0.125 0.000 0.000
0.875 0.000 0.125 0.000
0.000 0.125 0.250 0.625
0.750 0.125 0.000 0.125
0.250 0.000 0.750 0.000
1.000 0.000 0.000 0.000
0.000 0.125 0.000 0.875
1.000 0.000 0.000 0.000
0.875 0.000 0.000 0.125
0.000 0.000 0.750 0.250
0.125 0.000 0.000 0.875
0.000 0.125 0.000 0.875
0.000 0.000 0.000 1.000
0.125 0.000 0.000 0.875
0.000 0.000 0.000 1.000
0.125 0.000 0.000 0.875