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Details for NP_441560.1_10

Name NP_441560.1_10
Length 20
Regular expression C[TCG][ACT][AT][GC][CA][TA]G[GT]G[CGT]G[AGT]TC[GA][CG][CT]A[CG]
Central No

Motif logo

Genes containing this motif

292 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1212 Forward -94 -75 18.3873 0.0867
slr1493 Forward -378 -359 13.5691 0.123
slr1116 Forward -237 -218 16.5191 0.0867
ssl2069 Reverse -329 -348 8.45592 0.247
sll1052 Forward -265 -246 7.47261 0.28
sll1049 Forward -346 -327 18.584 0.0867
sll0716 Forward -309 -290 12.1925 0.159
slr0731 Reverse -259 -278 15.9291 0.0867
slr0743 Forward -333 -314 11.6025 0.168
slr0743a Reverse -131 -150 6.39097 0.291
slr0242 Reverse -266 -285 9.73422 0.225
sll0218 Forward -49 -30 7.7676 0.273
sll1325 Forward -79 -60 8.35759 0.251
sll1041 Reverse -156 -175 5.99764 0.292
slr1096 Forward -82 -63 6.19431 0.292
sll1037 Forward -303 -284 7.37428 0.28
sll1032 Forward -140 -121 9.83255 0.225
sll1686 Forward -384 -365 6.78429 0.287
ssr2972 Reverse -181 -200 6.78429 0.287
slr1773 Reverse -376 -395 6.78429 0.287
slr1776 Forward -323 -304 5.01433 0.298
sll1667 Reverse -230 -249 11.3075 0.17
sll1663 Forward -391 -372 10.8159 0.188
sll1660 Forward -238 -219 17.6007 0.0867
sll1658 Forward -112 -93 16.1257 0.0867
slr1799 Reverse -34 -53 16.1257 0.0867
slr1298 Forward -291 -272 7.07928 0.287
slr1305 Forward -343 -324 6.68596 0.287
slr0971 Forward -304 -285 6.58763 0.287
slr0981 Forward -68 -49 6.98095 0.287
slr1079 Forward -37 -18 11.5042 0.169
sll1025 Forward -178 -159 17.404 0.0867
sll1023 Reverse -363 -382 11.7992 0.166
sll1022 Forward -143 -124 10.0292 0.215
sll0640 Forward -374 -355 11.3075 0.17
slr0692 Forward -240 -221 8.35759 0.251
slr1595 Forward -21 -2 5.211 0.298
sll1513 Reverse -65 -84 5.89931 0.292
sll1509 Forward -249 -230 10.4225 0.195
sll1509 Forward -137 -118 5.01433 0.298
slr1599 Reverse -117 -136 10.4225 0.195
slr1599 Reverse -229 -248 5.01433 0.298
sll1507 Forward -161 -142 6.58763 0.287
slr1045 Reverse -192 -211 8.25926 0.255
sll1006 Forward -46 -27 5.89931 0.292
sll1005 Reverse -320 -339 9.14423 0.235
sll1004 Reverse -19 -38 6.58763 0.287
ssl1918 Reverse -177 -196 5.80098 0.292
slr1753 Forward -55 -36 5.80098 0.292
sll1647 Reverse -75 -94 6.98095 0.287
slr1756 Forward -136 -117 6.98095 0.287
slr1760 Reverse -19 -38 6.58763 0.287
sll1643 Reverse -305 -324 5.01433 0.298
sll1635 Reverse -177 -196 6.39097 0.291
sml0005 Reverse -251 -270 5.80098 0.292
slr1847 Reverse -169 -188 9.24257 0.235
slr1849 Reverse -371 -390 6.29264 0.292
smr0006 Forward -231 -212 5.80098 0.292
smr0007 Forward -375 -356 5.80098 0.292
sll1934 Forward -227 -208 9.53756 0.227
slr2053 Reverse -238 -257 16.0274 0.0867
slr1909 Forward -184 -165 7.57094 0.277
sll1833 Reverse -79 -98 12.2908 0.157
sll0995 Reverse -117 -136 9.43923 0.228
slr1025 Forward -161 -142 5.89931 0.292
sll0984 Reverse -343 -362 11.7992 0.166
slr1380 Reverse -258 -277 6.58763 0.287
sll1300 Reverse -102 -121 7.66927 0.276
sll1299 Reverse -37 -56 6.58763 0.287
slr1396 Forward -358 -339 6.39097 0.291
slr1708 Forward -167 -148 5.01433 0.298
slr2017 Reverse -183 -202 8.84924 0.235
sll1920 Reverse -252 -271 6.4893 0.291
sll1911 Reverse -313 -332 9.53756 0.227
slr2030 Forward -174 -155 5.40766 0.294
sll1076 Reverse -201 -220 7.07928 0.287
sll1822 Reverse -343 -362 7.07928 0.287
sll1811 Forward -100 -81 5.211 0.298
sll1801 Forward -298 -279 5.80098 0.292
slr1902 Forward -257 -238 9.63589 0.226
sll1123 Reverse -333 -352 14.0608 0.113
sll1118 Forward -318 -299 5.01433 0.298
slr1198 Reverse -200 -219 5.01433 0.298
slr1212 Reverse -147 -166 5.50599 0.292
sll1971 Reverse -303 -322 5.70265 0.292
slr1835 Forward -216 -197 6.88262 0.287
sll1725 Reverse -149 -168 5.11266 0.298
slr1535 Reverse -283 -302 7.96426 0.266
slr1235 Reverse -61 -80 9.3409 0.234
slr1240 Reverse -319 -338 8.94757 0.235
slr1435 Forward -343 -324 16.8141 0.0867
slr1440 Forward -383 -364 13.3725 0.127
slr1443 Forward -43 -24 9.14423 0.235
sll1353 Forward -257 -238 10.6192 0.195
slr1449 Forward -380 -361 7.86593 0.272
sll1281 Forward -34 -15 6.88262 0.287
sll1274 Forward -127 -108 7.7676 0.273
slr1366 Reverse -302 -321 5.50599 0.292
ssl1633 Forward -120 -101 16.0274 0.0867
slr0883 Forward -197 -178 18.4857 0.0867
sll0871 Reverse -210 -229 6.58763 0.287
slr0884 Forward -106 -87 6.58763 0.287
sll0867 Forward -305 -286 11.7008 0.168
slr0891 Reverse -211 -230 6.29264 0.292
ssl2595 Reverse -345 -364 5.70265 0.292
sll1757 Forward -255 -236 15.9291 0.0867
slr1887 Forward -225 -206 14.2574 0.107
sll2009 Forward -181 -162 11.4058 0.17
sll2003 Reverse -137 -156 6.19431 0.292
slr2143 Forward -194 -175 6.19431 0.292
slr2144 Forward -368 -349 7.57094 0.277
sll1708 Reverse -92 -111 11.2092 0.172
slr1805 Forward -79 -60 11.2092 0.172
sll1698 Reverse -47 -66 8.75091 0.239
sll1629 Reverse -307 -326 10.4225 0.195
sll1624 Forward -276 -257 7.7676 0.273
slr1736 Forward -229 -210 16.7157 0.0867
slr1744 Forward -322 -303 9.63589 0.226
sll0848 Reverse -101 -120 8.65258 0.239
sll0839 Forward -322 -303 14.9458 0.097
slr0868 Forward -105 -86 12.8808 0.138
slr1254 Reverse -110 -129 15.5357 0.0898
sll1961 Reverse -169 -188 5.11266 0.298
sll1960 Reverse -218 -237 6.19431 0.292
sll1908 Forward -277 -258 7.37428 0.28
sll1906 Reverse -269 -288 5.50599 0.292
sll1615 Reverse -94 -113 8.84924 0.235
slr1724 Reverse -202 -221 6.39097 0.291
sll0250 Reverse -74 -93 6.09597 0.292
sll0248 Reverse -120 -139 5.11266 0.298
sll1987 Forward -304 -285 13.7658 0.118
sll1981 Forward -367 -348 5.60432 0.292
slr2099 Forward -388 -369 15.8307 0.0867
slr2102 Forward -54 -35 5.40766 0.294
slr2125 Reverse -104 -123 8.06259 0.266
sll0818 Reverse -169 -188 6.09597 0.292
slr0813 Forward -364 -345 5.60432 0.292
ssl1498 Forward -336 -317 8.75091 0.239
ssl1498 Forward -332 -313 8.65258 0.239
sll1260 Forward -360 -341 15.9291 0.0867
sll1260 Forward -130 -111 5.89931 0.292
slr1336 Reverse -123 -142 15.9291 0.0867
slr1336 Forward -23 -4 11.3075 0.17
slr1336 Reverse -353 -372 5.89931 0.292
sll1251 Forward -285 -266 7.07928 0.287
slr1350 Forward -270 -251 17.8957 0.0867
sll1244 Reverse -84 -103 14.7491 0.097
sll1244 Reverse -365 -384 11.1109 0.176
slr1353 Forward -98 -79 14.7491 0.097
slr1964 Reverse -102 -121 6.29264 0.292
sll1880 Reverse -284 -303 6.39097 0.291
slr1983 Forward -340 -321 12.6841 0.143
sll1369 Reverse -116 -135 6.88262 0.287
slr1273 Forward -158 -139 5.60432 0.292
sll1167 Reverse -248 -267 5.80098 0.292
slr1287 Forward -315 -296 5.80098 0.292
sll1444 Reverse -35 -54 5.50599 0.292
sll1432 Forward -265 -246 7.57094 0.277
slr1534 Reverse -304 -323 7.57094 0.277
sll1103 Reverse -25 -44 7.27595 0.284
sll1095 Forward -266 -247 6.88262 0.287
slr1160 Forward -300 -281 7.17762 0.287
sll1557 Reverse -286 -305 15.4374 0.0898
sll1556 Forward -249 -230 11.9958 0.159
sll0920 Reverse -286 -305 12.6841 0.143
slr0943 Reverse -349 -368 8.55425 0.243
slr0950 Forward -155 -136 7.47261 0.28
ssr2723 Forward -325 -306 5.99764 0.292
sll1528 Forward -206 -187 5.211 0.298
ssl2971 Forward -128 -109 10.1275 0.209
slr1643 Forward -93 -74 5.01433 0.298
slr1647 Forward -289 -270 16.1257 0.0867
sll0426 Reverse -25 -44 11.6025 0.168
slr0444 Forward -163 -144 11.6025 0.168
sll0424 Reverse -51 -70 5.11266 0.298
sll0418 Forward -142 -123 15.2408 0.0941
sll0360 Forward -32 -13 14.7491 0.097
ssl0707 Forward -366 -347 11.5042 0.169
slr0164 Forward -292 -273 16.5191 0.0867
sll1853 Reverse -193 -212 7.66927 0.276
slr0322 Reverse -254 -273 5.60432 0.292
slr0326 Forward -223 -204 15.6341 0.0898
slr0326 Reverse -91 -110 15.0441 0.097
slr0362 Reverse -296 -315 10.2259 0.207
slr0380 Forward -196 -177 5.99764 0.292
slr0388 Reverse -68 -87 11.0125 0.18
sll0754 Reverse -126 -145 10.1275 0.209
sll0309 Reverse -348 -367 6.39097 0.291
sll0017 Forward -281 -262 8.94757 0.235
slr0008 Forward -292 -273 5.50599 0.292
slr0009 Reverse -321 -340 9.0459 0.235
slr0018 Forward -81 -62 16.8141 0.0867
slr0216 Forward -179 -160 5.01433 0.298
slr1000 Forward -289 -270 10.4225 0.195
sll0194 Reverse -72 -91 7.07928 0.287
slr0229 Forward -321 -302 7.07928 0.287
sll0416 Forward -134 -115 6.78429 0.287
sll0409 Reverse -324 -343 6.58763 0.287
slr0438 Reverse -376 -395 9.0459 0.235
sll0402 Forward -286 -267 5.70265 0.292
ssr0109 Reverse -325 -344 5.30933 0.298
slr0059 Reverse -7 -26 5.60432 0.292
slr0069 Forward -366 -347 10.4225 0.195
slr0070 Forward -266 -247 5.30933 0.298
slr0476 Reverse -243 -262 7.66927 0.276
slr0477 Forward -357 -338 10.4225 0.195
slr0479 Reverse -13 -32 12.9791 0.138
slr0492 Forward -183 -164 8.65258 0.239
sll0456 Reverse -38 -57 5.40766 0.294
sll0683 Forward -274 -255 14.4541 0.103
sll0613 Forward -341 -322 13.4708 0.125
sll0613 Reverse -57 -76 6.78429 0.287
slr0633 Forward -145 -126 6.78429 0.287
sll0609 Reverse -190 -209 18.4857 0.0867
sll0601 Reverse -19 -38 7.96426 0.266
slr0649 Forward -366 -347 7.96426 0.266
sll0397 Forward -252 -233 5.60432 0.292
slr0415 Forward -253 -234 6.39097 0.291
sll0383 Reverse -271 -290 13.0775 0.138
sll0185 Reverse -137 -156 6.78429 0.287
ssl0350 Forward -296 -277 7.96426 0.266
sll0887 Forward -399 -380 5.211 0.298
slr0906 Forward -291 -272 6.78429 0.287
slr0909 Reverse -130 -149 5.01433 0.298
slr0579 Forward -375 -356 5.11266 0.298
sll0833 Reverse -350 -369 5.89931 0.292
ssl1533 Forward -287 -268 9.53756 0.227
slr0076 Forward -93 -74 13.7658 0.118
slr0088 Reverse -171 -190 7.96426 0.266
slr0089 Reverse -190 -209 8.55425 0.243
slr0095 Reverse -357 -376 5.70265 0.292
sll0480 Reverse -9 -28 9.14423 0.235
slr0509 Forward -174 -155 9.14423 0.235
sll0590 Reverse -202 -221 9.43923 0.228
slr0618 Forward -49 -30 9.43923 0.228
slr0104 Reverse -374 -393 6.98095 0.287
sll0289 Reverse -185 -204 9.63589 0.226
slr0299 Reverse -104 -123 7.7676 0.273
slr0301 Forward -315 -296 10.9142 0.184
ssl0511 Forward -371 -352 9.93088 0.22
sll0798 Forward -354 -335 5.80098 0.292
sll0790 Reverse -240 -259 5.89931 0.292
sll0047 Reverse -96 -115 5.50599 0.292
sll0044 Reverse -354 -373 6.39097 0.291
slr0039 Forward -389 -370 5.50599 0.292
slr0044 Reverse -194 -213 8.06259 0.266
slr0534 Forward -104 -85 9.73422 0.225
sll0501 Reverse -101 -120 11.9958 0.159
slr0541 Forward -101 -82 11.9958 0.159
slr0927 Forward -342 -323 10.6192 0.195
slr0927 Reverse -317 -336 7.47261 0.28
sll0900 Forward -90 -71 5.01433 0.298
sll0533 Reverse -249 -268 5.40766 0.294
slr0549 Forward -245 -226 5.40766 0.294
slr0557 Forward -300 -281 16.0274 0.0867
slr1420 Reverse -70 -89 8.25926 0.255
slr1420 Forward -37 -18 5.01433 0.298
slr1451 Reverse -118 -137 8.65258 0.239
slr1459 Reverse -271 -290 8.84924 0.235
sll1366 Forward -148 -129 12.3892 0.154
slr0654 Forward -96 -77 7.37428 0.28
sll0626 Reverse -204 -223 23.1072 0.0594
slr0665 Reverse -341 -360 7.27595 0.284
sll1470 Reverse -10 -29 6.09597 0.292
slr1588 Forward -219 -200 6.09597 0.292
slr0752 Reverse -164 -183 5.89931 0.292
ssr1256 Reverse -362 -381 10.5209 0.195
slr0755 Forward -215 -196 7.07928 0.287
slr1653 Forward -222 -203 7.37428 0.28
slr1653 Reverse -110 -129 5.80098 0.292
ssr2781 Forward -224 -205 6.58763 0.287
sll0445 Forward -298 -279 5.70265 0.292
sll0436 Forward -302 -283 7.37428 0.28
slr0456 Reverse -246 -265 5.50599 0.292
slr0459 Reverse -281 -300 14.4541 0.103
slr0585 Reverse -283 -302 13.8641 0.118
sll0572 Reverse -302 -321 8.45592 0.247
slr0593 Forward -150 -131 9.0459 0.235
sll0564 Forward -226 -207 12.8808 0.138
slr0599 Reverse -161 -180 12.8808 0.138
slr0605 Reverse -49 -68 5.70265 0.292
sll5002 Forward -102 -83 8.94757 0.235
slr5021 Forward -126 -107 6.09597 0.292
sll5047 Forward -320 -301 12.5858 0.146
sll5052 Forward -241 -222 9.73422 0.225
sll5059 Forward -233 -214 5.40766 0.294
sll5081 Reverse -354 -373 8.84924 0.235
slr5082 Forward -136 -117 8.84924 0.235
ssl5100 Reverse -352 -371 11.9958 0.159
slr5102 Forward -299 -280 11.9958 0.159
ssl5108 Forward -59 -40 9.14423 0.235
ssl7039 Forward -362 -343 19.9606 0.0867
sll7050 Forward -127 -108 5.50599 0.292
slr7052 Reverse -224 -243 5.50599 0.292
sll7070 Forward -298 -279 5.11266 0.298
ssl7074 Reverse -109 -128 6.19431 0.292
sll8004 Reverse -365 -384 5.11266 0.298
sll8033 Forward -322 -303 5.211 0.298
slr8045 Reverse -136 -155 6.29264 0.292
sll6059 Forward -291 -272 5.99764 0.292
6803t13 Reverse -156 -175 16.2241 0.0867
6803t16 Forward -189 -170 9.0459 0.235
6803t16 Reverse -257 -276 5.01433 0.298
6803t18 Forward -63 -44 15.9291 0.0867
6803t18 Reverse -163 -182 11.3075 0.17
6803t32 Forward -20 -1 5.60432 0.292
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.875  0.125  0.000  
0.125 0.250 0.250 0.375
0.375 0.375 0.000 0.250
0.625 0.000 0.125 0.250
0.125 0.375 0.500 0.000
0.250 0.750 0.000 0.000
0.375 0.000 0.000 0.625
0.000 0.000 1.000 0.000
0.000 0.000 0.750 0.250
0.000 0.125 0.875 0.000
0.000 0.375 0.375 0.250
0.000 0.000 1.000 0.000
0.375 0.000 0.375 0.250
0.000 0.125 0.000 0.875
0.000 0.875 0.000 0.125
0.250 0.000 0.750 0.000
0.000 0.750 0.250 0.000
0.000 0.750 0.000 0.250
0.875 0.000 0.000 0.125
0.000 0.500 0.500 0.000