Your browser is old and dusty. Try Google Chrome!

Details for NP_441539.1_1

Name NP_441539.1_1
Length 15
Regular expression [TG][GA]T[TA]AA[GT][TA]T[TA]T[GAT]C[TA]A
Central Yes

Motif logo

Genes containing this motif

140 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Forward -158 -144 13.5686 0.284
slr1489 Reverse -61 -75 14.2569 0.284
sll0710 Reverse -316 -330 12.782 0.284
slr0734 Forward -349 -335 12.2903 0.284
sll0230 Forward -251 -237 12.782 0.284
ssr0390 Forward -121 -107 14.3553 0.284
sll1041 Reverse -99 -113 14.0603 0.284
sll1658 Reverse -32 -46 10.6187 0.3
slr1799 Forward -114 -100 10.6187 0.3
slr1301 Forward -176 -162 14.5519 0.284
slr0977 Reverse -7 -21 18.1901 0.284
slr0984 Reverse -366 -380 16.2235 0.284
slr1082 Forward -118 -104 15.3386 0.284
slr1083 Forward -40 -26 10.8154 0.294
sll1502 Reverse -61 -75 13.077 0.284
ssr2708 Forward -161 -147 13.077 0.284
sll1001 Reverse -280 -294 10.717 0.294
slr1753 Forward -268 -254 10.717 0.294
sll1635 Forward -392 -378 12.0937 0.284
sml0005 Forward -57 -43 12.0937 0.284
slr2037 Reverse -306 -320 10.717 0.294
slr1909 Reverse -4 -18 15.4369 0.284
sll1834 Reverse -160 -174 14.4536 0.284
slr1915 Forward -340 -326 14.4536 0.284
sll1832 Reverse -168 -182 11.5037 0.285
sll1583 Forward -123 -109 12.487 0.284
sll1080 Reverse -13 -27 15.8302 0.284
sll1823 Reverse -354 -368 14.5519 0.284
ssl3446 Reverse -20 -34 14.5519 0.284
sll1797 Forward -221 -207 13.6669 0.284
ssr2016 Reverse -113 -127 11.4053 0.285
slr2076 Forward -93 -79 11.7987 0.285
ssl3712 Reverse -354 -368 10.6187 0.3
sll1730 Reverse -121 -135 11.4053 0.285
slr1834 Forward -295 -281 11.4053 0.285
slr1219 Forward -173 -159 12.487 0.284
slr1230 Reverse -145 -159 14.5519 0.284
ssl2245 Reverse -220 -234 12.6836 0.284
sll1270 Reverse -137 -151 14.6503 0.284
sll0876 Forward -187 -173 13.6669 0.284
sll0869 Forward -213 -199 10.8154 0.294
sll1697 Reverse -85 -99 15.0436 0.284
slr1811 Forward -39 -25 15.0436 0.284
sll0249 Reverse -134 -148 11.1104 0.285
slr1512 Reverse -245 -259 19.0751 0.269
sll1239 Forward -347 -333 12.0937 0.284
slr1322 Reverse -99 -113 12.0937 0.284
sll1232 Reverse -137 -151 11.1104 0.285
slr0804 Reverse -254 -268 14.0603 0.284
sll0811 Forward -157 -143 10.717 0.294
sll1261 Reverse -13 -27 14.5519 0.284
sll1875 Forward -70 -56 17.6985 0.284
sll1376 Reverse -5 -19 11.9953 0.284
sll1372 Reverse -2 -16 12.3887 0.284
sll1096 Reverse -201 -215 12.9786 0.284
slr1670 Forward -210 -196 13.8636 0.284
ssl3044 Reverse -128 -142 12.3887 0.284
slr1687 Forward -17 -3 12.3887 0.284
slr1692 Reverse -51 -65 15.9285 0.284
slr1636 Reverse -251 -265 10.717 0.294
sll1524 Forward -195 -181 11.9953 0.284
slr1644 Reverse -130 -144 11.9953 0.284
sll0263 Reverse -154 -168 11.2087 0.285
sll0262 Reverse -78 -92 10.9137 0.294
slr0285 Reverse -194 -208 12.192 0.284
sll0359 Forward -25 -11 11.2087 0.285
slr0397 Reverse -309 -323 11.2087 0.285
ssl0259 Forward -334 -320 13.4703 0.284
ssl0259 Forward -320 -306 11.602 0.285
slr0156 Reverse -259 -273 13.4703 0.284
slr0156 Reverse -273 -287 11.602 0.285
slr1925 Reverse -1 -15 12.782 0.284
slr1929 Reverse -55 -69 14.0603 0.284
sll1852 Forward -40 -26 12.3887 0.284
ssl1807 Forward -350 -336 13.5686 0.284
sll0293 Reverse -25 -39 11.897 0.284
slr0338 Forward -204 -190 11.897 0.284
slr0352 Forward -284 -270 10.717 0.294
sll0315 Forward -271 -257 14.1586 0.284
slr0357 Reverse -261 -275 11.2087 0.285
sll0413 Reverse -322 -336 13.1753 0.284
slr0060 Forward -69 -55 17.6002 0.284
slr0496 Forward -271 -257 11.7987 0.285
sll0606 Forward -161 -147 11.012 0.287
slr0646 Forward -339 -325 11.1104 0.285
slr0650 Reverse -83 -97 11.9953 0.284
slr0650 Reverse -41 -55 11.897 0.284
sll0396 Forward -34 -20 13.4703 0.284
slr0423 Forward -198 -184 12.5853 0.284
slr0915 Reverse -363 -377 11.2087 0.285
slr0919 Reverse -386 -400 11.1104 0.285
sll0549 Forward -17 -3 13.9619 0.284
slr0569 Reverse -279 -293 13.9619 0.284
slr0081 Reverse -167 -181 11.012 0.287
sll0487 Forward -175 -161 14.5519 0.284
slr0506 Reverse -99 -113 12.8803 0.284
slr0517 Reverse -35 -49 13.9619 0.284
sll0469 Forward -131 -117 11.7003 0.285
slr0523 Reverse -40 -54 11.7003 0.285
sll0586 Forward -80 -66 12.0937 0.284
slr0623 Reverse -284 -298 12.0937 0.284
sll0284 Reverse -166 -180 21.5334 0.0585
ssl1263 Forward -150 -136 21.8284 0.0585
sll0040 Forward -140 -126 13.372 0.284
sll0039 Reverse -131 -145 11.602 0.285
sll0502 Reverse -200 -214 15.8302 0.284
sll1343 Reverse -153 -167 12.192 0.284
sll1341 Forward -25 -11 16.5185 0.284
sll1367 Forward -172 -158 10.8154 0.294
slr1452 Reverse -57 -71 10.8154 0.294
sll1491 Reverse -123 -137 14.3553 0.284
slr1576 Forward -33 -19 13.1753 0.284
slr1577 Forward -396 -382 13.1753 0.284
sll1481 Forward -303 -289 11.1104 0.285
sll1477 Reverse -216 -230 11.5037 0.285
sll1475 Reverse -306 -320 10.717 0.294
sll0732 Reverse -367 -381 14.8469 0.284
slr0753 Forward -183 -169 14.8469 0.284
sll0567 Forward -142 -128 12.487 0.284
slr0596 Reverse -1 -15 12.487 0.284
slr0597 Forward -328 -314 13.372 0.284
slr5005 Forward -50 -36 12.9786 0.284
sll5033 Reverse -294 -308 11.012 0.287
slr5051 Forward -223 -209 12.192 0.284
ssl5070 Forward -58 -44 14.9452 0.284
slr5078 Reverse -52 -66 21.8284 0.0585
ssr5117 Forward -187 -173 14.8469 0.284
sll5130 Reverse -306 -320 10.717 0.294
sll7070 Forward -131 -117 13.8636 0.284
slr7071 Reverse -1 -15 13.8636 0.284
slr7083 Reverse -75 -89 13.9619 0.284
sll7087 Reverse -326 -340 17.0102 0.284
slr7099 Reverse -53 -67 11.5037 0.285
slr7100 Reverse -186 -200 11.2087 0.285
ssl6023 Reverse -46 -60 12.0937 0.284
ssr6024 Forward -107 -93 12.0937 0.284
ssl6082 Reverse -46 -60 12.0937 0.284
ssr6083 Forward -107 -93 12.0937 0.284
slr6106 Reverse -306 -320 10.717 0.294
6803t26 Reverse -185 -199 12.3887 0.284
6803t27 Forward -78 -64 13.5686 0.284
6803t32 Reverse -338 -352 17.6002 0.284
6803t34 Reverse -308 -322 11.2087 0.285
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.100  0.000  0.200  0.700  
0.300 0.000 0.700 0.000
0.100 0.000 0.000 0.900
0.400 0.100 0.000 0.500
0.900 0.100 0.000 0.000
1.000 0.000 0.000 0.000
0.000 0.000 0.800 0.200
0.200 0.000 0.000 0.800
0.000 0.000 0.000 1.000
0.200 0.000 0.000 0.800
0.000 0.000 0.000 1.000
0.200 0.000 0.600 0.200
0.000 1.000 0.000 0.000
0.400 0.100 0.000 0.500
0.900 0.000 0.100 0.000