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Details for NP_441526.1_6

Name NP_441526.1_6
Length 20
Regular expression [GA][TC]GGG[GC]G[TA][TCG][GA][GC][AG]GT[CG]G[AT][GT]GC
Central No

Motif logo

Genes containing this motif

187 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1319 Reverse -42 -61 3.83436 0.271
slr1492 Reverse -318 -337 9.63589 0.258
slr1124 Reverse -44 -63 6.98095 0.258
slr1130 Reverse -241 -260 4.42435 0.271
slr0722 Reverse -142 -161 5.70265 0.265
slr0729 Forward -354 -335 2.94938 0.271
slr0732 Forward -364 -345 3.04771 0.271
slr0741 Reverse -342 -361 5.40766 0.265
slr0250 Reverse -349 -368 2.55606 0.283
slr0251 Reverse -60 -79 7.07928 0.258
slr1411 Reverse -240 -259 7.07928 0.258
slr1417 Reverse -81 -100 11.2092 0.258
sll1031 Forward -256 -237 9.3409 0.258
slr1776 Forward -397 -378 5.211 0.268
sll1685 Forward -188 -169 3.04771 0.271
slr1784 Reverse -263 -282 4.62101 0.271
sll1654 Forward -355 -336 2.3594 0.289
ssr2142 Reverse -90 -109 2.0644 0.295
sll1194 Forward -394 -375 4.42435 0.271
slr1083 Reverse -359 -378 1.76941 0.297
slr1087 Forward -232 -213 7.27595 0.258
slr0679 Reverse -90 -109 1.86774 0.297
slr0689 Reverse -110 -129 3.34271 0.271
slr1594 Forward -260 -241 3.53937 0.271
sll1507 Reverse -130 -149 5.60432 0.265
sll1501 Forward -131 -112 8.75091 0.258
sll1501 Forward -125 -106 2.16274 0.295
slr1042 Reverse -90 -109 4.12936 0.271
slr1042 Reverse -316 -335 2.0644 0.295
slr1043 Forward -322 -303 7.17762 0.258
slr1052 Forward -332 -313 1.96607 0.295
slr1763 Reverse -127 -146 2.94938 0.271
sll1939 Forward -235 -216 3.24438 0.271
sll1933 Forward -209 -190 12.6841 0.219
slr1913 Forward -81 -62 3.34271 0.271
sll1831 Forward -187 -168 2.85105 0.271
sll0995 Reverse -260 -279 3.34271 0.271
sll0993 Forward -357 -338 1.86774 0.297
sll0992 Reverse -88 -107 3.24438 0.271
sll0981 Reverse -328 -347 5.30933 0.268
slr1379 Reverse -323 -342 8.65258 0.258
slr1379 Forward -80 -61 4.52268 0.271
sll1300 Forward -289 -270 6.4893 0.265
sll1289 Reverse -48 -67 7.47261 0.258
slr1390 Forward -53 -34 7.47261 0.258
slr2031 Reverse -28 -47 1.96607 0.295
slr1145 Forward -304 -285 5.60432 0.265
sll1068 Forward -174 -155 2.94938 0.271
slr1890 Reverse -239 -258 2.94938 0.271
sll1824 Forward -229 -210 7.66927 0.258
sll1815 Forward -209 -190 5.80098 0.265
sll1814 Forward -131 -112 5.211 0.268
sll1812 Reverse -345 -364 1.96607 0.295
sll1804 Reverse -54 -73 13.5691 0.219
sll1787 Forward -190 -171 6.58763 0.265
sll1123 Forward -80 -61 3.83436 0.271
sll1120 Reverse -134 -153 3.04771 0.271
sll1119 Reverse -7 -26 4.22769 0.271
slr1194 Forward -136 -117 4.22769 0.271
slr1208 Forward -338 -319 4.12936 0.271
sll1968 Reverse -351 -370 13.6675 0.219
sll1968 Reverse -357 -376 3.53937 0.271
sll1734 Reverse -51 -70 11.2092 0.258
ssr2611 Reverse -54 -73 8.16093 0.258
slr1550 Reverse -307 -326 8.16093 0.258
sll1138 Forward -203 -184 2.3594 0.289
slr1240 Forward -323 -304 14.0608 0.219
slr1443 Reverse -234 -253 2.85105 0.271
slr1448 Reverse -264 -283 12.8808 0.219
sll1280 Reverse -23 -42 4.03102 0.271
slr1356 Forward -371 -352 4.03102 0.271
slr1363 Forward -342 -323 5.80098 0.265
slr1368 Forward -47 -28 2.16274 0.295
sll0867 Reverse -244 -263 3.73603 0.271
slr1853 Forward -112 -93 5.89931 0.265
sll1765 Forward -148 -129 7.27595 0.258
sll1764 Forward -185 -166 6.88262 0.258
sll2002 Reverse -339 -358 4.12936 0.271
sll1620 Forward -328 -309 3.34271 0.271
slr1992 Forward -298 -279 12.9791 0.219
slr2003 Forward -244 -225 4.42435 0.271
slr1721 Reverse -218 -237 2.75272 0.275
ssl0452 Reverse -268 -287 2.85105 0.271
slr0271 Forward -316 -297 2.85105 0.271
sll1987 Reverse -146 -165 5.01433 0.27
slr2087 Forward -58 -39 5.01433 0.27
slr2099 Reverse -108 -127 3.73603 0.271
slr2122 Reverse -266 -285 3.73603 0.271
sll1229 Reverse -362 -381 5.40766 0.265
sll1220 Forward -141 -122 6.68596 0.265
slr0807 Forward -324 -305 3.93269 0.271
slr0818 Reverse -335 -354 8.94757 0.258
slr0818 Forward -161 -142 4.81767 0.271
sll1252 Forward -282 -263 3.73603 0.271
sll1245 Forward -396 -377 9.93088 0.258
slr1353 Reverse -290 -309 7.57094 0.258
ssl2717 Reverse -147 -166 5.89931 0.265
slr1468 Forward -122 -103 2.55606 0.283
slr1276 Forward -321 -302 1.96607 0.295
sll1435 Forward -205 -186 5.01433 0.27
sll1101 Forward -174 -155 3.04771 0.271
sll1099 Forward -101 -82 3.44104 0.271
slr1171 Forward -226 -207 6.09597 0.265
ssr2831 Forward -137 -118 6.88262 0.258
slr1689 Forward -396 -377 6.88262 0.258
sll0920 Forward -350 -331 9.14423 0.258
slr0955 Reverse -362 -381 2.3594 0.289
ssr2723 Reverse -335 -354 2.85105 0.271
sll1522 Forward -358 -339 3.73603 0.271
sll0420 Forward -378 -359 1.76941 0.297
sll0272 Reverse -295 -314 3.44104 0.271
slr0398 Reverse -176 -195 13.5691 0.219
sll1854 Reverse -68 -87 2.0644 0.295
sll0177 Reverse -294 -313 2.85105 0.271
sll0160 Reverse -282 -301 2.94938 0.271
slr0361 Forward -194 -175 2.3594 0.289
slr0380 Forward -383 -364 10.4225 0.258
ssl1417 Forward -230 -211 9.63589 0.258
ssl1417 Forward -248 -229 4.71934 0.271
slr0350 Reverse -233 -252 7.17762 0.258
slr0356 Forward -281 -262 1.96607 0.295
sll0019 Reverse -172 -191 5.40766 0.265
slr0214 Reverse -256 -275 1.76941 0.297
slr0217 Forward -299 -280 3.53937 0.271
slr0232 Reverse -93 -112 3.83436 0.271
ssl0788 Reverse -332 -351 7.7676 0.258
ssl0787 Reverse -27 -46 7.7676 0.258
sll0408 Reverse -208 -227 5.211 0.268
slr0055 Forward -360 -341 3.83436 0.271
slr0069 Forward -240 -221 5.01433 0.27
sll0461 Reverse -337 -356 4.22769 0.271
slr0473 Forward -118 -99 4.22769 0.271
slr0480 Reverse -73 -92 9.93088 0.258
sll0690 Reverse -95 -114 8.35759 0.258
sll0688 Forward -182 -163 4.22769 0.271
sll0611 Reverse -289 -308 4.62101 0.271
slr0645 Reverse -239 -258 8.06259 0.258
ssl0750 Forward -328 -309 2.94938 0.271
sll0379 Reverse -303 -322 8.55425 0.258
sll0189 Reverse -220 -239 15.1424 0.219
sll0189 Reverse -214 -233 9.14423 0.258
slr0904 Forward -316 -297 4.22769 0.271
slr0923 Reverse -207 -226 6.19431 0.265
sll0545 Reverse -20 -39 1.76941 0.297
sll0832 Forward -353 -334 5.80098 0.265
slr0833 Reverse -225 -244 5.80098 0.265
sll0830 Reverse -149 -168 2.16274 0.295
slr0839 Reverse -317 -336 8.25926 0.258
ssl1533 Forward -360 -341 2.85105 0.271
sll0084 Reverse -40 -59 3.93269 0.271
slr0096 Forward -127 -108 5.11266 0.27
slr0502 Reverse -343 -362 6.98095 0.258
slr0521 Reverse -221 -240 2.0644 0.295
slr0114 Reverse -205 -224 15.5357 0.219
slr0300 Forward -383 -364 3.04771 0.271
sll0800 Reverse -93 -112 3.83436 0.271
sll0790 Reverse -304 -323 4.71934 0.271
sll0664 Reverse -295 -314 3.34271 0.271
slr0710 Forward -392 -373 3.34271 0.271
sll0048 Forward -235 -216 3.6377 0.271
slr0022 Reverse -217 -236 3.6377 0.271
sll0045 Forward -72 -53 5.40766 0.265
slr0023 Reverse -10 -29 5.40766 0.265
sll0030 Forward -360 -341 5.70265 0.265
slr0043 Forward -380 -361 1.96607 0.295
sll0505 Reverse -13 -32 5.70265 0.265
ssl1707 Reverse -198 -217 5.40766 0.265
sll0897 Forward -178 -159 3.93269 0.271
sll1342 Reverse -258 -277 5.70265 0.265
sll1498 Forward -268 -249 6.98095 0.258
sll1496 Forward -311 -292 9.83255 0.258
slr1565 Forward -215 -196 5.40766 0.265
slr1572 Forward -338 -319 6.39097 0.265
ssl0832 Forward -295 -276 3.24438 0.271
slr0454 Reverse -360 -379 3.24438 0.271
slr0456 Reverse -170 -189 5.89931 0.265
slr1183 Reverse -227 -246 4.03102 0.271
slr1186 Reverse -289 -308 2.75272 0.275
slr1188 Reverse -332 -351 4.42435 0.271
slr0596 Reverse -361 -380 4.52268 0.271
slr0602 Forward -149 -130 2.85105 0.271
slr0603 Forward -178 -159 2.45773 0.289
slr5010 Reverse -199 -218 1.86774 0.297
sll5030 Forward -89 -70 2.55606 0.283
slr7060 Reverse -208 -227 5.60432 0.265
sll7070 Forward -389 -370 3.44104 0.271
ssr7084 Reverse -57 -76 3.14605 0.271
ssr6032 Forward -375 -356 5.80098 0.265
slr6033 Forward -394 -375 5.80098 0.265
slr6041 Reverse -304 -323 4.71934 0.271
slr6102 Reverse -96 -115 3.44104 0.271
6803t01 Reverse -254 -273 6.58763 0.265
6803t13 Forward -367 -348 17.0107 0.219
6803t17 Reverse -296 -315 4.71934 0.271
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.286  0.000  0.714  0.000  
0.143 0.286 0.000 0.571
0.000 0.143 0.857 0.000
0.000 0.000 1.000 0.000
0.000 0.000 1.000 0.000
0.000 0.429 0.571 0.000
0.000 0.000 1.000 0.000
0.286 0.000 0.000 0.714
0.000 0.286 0.286 0.429
0.286 0.000 0.714 0.000
0.000 0.286 0.714 0.000
0.571 0.000 0.286 0.143
0.143 0.000 0.857 0.000
0.143 0.000 0.000 0.857
0.000 0.571 0.286 0.143
0.000 0.000 1.000 0.000
0.571 0.000 0.143 0.286
0.000 0.143 0.429 0.429
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000