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Details for NP_441604.1_4

Name NP_441604.1_4
Length 20
Regular expression TA[TC]CC[CT]TGGGC[ACT]GT[GT]GC[CTG]TT
Central No

Motif logo

Genes containing this motif

145 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1214 Forward -82 -63 2.75272 0.211
sll0716 Forward -125 -106 4.52268 0.189
slr0721 Reverse -78 -97 4.52268 0.189
slr0728 Reverse -197 -216 2.65439 0.211
sll0218 Forward -382 -363 -2.36049 0.212
sll1324 Reverse -273 -292 3.83436 0.211
sll1319 Forward -126 -107 -3.73712 0.218
sll1041 Forward -97 -78 2.94938 0.211
slr1107 Reverse -274 -293 -5.9004 0.287
slr1778 Reverse -307 -326 -4.03212 0.224
sll1680 Forward -101 -82 -6.68705 0.293
sll1670 Reverse -130 -149 -5.99873 0.287
slr1800 Forward -58 -39 -5.60541 0.283
sll1656 Reverse -119 -138 -5.50708 0.272
sll1192 Forward -320 -301 -5.31042 0.256
ssr2153 Reverse -315 -334 -5.31042 0.256
slr0971 Reverse -377 -396 -4.91709 0.247
slr0980 Reverse -101 -120 -7.08038 0.293
slr1085 Forward -293 -274 4.81767 0.189
sll1024 Reverse -171 -190 5.70265 0.189
sll1507 Reverse -362 -381 -7.08038 0.293
ssl1922 Reverse -328 -347 -5.80207 0.287
ssl1920 Reverse -140 -159 -5.80207 0.287
slr1760 Forward -347 -328 -6.68705 0.293
sll1640 Forward -330 -311 -6.98204 0.293
slr1907 Forward -310 -291 -7.08038 0.293
sll1292 Reverse -6 -25 -5.11376 0.248
sll1570 Forward -125 -106 -5.99873 0.287
slr2006 Forward -300 -281 -6.88371 0.293
slr2010 Forward -205 -186 -2.36049 0.212
ssr3409 Forward -322 -303 -5.99873 0.287
slr1137 Forward -368 -349 -5.31042 0.256
slr1149 Forward -233 -214 1.86774 0.211
sll1747 Forward -85 -66 -6.78538 0.293
sll1463 Reverse -86 -105 -6.68705 0.293
sll1462 Forward -245 -226 -6.78538 0.293
sll1452 Forward -289 -270 -6.29373 0.293
slr1437 Reverse -41 -60 -4.13045 0.224
sll1354 Forward -361 -342 -5.99873 0.287
sll1268 Forward -230 -211 -6.98204 0.293
slr0883 Forward -115 -96 -5.99873 0.287
slr1859 Forward -144 -125 -5.11376 0.248
slr1737 Forward -106 -87 -5.9004 0.287
sll0858 Reverse -264 -283 -4.32711 0.224
slr0865 Forward -73 -54 1.96607 0.211
slr1247 Forward -111 -92 -6.39206 0.293
slr1254 Forward -135 -116 -6.98204 0.293
sll1147 Reverse -251 -270 -2.75381 0.212
sll1950 Forward -164 -145 -6.49039 0.293
sll1614 Forward -35 -16 -5.21209 0.256
slr0267 Reverse -88 -107 2.26107 0.211
slr2102 Forward -54 -35 -6.49039 0.293
slr2124 Reverse -113 -132 -5.31042 0.256
slr0809 Reverse -240 -259 2.75272 0.211
ssl1520 Forward -300 -281 -6.1954 0.293
sll1262 Reverse -139 -158 -5.01543 0.248
sll1260 Forward -328 -309 -5.9004 0.287
slr1336 Reverse -155 -174 -5.9004 0.287
sll1892 Forward -306 -287 -4.6221 0.235
ssr3341 Reverse -281 -300 3.44104 0.211
sll1878 Forward -234 -215 -6.68705 0.293
sll1381 Reverse -42 -61 -5.11376 0.248
slr1280 Forward -197 -178 34.317 0.0000235
sll1440 Reverse -75 -94 -4.13045 0.224
sll1435 Forward -370 -351 -4.42544 0.228
ssl2162 Reverse -214 -233 -5.11376 0.248
slr1670 Reverse -139 -158 -6.68705 0.293
slr1673 Reverse -123 -142 -1.7705 0.212
sll1558 Forward -200 -181 -6.98204 0.293
sll1557 Reverse -298 -317 -6.39206 0.293
sll1557 Reverse -237 -256 -6.49039 0.293
slr0940 Reverse -223 -242 -6.88371 0.293
slr0943 Forward -380 -361 -4.91709 0.247
ssr2723 Forward -298 -279 -4.32711 0.224
sll0265 Forward -272 -253 -4.32711 0.224
sll0257 Reverse -373 -392 -6.68705 0.293
slr0394 Reverse -232 -251 -6.68705 0.293
sll0149 Reverse -348 -367 0.196116 0.212
sll0149 Reverse -297 -316 -3.3438 0.217
sll1860 Forward -151 -132 -6.78538 0.293
slr1933 Reverse -274 -293 -6.78538 0.293
sll0298 Reverse -79 -98 1.86774 0.211
sll0175 Reverse -144 -163 -3.63879 0.218
slr0184 Reverse -248 -267 -6.78538 0.293
sll0771 Forward -247 -228 -6.68705 0.293
slr0774 Reverse -51 -70 -6.68705 0.293
sll0767 Reverse -304 -323 -6.68705 0.293
sll0763 Forward -286 -267 -2.16383 0.212
slr0343 Forward -208 -189 -6.58872 0.293
slr0007 Forward -349 -330 -6.58872 0.293
sll0204 Forward -74 -55 1.76941 0.211
slr0222 Reverse -63 -82 1.76941 0.211
slr0232 Forward -373 -354 -6.58872 0.293
sll0072 Forward -393 -374 -6.49039 0.293
slr0058 Reverse -52 -71 2.75272 0.211
slr0060 Forward -346 -327 -3.44213 0.217
sll0461 Forward -199 -180 -6.78538 0.293
slr0473 Reverse -256 -275 -6.78538 0.293
sll0455 Forward -248 -229 -5.9004 0.287
sll0691 Reverse -354 -373 -5.99873 0.287
sll0679 Reverse -369 -388 -5.50708 0.272
sll0679 Reverse -37 -56 -6.88371 0.293
slr0719 Forward -221 -202 -6.88371 0.293
slr0633 Reverse -190 -209 -2.95047 0.212
slr0575 Forward -317 -298 3.14605 0.211
slr0575 Reverse -159 -178 -3.73712 0.218
ssr1398 Reverse -76 -95 -2.95047 0.212
ssr1399 Reverse -370 -389 -2.95047 0.212
sll0832 Reverse -151 -170 -6.68705 0.293
ssr1407 Forward -159 -140 -6.68705 0.293
sll0822 Reverse -301 -320 -6.88371 0.293
sll0822 Forward -297 -278 -7.08038 0.293
slr0848 Reverse -181 -200 -4.52377 0.228
sll0088 Reverse -207 -226 -4.03212 0.224
slr0074 Forward -49 -30 -4.03212 0.224
sll0594 Reverse -363 -382 -7.08038 0.293
sll0109 Forward -111 -92 -5.40875 0.264
slr0626 Reverse -87 -106 -5.40875 0.264
slr0303 Forward -357 -338 -4.91709 0.247
sll0786 Forward -151 -132 -6.68705 0.293
sll0676 Reverse -185 -204 1.57275 0.211
ssr1175 Forward -277 -258 1.57275 0.211
slr0527 Forward -170 -151 -4.22878 0.224
slr0545 Forward -189 -170 -6.1954 0.293
sll0493 Reverse -297 -316 4.12936 0.211
sll0898 Reverse -306 -325 -4.52377 0.228
ssl1707 Reverse -33 -52 -4.52377 0.228
sll0896 Forward -312 -293 1.86774 0.211
ssl1004 Forward -176 -157 3.24438 0.211
sll1344 Reverse -299 -318 -6.88371 0.293
sll1333 Forward -349 -330 -6.58872 0.293
sll1470 Forward -35 -16 -6.98204 0.293
slr1588 Reverse -194 -213 -6.98204 0.293
slr1653 Forward -68 -49 -4.32711 0.224
sll1550 Forward -54 -35 4.62101 0.189
slr0453 Reverse -82 -101 -4.72043 0.24
slr0456 Reverse -246 -265 0.294447 0.212
sll0574 Reverse -345 -364 -2.45882 0.212
sll5061 Reverse -330 -349 -2.55715 0.212
sll7006 Forward -45 -26 -5.99873 0.287
ssl7039 Forward -362 -343 -7.08038 0.293
ssl7042 Reverse -301 -320 0.884433 0.212
ssl7074 Reverse -109 -128 -6.68705 0.293
slr6043 Forward -227 -208 1.0811 0.212
sll6098 Forward -272 -253 24.9755 0.000379
slr6100 Reverse -205 -224 24.9755 0.000379
6803t11 Reverse -205 -224 -5.01543 0.248
6803t14 Forward -365 -346 -2.75381 0.212
6803t18 Forward -31 -12 -5.9004 0.287
6803t32 Reverse -61 -80 -3.44213 0.217
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
1.000 0.000 0.000 0.000
0.000 0.474 0.000 0.526
0.000 1.000 0.000 0.000
0.000 1.000 0.000 0.000
0.105 0.526 0.000 0.368
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.368 0.316 0.105 0.211
0.000 0.000 1.000 0.000
0.000 0.000 0.000 1.000
0.105 0.105 0.526 0.263
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.526 0.211 0.263
0.000 0.000 0.000 1.000
0.000 0.000 0.000 1.000